Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is sam [H]

Identifier: 83593342

GI number: 83593342

Start: 2318681

End: 2319718

Strand: Reverse

Name: sam [H]

Synonym: Rru_A2007

Alternate gene names: 83593342

Gene position: 2319718-2318681 (Counterclockwise)

Preceding gene: 83593345

Following gene: 83593339

Centisome position: 53.29

GC content: 69.36

Gene sequence:

>1038_bases
ATGGCCGTTTCTTCCGCTGCTCCGCGTCCGGGCGATCGTGCCGCCGGCGCTCCCGACGGCGCCCCTGACAGTGCCCCCGA
TGGCGCCCCCGATGGCGTCCATGATACGGCGCGCGGCGTCGCCTGGGTTCTGGTCGCCTGCGTCATCTTCACCCTGGTTT
ATGCTTCGGGCCGTCTGGCCGGCGGCGGTGTCGGCGGCCTGCAGATCATGGCCATCCGCTATGCCTCGGCCCTGGTTTGC
ATCGTCGGCTTCGCCTTGGCCCGGCGCGGCGGGGTGAGCGCCTGCCGCAGCCCGCGCCCCTTTCGCCATTTCAGCCGGGC
GATGATGGGCGGCCTGGGCGGCGCCTGCCTGATCCAGGGGGTGACCTTGCTGCCGATGGCCGAGGCCTCGGCCATCGGTC
TGCTGGACGGCGTCTTCTCGGTGATCCTGGGCATCGTGCTGCTGGGCGAGCGGGTGAGGCCCCTGCGCTGGCTTGGCGTG
GCGCTGTCGCTGGTGGGGGGCGTGCTGGTGATCGCCGGACGGGCCGACCTCAGCGGCTTGCTTGATCACCTGCTGGCCGG
CGGGGCGGTGTTCTATCCCCTGGCTGGCGCCGCCTTCGTCGCCATGGAACGCGTTCTCATGCGTCAATTGGCGCTGCGCG
AGGGCAAGATGGCGATCTTGTTCCACGTCAATTTGTTTGGCACGCTGATCTTGATGCCGGTCGCCTTGATGACCTGGGTG
CCCCTTGAGGGGCCGACGCTGGCCTTGCTGATCGCCTTCGGGCCGCTGGCCCTGCTGGGCCAGTTCTGCAATATCCGGGG
GTTCGCCCTGGCCGAGGTCTCGATCACCGGACCGGTGTGGTATTCCTGGCTGATCTTCGCCGCCGCCCTCGGCTGGGTGA
TGTTTGACGAGGTTCCCGGGCCGGGCGTCATCCTGGGTGGCGCCGTTATCGCCCTCGGCGGAGTTTTCCTCTGCGCTTCG
GGGCGCAAGCGGACCCCGGCCCTACCGGCCGATACCCTGGGCCCTTCGGAAACCCCCGGCAAGGCAGGGCGCGAATGA

Upstream 100 bases:

>100_bases
TTTTCTTAACTGCGGTCCGGCCGATCAGGGCTTGCGGATCGGCCGGCGATGGCGAAGATGGGGGCGGCCTCCCCCGCCAT
TCCCCTTCAGGACCCCCCTT

Downstream 100 bases:

>100_bases
CCCAAAAAAGCCCCCCTATCCGTCTTGAACAGGGGGGGCGCCGATGGTGACATTGCGCGATATGCGGCGCGTTCTGGGCG
TGGCGATGTGGGGCGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MAVSSAAPRPGDRAAGAPDGAPDSAPDGAPDGVHDTARGVAWVLVACVIFTLVYASGRLAGGGVGGLQIMAIRYASALVC
IVGFALARRGGVSACRSPRPFRHFSRAMMGGLGGACLIQGVTLLPMAEASAIGLLDGVFSVILGIVLLGERVRPLRWLGV
ALSLVGGVLVIAGRADLSGLLDHLLAGGAVFYPLAGAAFVAMERVLMRQLALREGKMAILFHVNLFGTLILMPVALMTWV
PLEGPTLALLIAFGPLALLGQFCNIRGFALAEVSITGPVWYSWLIFAAALGWVMFDEVPGPGVILGGAVIALGGVFLCAS
GRKRTPALPADTLGPSETPGKAGRE

Sequences:

>Translated_345_residues
MAVSSAAPRPGDRAAGAPDGAPDSAPDGAPDGVHDTARGVAWVLVACVIFTLVYASGRLAGGGVGGLQIMAIRYASALVC
IVGFALARRGGVSACRSPRPFRHFSRAMMGGLGGACLIQGVTLLPMAEASAIGLLDGVFSVILGIVLLGERVRPLRWLGV
ALSLVGGVLVIAGRADLSGLLDHLLAGGAVFYPLAGAAFVAMERVLMRQLALREGKMAILFHVNLFGTLILMPVALMTWV
PLEGPTLALLIAFGPLALLGQFCNIRGFALAEVSITGPVWYSWLIFAAALGWVMFDEVPGPGVILGGAVIALGGVFLCAS
GRKRTPALPADTLGPSETPGKAGRE
>Mature_344_residues
AVSSAAPRPGDRAAGAPDGAPDSAPDGAPDGVHDTARGVAWVLVACVIFTLVYASGRLAGGGVGGLQIMAIRYASALVCI
VGFALARRGGVSACRSPRPFRHFSRAMMGGLGGACLIQGVTLLPMAEASAIGLLDGVFSVILGIVLLGERVRPLRWLGVA
LSLVGGVLVIAGRADLSGLLDHLLAGGAVFYPLAGAAFVAMERVLMRQLALREGKMAILFHVNLFGTLILMPVALMTWVP
LEGPTLALLIAFGPLALLGQFCNIRGFALAEVSITGPVWYSWLIFAAALGWVMFDEVPGPGVILGGAVIALGGVFLCASG
RKRTPALPADTLGPSETPGKAGRE

Specific function: Transports S-adenosylmethionine [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35354; Mature: 35223

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSSAAPRPGDRAAGAPDGAPDSAPDGAPDGVHDTARGVAWVLVACVIFTLVYASGRLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGGVGGLQIMAIRYASALVCIVGFALARRGGVSACRSPRPFRHFSRAMMGGLGGACLIQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHCC
VTLLPMAEASAIGLLDGVFSVILGIVLLGERVRPLRWLGVALSLVGGVLVIAGRADLSGL
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHH
LDHLLAGGAVFYPLAGAAFVAMERVLMRQLALREGKMAILFHVNLFGTLILMPVALMTWV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHC
PLEGPTLALLIAFGPLALLGQFCNIRGFALAEVSITGPVWYSWLIFAAALGWVMFDEVPG
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
PGVILGGAVIALGGVFLCASGRKRTPALPADTLGPSETPGKAGRE
CCEEHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVSSAAPRPGDRAAGAPDGAPDSAPDGAPDGVHDTARGVAWVLVACVIFTLVYASGRLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGGVGGLQIMAIRYASALVCIVGFALARRGGVSACRSPRPFRHFSRAMMGGLGGACLIQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHCC
VTLLPMAEASAIGLLDGVFSVILGIVLLGERVRPLRWLGVALSLVGGVLVIAGRADLSGL
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHH
LDHLLAGGAVFYPLAGAAFVAMERVLMRQLALREGKMAILFHVNLFGTLILMPVALMTWV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHC
PLEGPTLALLIAFGPLALLGQFCNIRGFALAEVSITGPVWYSWLIFAAALGWVMFDEVPG
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
PGVILGGAVIALGGVFLCASGRKRTPALPADTLGPSETPGKAGRE
CCEEHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]