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The map label for this gene is ybbI [C]

Identifier: 83593329

GI number: 83593329

Start: 2303912

End: 2304319

Strand: Reverse

Name: ybbI [C]

Synonym: Rru_A1994

Alternate gene names: 83593329

Gene position: 2304319-2303912 (Counterclockwise)

Preceding gene: 83593330

Following gene: 83593328

Centisome position: 52.94

GC content: 64.95

Gene sequence:

>408_bases
ATGACCAAGAGCCGTGACAGTTTCTCCATCGCCGATCTCGCCGCCGAGTTCTCCGTAACCCCGCGGGCGATCCGTTTCTA
TGAGGACAAGGGGCTGATCACCCCGGCCCGCGACGGGATGCGCCGCATCTATTCGCCGCGCGACCGGGTGCGGCTGATGC
TGATCCTGCGCGGCAAGCGCCTGGGGTTTTCGCTGAAGGAAATCCAGGAGATCATCGATCTGTATGATGCGGAGCCGACG
GGCGAGGCTCAGTTGCGCCGCCTGATCACCACCTGCCAGACCTCGCGCGCCGCCTTGCGCCAGCAGATGGAGGATATCCG
CATCACCATCGACGAGATCGAGGCCGTGGAAGCCCAATGCCGGCAGGCTCTGCTGGAAGGCCCGCGTTCGCGCAAGGCCG
TGGGCTAG

Upstream 100 bases:

>100_bases
GTTCCTGATGCCCTGAGAGGGACGGGTCCGCCGCCGGGGTGTGTTTTGGAAGCGATCAAAGTTCTCGACGCTGACTTGCC
CTTTACGTAAAGTATGGTCC

Downstream 100 bases:

>100_bases
GGAGACGAAGCGCCATGCCTGAAGGATCCTTGCCCGGCCTCGAGGTTGACACCTGTTTCCTGCGCCGCCTGACGACTCTG
GCCCGGGGACGCGGCCTGTC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Regulatory Protein; MerR Family Regulatory Family; Transcription Regulator Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTKSRDSFSIADLAAEFSVTPRAIRFYEDKGLITPARDGMRRIYSPRDRVRLMLILRGKRLGFSLKEIQEIIDLYDAEPT
GEAQLRRLITTCQTSRAALRQQMEDIRITIDEIEAVEAQCRQALLEGPRSRKAVG

Sequences:

>Translated_135_residues
MTKSRDSFSIADLAAEFSVTPRAIRFYEDKGLITPARDGMRRIYSPRDRVRLMLILRGKRLGFSLKEIQEIIDLYDAEPT
GEAQLRRLITTCQTSRAALRQQMEDIRITIDEIEAVEAQCRQALLEGPRSRKAVG
>Mature_134_residues
TKSRDSFSIADLAAEFSVTPRAIRFYEDKGLITPARDGMRRIYSPRDRVRLMLILRGKRLGFSLKEIQEIIDLYDAEPTG
EAQLRRLITTCQTSRAALRQQMEDIRITIDEIEAVEAQCRQALLEGPRSRKAVG

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15442; Mature: 15311

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSRDSFSIADLAAEFSVTPRAIRFYEDKGLITPARDGMRRIYSPRDRVRLMLILRGKR
CCCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCHHHHHHHHCCHHHHEEHHHCCCCC
LGFSLKEIQEIIDLYDAEPTGEAQLRRLITTCQTSRAALRQQMEDIRITIDEIEAVEAQC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQALLEGPRSRKAVG
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
TKSRDSFSIADLAAEFSVTPRAIRFYEDKGLITPARDGMRRIYSPRDRVRLMLILRGKR
CCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCHHHHHHHHCCHHHHEEHHHCCCCC
LGFSLKEIQEIIDLYDAEPTGEAQLRRLITTCQTSRAALRQQMEDIRITIDEIEAVEAQC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQALLEGPRSRKAVG
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA