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The map label for this gene is dppA [C]

Identifier: 83593349

GI number: 83593349

Start: 2328282

End: 2329886

Strand: Reverse

Name: dppA [C]

Synonym: Rru_A2014

Alternate gene names: 83593349

Gene position: 2329886-2328282 (Counterclockwise)

Preceding gene: 83593352

Following gene: 83593348

Centisome position: 53.53

GC content: 63.55

Gene sequence:

>1605_bases
ATGTCCCTGTCCCGCAGAAGTTTTCTTGCCTCAACCGCCCTTCTGGCGGGAGCGGCGGCCCTGCCGCGTTTCTCCTGGGC
GCAGGGCGCCCCGGCGCCGGTCGCCGGCGGCGTGTTGACCGCCCATCTCAGTTCCGAGCAGCGCATCCTCAATCCGGCGC
TGCGCGCCTCGACGGGGGTCTATGTCATCACCAGCAAGATCATCGAATCGCTGGTTGATCTTGGCCCCGATGGCGCGCCG
ACGCCGGTTCTCGCCACGCGTTGGGAGGCCGCCGCCGATGGCAAATCGGTGACCTTCACCCTGCGCGAGGGGGTGAAGTG
GCACGACGGCAAGCCCTTCACCTCGGCCGACGTTCAGTATTCGGCGATGGAGCTGTGGAAGAAGCACCTGAATTACGGCA
CCCAGCTTCAGCGCTATCTGGAAGCCGTCGACACCCCCGACGCCACCACGGCGATCTTCCGCTATAGCCGGACCATGCCG
CTGCCCCTGTTGCTGCGCGCCCTGGCCGATCTGGGCTATGTCGTGCCGCGCCATCTGTTCGAGGGCACCAACGTTCTGGA
AAACCCGGCGAATACGGCGCCGATCGGTACCGGTCCGTTCAAATTCGTCGAATACCAGCGCGGCCAGTATATCGTCGCCG
AGCGCAATCCCGAGTATTGGCGGAAGGGCGAACCCTATCTCGACCGCGTCGTCTGGCGCTTCATCACCGATAAATCGGCC
GCCAGCGCCGCCCTGGAAACCGGGCAGGTGCAGATCAGCGCCTATACCCAGCTCGCCCTGTCGGACATCGAACGCCTGGC
CAAGGATTCGCGCTTCGAGGTGTCGTCGCGCGGCAACGAGGCCAATTCGTTCAACAATACGGTCGAGTTCAACCATCGCC
GCAAGGAACTGGCCGATGTCCGCGTCCGCCGCGCCATCGCCCATGCCGTCGATGTCGATTTCTTCGTCGAGAACTTCCTC
TATGGGCGCGGCAAGCGGGCGACCGGCTTCATCCCGTCGATTTCCCAGGCCTTTTATCCGGGCGGCGCCTTCCCCTATCC
GTTTGACACCAAGAAGGCCGAGGCCCTGCTCGACGAGGCCGGCTATCCGCGCCAAAAGGGCGGCGAGCGCTTTTCGCTGC
GCCTGTTGCCGATCCTGAACGGCGAGGATGTGCCCCAGTTCGCCACCTTCCTTCAGCAGTCGCTGGCCGAGGTCGGCATC
AAGGTCGAGATCGTCCAGCTTGATGTCGCTGGCGCCCTGTCGGCGATCTACAAGGATTGGAACTTCGATCTGGCGACCGG
CTGGCACCAGTATCGGGGCGATCCGGCGGTGTCGACCACCGTGTGGTTCCGCTCGGGTAGCCCCAAGGGCGCGCCGTGGA
CCAACCAGTTCGGTTGGGAATCGGCCGAGGTCGATACGCTGATCGACGATGCCGCCGCCGAGATCGATCCGGTCAAGCGC
AAGGCCCTTTACGCCCAATTGGTCGATGTGATCAACGAAGAGTTGCCGGTGTGGTTCGCCACCGAGCGGCAATTCGTGTC
GGTCACCAATAAAGTCGTCCAAAACCACCATAATATCCCGCGCTGGCCGTCCAGTGACTGGCATGATACCTGGATTGCCA
AGTAG

Upstream 100 bases:

>100_bases
GGGGTGCCGTCCTCCCCCGCGATCGCCGACCGAATCATCCCCTTCCCCTGTCCCTCTCTCTGCCGCTTTTCCTTCTCTCT
TTGTATGAAGGTTCCCCCCT

Downstream 100 bases:

>100_bases
GATTTACCATCGGGGTCGGCGGGCCGCTTTCGGGTGGCCCGCCAGAGTGAAAATCGGACGATTTCATGAGCCTTTTCCTG
TTCGCCCTGCGCCGGTTGGC

Product: twin-arginine translocation pathway signal

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MSLSRRSFLASTALLAGAAALPRFSWAQGAPAPVAGGVLTAHLSSEQRILNPALRASTGVYVITSKIIESLVDLGPDGAP
TPVLATRWEAAADGKSVTFTLREGVKWHDGKPFTSADVQYSAMELWKKHLNYGTQLQRYLEAVDTPDATTAIFRYSRTMP
LPLLLRALADLGYVVPRHLFEGTNVLENPANTAPIGTGPFKFVEYQRGQYIVAERNPEYWRKGEPYLDRVVWRFITDKSA
ASAALETGQVQISAYTQLALSDIERLAKDSRFEVSSRGNEANSFNNTVEFNHRRKELADVRVRRAIAHAVDVDFFVENFL
YGRGKRATGFIPSISQAFYPGGAFPYPFDTKKAEALLDEAGYPRQKGGERFSLRLLPILNGEDVPQFATFLQQSLAEVGI
KVEIVQLDVAGALSAIYKDWNFDLATGWHQYRGDPAVSTTVWFRSGSPKGAPWTNQFGWESAEVDTLIDDAAAEIDPVKR
KALYAQLVDVINEELPVWFATERQFVSVTNKVVQNHHNIPRWPSSDWHDTWIAK

Sequences:

>Translated_534_residues
MSLSRRSFLASTALLAGAAALPRFSWAQGAPAPVAGGVLTAHLSSEQRILNPALRASTGVYVITSKIIESLVDLGPDGAP
TPVLATRWEAAADGKSVTFTLREGVKWHDGKPFTSADVQYSAMELWKKHLNYGTQLQRYLEAVDTPDATTAIFRYSRTMP
LPLLLRALADLGYVVPRHLFEGTNVLENPANTAPIGTGPFKFVEYQRGQYIVAERNPEYWRKGEPYLDRVVWRFITDKSA
ASAALETGQVQISAYTQLALSDIERLAKDSRFEVSSRGNEANSFNNTVEFNHRRKELADVRVRRAIAHAVDVDFFVENFL
YGRGKRATGFIPSISQAFYPGGAFPYPFDTKKAEALLDEAGYPRQKGGERFSLRLLPILNGEDVPQFATFLQQSLAEVGI
KVEIVQLDVAGALSAIYKDWNFDLATGWHQYRGDPAVSTTVWFRSGSPKGAPWTNQFGWESAEVDTLIDDAAAEIDPVKR
KALYAQLVDVINEELPVWFATERQFVSVTNKVVQNHHNIPRWPSSDWHDTWIAK
>Mature_533_residues
SLSRRSFLASTALLAGAAALPRFSWAQGAPAPVAGGVLTAHLSSEQRILNPALRASTGVYVITSKIIESLVDLGPDGAPT
PVLATRWEAAADGKSVTFTLREGVKWHDGKPFTSADVQYSAMELWKKHLNYGTQLQRYLEAVDTPDATTAIFRYSRTMPL
PLLLRALADLGYVVPRHLFEGTNVLENPANTAPIGTGPFKFVEYQRGQYIVAERNPEYWRKGEPYLDRVVWRFITDKSAA
SAALETGQVQISAYTQLALSDIERLAKDSRFEVSSRGNEANSFNNTVEFNHRRKELADVRVRRAIAHAVDVDFFVENFLY
GRGKRATGFIPSISQAFYPGGAFPYPFDTKKAEALLDEAGYPRQKGGERFSLRLLPILNGEDVPQFATFLQQSLAEVGIK
VEIVQLDVAGALSAIYKDWNFDLATGWHQYRGDPAVSTTVWFRSGSPKGAPWTNQFGWESAEVDTLIDDAAAEIDPVKRK
ALYAQLVDVINEELPVWFATERQFVSVTNKVVQNHHNIPRWPSSDWHDTWIAK

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=441, Percent_Identity=28.7981859410431, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1787762, Length=496, Percent_Identity=26.8145161290323, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1787052, Length=426, Percent_Identity=25.5868544600939, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1789887, Length=474, Percent_Identity=25.7383966244726, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87081878, Length=390, Percent_Identity=25.8974358974359, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789397, Length=510, Percent_Identity=23.3333333333333, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787551, Length=526, Percent_Identity=24.1444866920152, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87082063, Length=525, Percent_Identity=23.047619047619, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59456; Mature: 59324

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRRSFLASTALLAGAAALPRFSWAQGAPAPVAGGVLTAHLSSEQRILNPALRASTGV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCE
YVITSKIIESLVDLGPDGAPTPVLATRWEAAADGKSVTFTLREGVKWHDGKPFTSADVQY
EEHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCEECCCCCCCCCCCHH
SAMELWKKHLNYGTQLQRYLEAVDTPDATTAIFRYSRTMPLPLLLRALADLGYVVPRHLF
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EGTNVLENPANTAPIGTGPFKFVEYQRGQYIVAERNPEYWRKGEPYLDRVVWRFITDKSA
CCCCHHCCCCCCCCCCCCCHHHEEECCCCEEEECCCCHHHHCCCHHHHHHHHHHHHCCHH
ASAALETGQVQISAYTQLALSDIERLAKDSRFEVSSRGNEANSFNNTVEFNHRRKELADV
HHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEECCHHHHHHHHH
RVRRAIAHAVDVDFFVENFLYGRGKRATGFIPSISQAFYPGGAFPYPFDTKKAEALLDEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHC
GYPRQKGGERFSLRLLPILNGEDVPQFATFLQQSLAEVGIKVEIVQLDVAGALSAIYKDW
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHCC
NFDLATGWHQYRGDPAVSTTVWFRSGSPKGAPWTNQFGWESAEVDTLIDDAAAEIDPVKR
CCCHHCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
KALYAQLVDVINEELPVWFATERQFVSVTNKVVQNHHNIPRWPSSDWHDTWIAK
HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLSRRSFLASTALLAGAAALPRFSWAQGAPAPVAGGVLTAHLSSEQRILNPALRASTGV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCE
YVITSKIIESLVDLGPDGAPTPVLATRWEAAADGKSVTFTLREGVKWHDGKPFTSADVQY
EEHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCEECCCCCCCCCCCHH
SAMELWKKHLNYGTQLQRYLEAVDTPDATTAIFRYSRTMPLPLLLRALADLGYVVPRHLF
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EGTNVLENPANTAPIGTGPFKFVEYQRGQYIVAERNPEYWRKGEPYLDRVVWRFITDKSA
CCCCHHCCCCCCCCCCCCCHHHEEECCCCEEEECCCCHHHHCCCHHHHHHHHHHHHCCHH
ASAALETGQVQISAYTQLALSDIERLAKDSRFEVSSRGNEANSFNNTVEFNHRRKELADV
HHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEECCHHHHHHHHH
RVRRAIAHAVDVDFFVENFLYGRGKRATGFIPSISQAFYPGGAFPYPFDTKKAEALLDEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHC
GYPRQKGGERFSLRLLPILNGEDVPQFATFLQQSLAEVGIKVEIVQLDVAGALSAIYKDW
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHCC
NFDLATGWHQYRGDPAVSTTVWFRSGSPKGAPWTNQFGWESAEVDTLIDDAAAEIDPVKR
CCCHHCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
KALYAQLVDVINEELPVWFATERQFVSVTNKVVQNHHNIPRWPSSDWHDTWIAK
HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA