| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is iorA [H]
Identifier: 83593313
GI number: 83593313
Start: 2288020
End: 2289882
Strand: Reverse
Name: iorA [H]
Synonym: Rru_A1978
Alternate gene names: 83593313
Gene position: 2289882-2288020 (Counterclockwise)
Preceding gene: 83593314
Following gene: 83593312
Centisome position: 52.61
GC content: 68.17
Gene sequence:
>1863_bases ATGCCCGTGACCGTTCTCAACCGGGTTCTTGCCGGAACCCGCCCGCTGATGTCGGGCAATGAGGCCGTTGCCCGCGCCGT CTGGGAATCCGGCGCCGCGCTCGCTTCGGCCTATCCCGGCACGCCATCGACCGAGATTCTCGAATCCCTGGCCCTGTACC CCGATATCGTCGCCCAATGGGGCGTCAACGAGAAGGTGGCGCTAGAAACCGCCATCGGCGCCTCGCTGACCGGGGCGCGG GCCTTCTGCGCCATGAAGCACGTCGGCCTCAACGTCGCCGCCGACGCCTTGATGAGTCAGGCCCTGGCCGGGATCCATGG CGGGCTGGTGATCGCCGTCGCCGATGATGTCGGGCTGTCGTCAAGCCAGAACGAGCAAGACAGCCGCTATTGGGGGCGCT TCGCCCATCTGCCGGTGCTCGAACCCGCCGACGCCCAGGAGGCCTATGCCTTCACCCTGGCGGCCTTCGCCCTATCGGAG CGCTTCCACACCCTGGTCATCCTGCGCCTGACCACCCGGGTCTGCCACGTCAAGGCCCTGGTCGCCACCGGCGAGCGCCA ACCCCACGCCAGCTTAGGCTTCGCCCGCGATCCCAAGCGCTGGGTGATGCTGCCCGCCCATGTGCGGGGGATGATCCCGG TGCAGATCGCCCGCGACGCCGCCCTGGCCGCGCATGCCGAGGAAAGCCCGCTGCTCTGCGAGCTCGAAGGCGATGATCCC AGCATCGGCATCATCGCCAGCGGTCCGGCGGCGCTGTCGGCGCGCGAGGCCTTTCCCGAGGCGCCGCTGCTCAAGCTTGG CCTTGGCTATCCTTTGCCCATCGAGCGCATCCGCGCCTTCGCCGCTGGCGTTGGCAGGCTTCTGGTGGTTGAAGAGACCG AGCCGCTGGTGGAAACCGAACTGCGCGCCCAGGGCATCGCCGTCACCGGCAAGGATCTGCTGCCGCGCTATGGCGAGCTG TCGGTGGCCGTGCTGCGCGGCGCCCGGGCCCGCTTGCGCGGCGAGGCGGCGCCGGCGGTGGCGGCGCCCATTGATGTGTT TCCCCGGCCGCCGACCATGTGTCCGGGCTGTCCCCATCTGGCGCCGTTCTATTGCCTGTCGCGCTTACGCGGGTCGCTGC TGATCAGCGGCGATATCGGCTGCTACACCCTGGGCGCCGGCCAGCCCTGGCAGGCGATGGACGCCTGCACCTGCATGGGC GCCTCGCTGACCCTGGCCAATGGCATGGCGGTGGCCAAAACCGGTGACGACGCCGAGAAGGCGGTGGTCGCGGTGATCGG CGATTCCACCTTCTTGCACATGGGCATGCAGGGCCTGCTCAATCTTGTCTACAACCGGGCCAATGTCACCGTTCTGCTGC TCGATAACCGCACGGTGGGGATGACCGGCGGCCAGGAGCATCCGGGCACCGGCTTTGATATCCACGGCGATCCGGCGCCC CGCGTCGATTTCGTCGCCCTGGTCCAGGCGCTGGGGGTCAAGGCCGAGCGGGTTCACAGCGTCGATCCCTATGACCTGCC CGGTTTGTTCAAGCTGATCCGCAGCGAGACGGCGGTCAATGATGTCTCGGTGATCCTGACCAACCGTCCCTGCGTGTTGA CCGATCGCCACCATTCGCGCCCGGCCCTGGGCGTGGTCGAAGCCGAGTGTACCGGCTGCGGCGGATGCCTGCAGGTCGGC TGTCCGGCGATCCAGGTGGTGCGCCGCGATCGCGTGATGACGCCAAGCGGTCGGGAAAAGGAGCGGGCTTTCGTCACCAT CGACAGCGCCTTTTGCACCGGCTGCAACGCCTGCGTCGGGCTGTGCGCGCCCAAATGCATCCAGCCGCTGGCGGCGATGT CTGAACGCTGCGAAGGGGTCTGA
Upstream 100 bases:
>100_bases TTTTCAATCACAGAGGCCCTACTTGGCGCAAGGTTAAGGTTGTTGGCTGGGGGGAAACTGTTTAGTCATAGGCGATGAAG CTCCAAGGCATAGGGGGAGT
Downstream 100 bases:
>100_bases GCGATGAGCGTGACGAATATTCTGCTCTGCGGCATCGGCGGCCAGGGCGTGCTGACCGCCGCCGAACTGTTGGCCCAGGC GGCGGTGGCCGAGGGGCATG
Product: indolepyruvate ferredoxin oxidoreductase
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MPVTVLNRVLAGTRPLMSGNEAVARAVWESGAALASAYPGTPSTEILESLALYPDIVAQWGVNEKVALETAIGASLTGAR AFCAMKHVGLNVAADALMSQALAGIHGGLVIAVADDVGLSSSQNEQDSRYWGRFAHLPVLEPADAQEAYAFTLAAFALSE RFHTLVILRLTTRVCHVKALVATGERQPHASLGFARDPKRWVMLPAHVRGMIPVQIARDAALAAHAEESPLLCELEGDDP SIGIIASGPAALSAREAFPEAPLLKLGLGYPLPIERIRAFAAGVGRLLVVEETEPLVETELRAQGIAVTGKDLLPRYGEL SVAVLRGARARLRGEAAPAVAAPIDVFPRPPTMCPGCPHLAPFYCLSRLRGSLLISGDIGCYTLGAGQPWQAMDACTCMG ASLTLANGMAVAKTGDDAEKAVVAVIGDSTFLHMGMQGLLNLVYNRANVTVLLLDNRTVGMTGGQEHPGTGFDIHGDPAP RVDFVALVQALGVKAERVHSVDPYDLPGLFKLIRSETAVNDVSVILTNRPCVLTDRHHSRPALGVVEAECTGCGGCLQVG CPAIQVVRRDRVMTPSGREKERAFVTIDSAFCTGCNACVGLCAPKCIQPLAAMSERCEGV
Sequences:
>Translated_620_residues MPVTVLNRVLAGTRPLMSGNEAVARAVWESGAALASAYPGTPSTEILESLALYPDIVAQWGVNEKVALETAIGASLTGAR AFCAMKHVGLNVAADALMSQALAGIHGGLVIAVADDVGLSSSQNEQDSRYWGRFAHLPVLEPADAQEAYAFTLAAFALSE RFHTLVILRLTTRVCHVKALVATGERQPHASLGFARDPKRWVMLPAHVRGMIPVQIARDAALAAHAEESPLLCELEGDDP SIGIIASGPAALSAREAFPEAPLLKLGLGYPLPIERIRAFAAGVGRLLVVEETEPLVETELRAQGIAVTGKDLLPRYGEL SVAVLRGARARLRGEAAPAVAAPIDVFPRPPTMCPGCPHLAPFYCLSRLRGSLLISGDIGCYTLGAGQPWQAMDACTCMG ASLTLANGMAVAKTGDDAEKAVVAVIGDSTFLHMGMQGLLNLVYNRANVTVLLLDNRTVGMTGGQEHPGTGFDIHGDPAP RVDFVALVQALGVKAERVHSVDPYDLPGLFKLIRSETAVNDVSVILTNRPCVLTDRHHSRPALGVVEAECTGCGGCLQVG CPAIQVVRRDRVMTPSGREKERAFVTIDSAFCTGCNACVGLCAPKCIQPLAAMSERCEGV >Mature_619_residues PVTVLNRVLAGTRPLMSGNEAVARAVWESGAALASAYPGTPSTEILESLALYPDIVAQWGVNEKVALETAIGASLTGARA FCAMKHVGLNVAADALMSQALAGIHGGLVIAVADDVGLSSSQNEQDSRYWGRFAHLPVLEPADAQEAYAFTLAAFALSER FHTLVILRLTTRVCHVKALVATGERQPHASLGFARDPKRWVMLPAHVRGMIPVQIARDAALAAHAEESPLLCELEGDDPS IGIIASGPAALSAREAFPEAPLLKLGLGYPLPIERIRAFAAGVGRLLVVEETEPLVETELRAQGIAVTGKDLLPRYGELS VAVLRGARARLRGEAAPAVAAPIDVFPRPPTMCPGCPHLAPFYCLSRLRGSLLISGDIGCYTLGAGQPWQAMDACTCMGA SLTLANGMAVAKTGDDAEKAVVAVIGDSTFLHMGMQGLLNLVYNRANVTVLLLDNRTVGMTGGQEHPGTGFDIHGDPAPR VDFVALVQALGVKAERVHSVDPYDLPGLFKLIRSETAVNDVSVILTNRPCVLTDRHHSRPALGVVEAECTGCGGCLQVGC PAIQVVRRDRVMTPSGREKERAFVTIDSAFCTGCNACVGLCAPKCIQPLAAMSERCEGV
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 65367; Mature: 65236
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTVLNRVLAGTRPLMSGNEAVARAVWESGAALASAYPGTPSTEILESLALYPDIVAQW CCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHECCCCCCCHHHHHHHHHHHHHHHHHC GVNEKVALETAIGASLTGARAFCAMKHVGLNVAADALMSQALAGIHGGLVIAVADDVGLS CCCCCEEEEHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SSQNEQDSRYWGRFAHLPVLEPADAQEAYAFTLAAFALSERFHTLVILRLTTRVCHVKAL CCCCCCHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH VATGERQPHASLGFARDPKRWVMLPAHVRGMIPVQIARDAALAAHAEESPLLCELEGDDP HHCCCCCCCCCCCCCCCCCCEEEECHHHCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCC SIGIIASGPAALSAREAFPEAPLLKLGLGYPLPIERIRAFAAGVGRLLVVEETEPLVETE CEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHH LRAQGIAVTGKDLLPRYGELSVAVLRGARARLRGEAAPAVAAPIDVFPRPPTMCPGCPHL HHHCCEEEECHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCH APFYCLSRLRGSLLISGDIGCYTLGAGQPWQAMDACTCMGASLTLANGMAVAKTGDDAEK HHHHHHHHCCCCEEEECCCCEEECCCCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCCC AVVAVIGDSTFLHMGMQGLLNLVYNRANVTVLLLDNRTVGMTGGQEHPGTGFDIHGDPAP EEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCC RVDFVALVQALGVKAERVHSVDPYDLPGLFKLIRSETAVNDVSVILTNRPCVLTDRHHSR CHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCC PALGVVEAECTGCGGCLQVGCPAIQVVRRDRVMTPSGREKERAFVTIDSAFCTGCNACVG CCCEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHCCHHHHHH LCAPKCIQPLAAMSERCEGV HCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PVTVLNRVLAGTRPLMSGNEAVARAVWESGAALASAYPGTPSTEILESLALYPDIVAQW CHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHECCCCCCCHHHHHHHHHHHHHHHHHC GVNEKVALETAIGASLTGARAFCAMKHVGLNVAADALMSQALAGIHGGLVIAVADDVGLS CCCCCEEEEHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SSQNEQDSRYWGRFAHLPVLEPADAQEAYAFTLAAFALSERFHTLVILRLTTRVCHVKAL CCCCCCHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH VATGERQPHASLGFARDPKRWVMLPAHVRGMIPVQIARDAALAAHAEESPLLCELEGDDP HHCCCCCCCCCCCCCCCCCCEEEECHHHCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCC SIGIIASGPAALSAREAFPEAPLLKLGLGYPLPIERIRAFAAGVGRLLVVEETEPLVETE CEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHH LRAQGIAVTGKDLLPRYGELSVAVLRGARARLRGEAAPAVAAPIDVFPRPPTMCPGCPHL HHHCCEEEECHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCH APFYCLSRLRGSLLISGDIGCYTLGAGQPWQAMDACTCMGASLTLANGMAVAKTGDDAEK HHHHHHHHCCCCEEEECCCCEEECCCCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCCC AVVAVIGDSTFLHMGMQGLLNLVYNRANVTVLLLDNRTVGMTGGQEHPGTGFDIHGDPAP EEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCC RVDFVALVQALGVKAERVHSVDPYDLPGLFKLIRSETAVNDVSVILTNRPCVLTDRHHSR CHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCC PALGVVEAECTGCGGCLQVGCPAIQVVRRDRVMTPSGREKERAFVTIDSAFCTGCNACVG CCCEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHCCHHHHHH LCAPKCIQPLAAMSERCEGV HCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]