Click here to switch to the map view.

The map label for this gene is ydhK [H]

Identifier: 83593287

GI number: 83593287

Start: 2260962

End: 2263076

Strand: Direct

Name: ydhK [H]

Synonym: Rru_A1952

Alternate gene names: 83593287

Gene position: 2260962-2263076 (Clockwise)

Preceding gene: 83593285

Following gene: 83593288

Centisome position: 51.94

GC content: 65.82

Gene sequence:

>2115_bases
ATGAGCATCTCACCTCCTGCCAACAGATCCCCAGAGCGAACCGACACCGCCAGAGCCGGCGCGGTTTGGCATTTCTTACG
AGCCCCCGCCACCAAGGCGGACGCGGATGCGGCGCTCTTCTCGGTGAAGAGTTTCGCCGCGGCGATGCTGGCCTACTACA
TCGCGCTGCGTATCGGCCTTCCCAAGCCGTTCTGGGCCATCGTCACCGTCTATATCGTCTCGCAGACCTCGGCCGGCGCG
TCGCTCAGCCGCGGGGTCTATCGCTTGGCCGGGACGATTGCCGGTGCCGTGGCGACGGTGGCAATCGTTCCGAATGTCGT
GAACGATCCGATCGCCTGCAGCGCGGCTCTCGCCTGCTGGATCGGTCTTTGCCTGTTTTTCTCGCTGCTTGATCGCACGC
CAAGGGCCTATGCCTTCGTTCTTGCCGGTTACACGGCGAGCCTGATCGGGTTCCCCAGCGTTCTTGATCCAGGCGCGGTC
TTCGATACGGCCTCGGCGCGGGTCCAGGAGATCTCGATCGGCATTCTTTGCGCCGTTCTGGCGCATCGTTACGTCCTGCC
AAAGCCCATGACCGGCCAGTTCACCGGCAAGCTGTCGGCAACATTGCGCTACGCCCGGTGGCTGGCGGGGGACGCGCTGA
ACGGAACGCGCGGGGAAAACCGTCACGACCGCACCCAACTCGCGGTGGACCTGCTCGCGCTGCAGGGTCTTGCGACGCAT
CTGCCCTATGACGCGGCCACAGCGTCGCCGCGTCGCGAGAAGCGGCGCCTGATCCATGACCGGCTTGCCCGGCTCCTTCC
GCTCGCAACCGAGATCGAGGAGCGGATTCACTGTCTCGGCGCCGGGGGCTATCAGGCGCCCGAGGATCTGATCGACCTGC
TCGGCGCCGTCGGAACCTGGATCGCCTCTGTCGATCTGGGCGAACGGGAAGGCGGCGCGATCGCTCTGATCGCCCGCGCC
CGCTTGATCCAGAAACGCCTCGGCGCGGACGCCGCGATGCCTGGCGACAGGCTCGCCGCCAATCTCGCCGGTCATCTGGC
CGAGATGATCGGTCTGCTTCGGGACTGCGATCGGCTTGGGCAGACCATCGCGACCGCCGACCGCCCGCGCGAGAGGGCCT
CGCTCCACGGGCCCCGGCGGGCGAAGGGCTATGTCTATCATCGTGATCCCTGGATGGCCGGCCGGGCCGCCTTGGGCGCC
ATCGTTGGCATCCTGATCGGTTGCGCCTTCTGGATCTGGTCGGCCTGGCCGGAGGGCGGAACGGCCGTCTCGATTTTCGG
CGTATGCTGCACCCTGTTTGGCAATGTCGACGCGCCAGTCCCCAACGTCCTCAAGTATATGGTCGGCTTGATCTATGGGG
TGGCGATCAGCCTCGCCTACAACTTCGTCATCCTTCCCCAAGTCACGGACTTCGCCGTTCTTGTCGCGGTGCTCGCCCCG
GCGTTCCTGTTCGCGGGCTCTCTGCAAGCCCGTCCCCCAACGACCTTCCTGGCGCTTGGCATCACCCTCACCATTCCGAT
CCTCTCGGGCCTGGGCACCGCCTATGCCGGCGACTTCGCCGCCTCCCTCAACACCGTCATCGCCGTCTTTATGGCGATCG
GATTCGGCATGGTGAGCATGTCCCTGTTCCAGACCATACCAGTCGATGCGGCGATCACCCGGCTGCTTCACTTAAGTCGG
AGGGACGTCAGCCGACGGGCGCTCGGGGGGGCGCCCAACGAAGCGCACTGGACGAGCCTGATGATCGATCGGACGGCGCT
GCTCCTGCCCAGAGTGCGCGCCTCCCGGAACACCCATTGGGACCTCCTCGACGATACGCTGCGCCATCTGCGCCTCGGGC
ACGCCGTTGGTCAGCTGCGCAAGACGATCCCGCAGCTCAAGGGCGAAGTGGGCAACGAAGTGAACGACCTTCTTTGCGCG
ATCGCCGCAGGCTTCAGCGCCAAAGCCCCGAGGGGACCGGTCGATCCCCTCGAGTTTGATCGGCGCATCGACACGGTGAC
GACGAGGGTCGCGGGCAGCGCGATCAAGACCCGCTTGCGGGTGCTCGATCTGCTCCTCGACCTGCGATTCGCGCTCGGAT
CTAGCAACACGGCGGACGGGACTCCCACCCCATGA

Upstream 100 bases:

>100_bases
CGACGGCGGATCGTGAGAGGACCATGTTTGGCAGCTTTTAGATATTTTTTGACAGAATACCGAATTTATCTACTTTTGCA
AGACGGTGATAATAGCTCGC

Downstream 100 bases:

>100_bases
TCGTTGATCTCACTCTTGGCGGCGTCCTTGTTCCCGGGCTGCTGGGGCTCGCGCTCATCGCCCTCGTCGCCACCATCGCG
GTGATCCGCCTCCTCTCCGT

Product: fusaric acid resistance protein region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 704; Mature: 703

Protein sequence:

>704_residues
MSISPPANRSPERTDTARAGAVWHFLRAPATKADADAALFSVKSFAAAMLAYYIALRIGLPKPFWAIVTVYIVSQTSAGA
SLSRGVYRLAGTIAGAVATVAIVPNVVNDPIACSAALACWIGLCLFFSLLDRTPRAYAFVLAGYTASLIGFPSVLDPGAV
FDTASARVQEISIGILCAVLAHRYVLPKPMTGQFTGKLSATLRYARWLAGDALNGTRGENRHDRTQLAVDLLALQGLATH
LPYDAATASPRREKRRLIHDRLARLLPLATEIEERIHCLGAGGYQAPEDLIDLLGAVGTWIASVDLGEREGGAIALIARA
RLIQKRLGADAAMPGDRLAANLAGHLAEMIGLLRDCDRLGQTIATADRPRERASLHGPRRAKGYVYHRDPWMAGRAALGA
IVGILIGCAFWIWSAWPEGGTAVSIFGVCCTLFGNVDAPVPNVLKYMVGLIYGVAISLAYNFVILPQVTDFAVLVAVLAP
AFLFAGSLQARPPTTFLALGITLTIPILSGLGTAYAGDFAASLNTVIAVFMAIGFGMVSMSLFQTIPVDAAITRLLHLSR
RDVSRRALGGAPNEAHWTSLMIDRTALLLPRVRASRNTHWDLLDDTLRHLRLGHAVGQLRKTIPQLKGEVGNEVNDLLCA
IAAGFSAKAPRGPVDPLEFDRRIDTVTTRVAGSAIKTRLRVLDLLLDLRFALGSSNTADGTPTP

Sequences:

>Translated_704_residues
MSISPPANRSPERTDTARAGAVWHFLRAPATKADADAALFSVKSFAAAMLAYYIALRIGLPKPFWAIVTVYIVSQTSAGA
SLSRGVYRLAGTIAGAVATVAIVPNVVNDPIACSAALACWIGLCLFFSLLDRTPRAYAFVLAGYTASLIGFPSVLDPGAV
FDTASARVQEISIGILCAVLAHRYVLPKPMTGQFTGKLSATLRYARWLAGDALNGTRGENRHDRTQLAVDLLALQGLATH
LPYDAATASPRREKRRLIHDRLARLLPLATEIEERIHCLGAGGYQAPEDLIDLLGAVGTWIASVDLGEREGGAIALIARA
RLIQKRLGADAAMPGDRLAANLAGHLAEMIGLLRDCDRLGQTIATADRPRERASLHGPRRAKGYVYHRDPWMAGRAALGA
IVGILIGCAFWIWSAWPEGGTAVSIFGVCCTLFGNVDAPVPNVLKYMVGLIYGVAISLAYNFVILPQVTDFAVLVAVLAP
AFLFAGSLQARPPTTFLALGITLTIPILSGLGTAYAGDFAASLNTVIAVFMAIGFGMVSMSLFQTIPVDAAITRLLHLSR
RDVSRRALGGAPNEAHWTSLMIDRTALLLPRVRASRNTHWDLLDDTLRHLRLGHAVGQLRKTIPQLKGEVGNEVNDLLCA
IAAGFSAKAPRGPVDPLEFDRRIDTVTTRVAGSAIKTRLRVLDLLLDLRFALGSSNTADGTPTP
>Mature_703_residues
SISPPANRSPERTDTARAGAVWHFLRAPATKADADAALFSVKSFAAAMLAYYIALRIGLPKPFWAIVTVYIVSQTSAGAS
LSRGVYRLAGTIAGAVATVAIVPNVVNDPIACSAALACWIGLCLFFSLLDRTPRAYAFVLAGYTASLIGFPSVLDPGAVF
DTASARVQEISIGILCAVLAHRYVLPKPMTGQFTGKLSATLRYARWLAGDALNGTRGENRHDRTQLAVDLLALQGLATHL
PYDAATASPRREKRRLIHDRLARLLPLATEIEERIHCLGAGGYQAPEDLIDLLGAVGTWIASVDLGEREGGAIALIARAR
LIQKRLGADAAMPGDRLAANLAGHLAEMIGLLRDCDRLGQTIATADRPRERASLHGPRRAKGYVYHRDPWMAGRAALGAI
VGILIGCAFWIWSAWPEGGTAVSIFGVCCTLFGNVDAPVPNVLKYMVGLIYGVAISLAYNFVILPQVTDFAVLVAVLAPA
FLFAGSLQARPPTTFLALGITLTIPILSGLGTAYAGDFAASLNTVIAVFMAIGFGMVSMSLFQTIPVDAAITRLLHLSRR
DVSRRALGGAPNEAHWTSLMIDRTALLLPRVRASRNTHWDLLDDTLRHLRLGHAVGQLRKTIPQLKGEVGNEVNDLLCAI
AAGFSAKAPRGPVDPLEFDRRIDTVTTRVAGSAIKTRLRVLDLLLDLRFALGSSNTADGTPTP

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]

Homologues:

Organism=Escherichia coli, GI1787933, Length=157, Percent_Identity=31.2101910828025, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1789636, Length=229, Percent_Identity=29.2576419213974, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 75189; Mature: 75058

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISPPANRSPERTDTARAGAVWHFLRAPATKADADAALFSVKSFAAAMLAYYIALRIGL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PKPFWAIVTVYIVSQTSAGASLSRGVYRLAGTIAGAVATVAIVPNVVNDPIACSAALACW
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHH
IGLCLFFSLLDRTPRAYAFVLAGYTASLIGFPSVLDPGAVFDTASARVQEISIGILCAVL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AHRYVLPKPMTGQFTGKLSATLRYARWLAGDALNGTRGENRHDRTQLAVDLLALQGLATH
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LPYDAATASPRREKRRLIHDRLARLLPLATEIEERIHCLGAGGYQAPEDLIDLLGAVGTW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IASVDLGEREGGAIALIARARLIQKRLGADAAMPGDRLAANLAGHLAEMIGLLRDCDRLG
HHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QTIATADRPRERASLHGPRRAKGYVYHRDPWMAGRAALGAIVGILIGCAFWIWSAWPEGG
HHHHHCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAVSIFGVCCTLFGNVDAPVPNVLKYMVGLIYGVAISLAYNFVILPQVTDFAVLVAVLAP
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHH
AFLFAGSLQARPPTTFLALGITLTIPILSGLGTAYAGDFAASLNTVIAVFMAIGFGMVSM
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFQTIPVDAAITRLLHLSRRDVSRRALGGAPNEAHWTSLMIDRTALLLPRVRASRNTHW
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DLLDDTLRHLRLGHAVGQLRKTIPQLKGEVGNEVNDLLCAIAAGFSAKAPRGPVDPLEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RRIDTVTTRVAGSAIKTRLRVLDLLLDLRFALGSSNTADGTPTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SISPPANRSPERTDTARAGAVWHFLRAPATKADADAALFSVKSFAAAMLAYYIALRIGL
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PKPFWAIVTVYIVSQTSAGASLSRGVYRLAGTIAGAVATVAIVPNVVNDPIACSAALACW
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHH
IGLCLFFSLLDRTPRAYAFVLAGYTASLIGFPSVLDPGAVFDTASARVQEISIGILCAVL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AHRYVLPKPMTGQFTGKLSATLRYARWLAGDALNGTRGENRHDRTQLAVDLLALQGLATH
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LPYDAATASPRREKRRLIHDRLARLLPLATEIEERIHCLGAGGYQAPEDLIDLLGAVGTW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IASVDLGEREGGAIALIARARLIQKRLGADAAMPGDRLAANLAGHLAEMIGLLRDCDRLG
HHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QTIATADRPRERASLHGPRRAKGYVYHRDPWMAGRAALGAIVGILIGCAFWIWSAWPEGG
HHHHHCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAVSIFGVCCTLFGNVDAPVPNVLKYMVGLIYGVAISLAYNFVILPQVTDFAVLVAVLAP
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHH
AFLFAGSLQARPPTTFLALGITLTIPILSGLGTAYAGDFAASLNTVIAVFMAIGFGMVSM
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFQTIPVDAAITRLLHLSRRDVSRRALGGAPNEAHWTSLMIDRTALLLPRVRASRNTHW
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DLLDDTLRHLRLGHAVGQLRKTIPQLKGEVGNEVNDLLCAIAAGFSAKAPRGPVDPLEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RRIDTVTTRVAGSAIKTRLRVLDLLLDLRFALGSSNTADGTPTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]