| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593302
Identifier: 83593302
GI number: 83593302
Start: 2274402
End: 2275793
Strand: Direct
Name: 83593302
Synonym: Rru_A1967
Alternate gene names: NA
Gene position: 2274402-2275793 (Clockwise)
Preceding gene: 83593301
Following gene: 83593303
Centisome position: 52.25
GC content: 70.04
Gene sequence:
>1392_bases ATGGCCCCATCCCTGCTTTTTGAAGCCGTTCTCGCCCAGCCCGGACAGGGTGTCGGCCGCGCCTGCGCCCTGCTCTGCGC CCTTGGCGCCGAAGTCTTGTTGCCCGGGGCGGTCTCGATCAGCCTGCGCTGCTCCAAAGCCTTGGCCGATCGCCTGGGGC CCGACCGCCTGATCCAGGCCGATGCCGTGGTGCGCAAGCGCTATGACCTTGCCCAGGATCAACCCTGGCTGTGCTCGGAT GGCCCTGATCCGACGCTAATGCGCGTGGCCTTGCCCGCGCTTGCCGAGGGGGTCAGCGGCTTTGTGCGCATTCCGCCCTG CGCCGCCCAGCCGCCGCTGCCCGGCCGGCCGATCCACGCGCCGCGCCCGCCGCTGTCGCCGCTGCCCCCGGACGTACCCT ATTTCCATTTACAGGCACCCGAGGATCTGAGCGCCCTGCTCGGCGCCCGAGACCTTCACCAGCGCGGGGAGACCGGCCGG GGGGTGCGGGTGGCGGTGGTCGATAGCGGCTTTTACGCCCATCCCTGGTTCGGCAGTCGCGATCTTGGCGTTCGCGTGTT GCTCGCCCCCGGGGCCCGGGCGCCGGCTTGCGACGAAATCGGCCATGGCACCATGGTCTGCGCCGCCTTGTTGTCGCTGG CCCCGGGCGCCCAGGTCACCCTGGTCAAACAGAACGGCGACGACGAGGTTTTCGTCGCCTTCAAACTGGCGCTGAGCCTA TCGCCCGACATCGTCCAGAATACCTGGGGCTACAGCTTGGCCGAGGGACGGCTGGGAGCGGCCGAAGACCTGATCGCCGC CACCTTGGAAGACGCCATCGCCCGGGGGATCCTGGTGGTTTTCGCCGGTGGCAACGGCGGTCTGCTGTATCCGTCGCAGC GGCCCGAGGTTCTGGCCATCGGCGGCGTCTTCCAGGGGGAAGACGGCGCGCGACAGGCGGCGAGCTACGCCAGCGGCTAT CTCAGCAAACTGTTCCCCGGCCGTCGGCTGCCCGATTTCTGCGCCCTGGTCGGCATGGCGCCGATGGGGGTCTATCTGGC GATGCCGACCCAACCGGGCGGACAGATCGACCGCGCCTTCGCCCAACAGCCCTATCCCGAGGGCGACGATACGCCGCCGA CCGACGGTTGGGTGGTGATCAGCGGCACCTCGGCGGCTTCGGCCCAGGTCTCGGGCCTCCTCGCCCTGCTGCGCGCCCGC GCTCCCGGCTTGTCCCAGGAACGGGCGCGGGCGCTTCTGGCCAAAACGGCGCGCGCCGTTCACCACGGCGCCTCGGCCCA GGGCAACCCCGCCGGACCGGGCCAACCCAATGTGGCGACCGGCTATGGTCTGGTCGACGCCCAGGCCGCCTTTGAGGCGC TTCCCTCGGTCATCGATACGATCCCCCCTTGA
Upstream 100 bases:
>100_bases TGCGCATCGATTACAAGGCGCCGGGCCAGCTTCGCTCGCCGATCGTCATCAAGATCTGACCGCCGGGCGGCCCGTCCGCC CGCCCTCGGGAGACGCTGCG
Downstream 100 bases:
>100_bases TCTCCAGGCGCCACCTCCTCATCTACCATCCAAATGGATGGTTCAAGGATGGTGGTGGGATGGAAAACAAAGTCGTATCG ATTCATGAGGCGCGGCCCAA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Peptidase S8 And S; Peptidase; Peptidase S8/S53 Subtilisin Kexin Sedolisin
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MAPSLLFEAVLAQPGQGVGRACALLCALGAEVLLPGAVSISLRCSKALADRLGPDRLIQADAVVRKRYDLAQDQPWLCSD GPDPTLMRVALPALAEGVSGFVRIPPCAAQPPLPGRPIHAPRPPLSPLPPDVPYFHLQAPEDLSALLGARDLHQRGETGR GVRVAVVDSGFYAHPWFGSRDLGVRVLLAPGARAPACDEIGHGTMVCAALLSLAPGAQVTLVKQNGDDEVFVAFKLALSL SPDIVQNTWGYSLAEGRLGAAEDLIAATLEDAIARGILVVFAGGNGGLLYPSQRPEVLAIGGVFQGEDGARQAASYASGY LSKLFPGRRLPDFCALVGMAPMGVYLAMPTQPGGQIDRAFAQQPYPEGDDTPPTDGWVVISGTSAASAQVSGLLALLRAR APGLSQERARALLAKTARAVHHGASAQGNPAGPGQPNVATGYGLVDAQAAFEALPSVIDTIPP
Sequences:
>Translated_463_residues MAPSLLFEAVLAQPGQGVGRACALLCALGAEVLLPGAVSISLRCSKALADRLGPDRLIQADAVVRKRYDLAQDQPWLCSD GPDPTLMRVALPALAEGVSGFVRIPPCAAQPPLPGRPIHAPRPPLSPLPPDVPYFHLQAPEDLSALLGARDLHQRGETGR GVRVAVVDSGFYAHPWFGSRDLGVRVLLAPGARAPACDEIGHGTMVCAALLSLAPGAQVTLVKQNGDDEVFVAFKLALSL SPDIVQNTWGYSLAEGRLGAAEDLIAATLEDAIARGILVVFAGGNGGLLYPSQRPEVLAIGGVFQGEDGARQAASYASGY LSKLFPGRRLPDFCALVGMAPMGVYLAMPTQPGGQIDRAFAQQPYPEGDDTPPTDGWVVISGTSAASAQVSGLLALLRAR APGLSQERARALLAKTARAVHHGASAQGNPAGPGQPNVATGYGLVDAQAAFEALPSVIDTIPP >Mature_462_residues APSLLFEAVLAQPGQGVGRACALLCALGAEVLLPGAVSISLRCSKALADRLGPDRLIQADAVVRKRYDLAQDQPWLCSDG PDPTLMRVALPALAEGVSGFVRIPPCAAQPPLPGRPIHAPRPPLSPLPPDVPYFHLQAPEDLSALLGARDLHQRGETGRG VRVAVVDSGFYAHPWFGSRDLGVRVLLAPGARAPACDEIGHGTMVCAALLSLAPGAQVTLVKQNGDDEVFVAFKLALSLS PDIVQNTWGYSLAEGRLGAAEDLIAATLEDAIARGILVVFAGGNGGLLYPSQRPEVLAIGGVFQGEDGARQAASYASGYL SKLFPGRRLPDFCALVGMAPMGVYLAMPTQPGGQIDRAFAQQPYPEGDDTPPTDGWVVISGTSAASAQVSGLLALLRARA PGLSQERARALLAKTARAVHHGASAQGNPAGPGQPNVATGYGLVDAQAAFEALPSVIDTIPP
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47947; Mature: 47816
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSLLFEAVLAQPGQGVGRACALLCALGAEVLLPGAVSISLRCSKALADRLGPDRLIQA CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHH DAVVRKRYDLAQDQPWLCSDGPDPTLMRVALPALAEGVSGFVRIPPCAAQPPLPGRPIHA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC PRPPLSPLPPDVPYFHLQAPEDLSALLGARDLHQRGETGRGVRVAVVDSGFYAHPWFGSR CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCCCCCC DLGVRVLLAPGARAPACDEIGHGTMVCAALLSLAPGAQVTLVKQNGDDEVFVAFKLALSL CCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEHHC SPDIVQNTWGYSLAEGRLGAAEDLIAATLEDAIARGILVVFAGGNGGLLYPSQRPEVLAI CHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCEEEE GGVFQGEDGARQAASYASGYLSKLFPGRRLPDFCALVGMAPMGVYLAMPTQPGGQIDRAF CCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHH AQQPYPEGDDTPPTDGWVVISGTSAASAQVSGLLALLRARAPGLSQERARALLAKTARAV HCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH HHGASAQGNPAGPGQPNVATGYGLVDAQAAFEALPSVIDTIPP HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure APSLLFEAVLAQPGQGVGRACALLCALGAEVLLPGAVSISLRCSKALADRLGPDRLIQA CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHH DAVVRKRYDLAQDQPWLCSDGPDPTLMRVALPALAEGVSGFVRIPPCAAQPPLPGRPIHA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC PRPPLSPLPPDVPYFHLQAPEDLSALLGARDLHQRGETGRGVRVAVVDSGFYAHPWFGSR CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCCCCCC DLGVRVLLAPGARAPACDEIGHGTMVCAALLSLAPGAQVTLVKQNGDDEVFVAFKLALSL CCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEHHC SPDIVQNTWGYSLAEGRLGAAEDLIAATLEDAIARGILVVFAGGNGGLLYPSQRPEVLAI CHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCEEEE GGVFQGEDGARQAASYASGYLSKLFPGRRLPDFCALVGMAPMGVYLAMPTQPGGQIDRAF CCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHH AQQPYPEGDDTPPTDGWVVISGTSAASAQVSGLLALLRARAPGLSQERARALLAKTARAV HCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH HHGASAQGNPAGPGQPNVATGYGLVDAQAAFEALPSVIDTIPP HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA