| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593257
Identifier: 83593257
GI number: 83593257
Start: 2226552
End: 2227208
Strand: Reverse
Name: 83593257
Synonym: Rru_A1922
Alternate gene names: NA
Gene position: 2227208-2226552 (Counterclockwise)
Preceding gene: 83593260
Following gene: 83593248
Centisome position: 51.17
GC content: 67.58
Gene sequence:
>657_bases ATGGACATCGATTTCGTTTTCGATACCGCCTGCCCGTGGTGCCATATCGGCTGGCGCCGACTTCTCCATGCCCTGGCCGA GCGGCCCGAGGTCGTGGTCCGCCCGCGCTGGCGGCCCTTTTTGCTCAACCCGGAGATGCCGGCCGAGGGCATGGATCGCC GGCAGTATGTGGAACGCAAGTTCGGCGGCCCGCGCCGCGCCGCCCGCATGCTGGAAGCCGCCGAAAGCGCCGGCCGGCTG GTCGGGCTGGAGTTCCGCTTCGAGCGCATCAAGCGCACCCCCAACACCATCGATTCCCACCGCCTGCTGCGCCTGGGGCG TTCGACCAGCCAGCGCGAGGCGCTGTTTGACGCGCTGTTTCAGGCCTATTTCGTGGACGGCGAGGATATCGGCGACCGCG ATACGCTGATCGCGCTTGGCGTCGCCTGCGGCCTGGACGGGGCGCTTTTGCGCGAGCACCTCGCCGGCGGGGCCGAGATC GCCGAGGTGGTCAGCGAGAACACCCGCGCCCATGCCATCGGCATGAGCGGGGTTCCCGGCTTCATCTTCAACGGCCAGTT CGCCATTTCCGGCGCCCAGGAACCGGCGATCTTCATCCGCATGATTGACCTCGCCCTGGAAACCCAGGCCTTGCTGCCGG TGGCCTGTTCGTCGTAA
Upstream 100 bases:
>100_bases CGGATCCATGGCGTTGACCCCCGCGCATCCGGGGGTATAGTTCCCTGGGAATGACTAGGGGTTTCGCCCTGGCGCGCGAC CCCGCGATACTGGACCAACC
Downstream 100 bases:
>100_bases GGCGGGAAGCCCATCGTCGTCGCCCTCTGGTGCGGAATGGGCGCGATGGGCTCTCCAAGGCGAACTTAATGATCTTCAAA AGCGTCGATGACGGCGCGGT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Dsba Oxidoreductase; FrnE Protein; Dithiol-Disulfide Isomerase; Polyketide Biosynthesis Associated Protein; DSBA-Like Thioredoxin Family Protein; Protein Dithiol-Disulfide Isomerase; Thioredoxin Domain Protein DsbA Family; DSBA-Like Thioredoxin Domain-Containing Protein; Thiol Oxidoreductase FrnE; Oxidoreductase; Protein-Disulfide Isomerase; DsbA Oxidoreductase; Polyketide Synthase; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; DSBA-Like Thioredoxin Domain; Dsb Family Thioredoxin Protein; Protein Disulfide-Isomerase; Protein Disulfide Isomerase; Dsba Oxidoreductase Family Protein; Dithiol-Disulfide Isomerase Protein; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; Isomerase; Disulfide Isomerase; Thiol Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Disulfide Oxidoreductase; DsbA Family Oxidoreductase; Thioredoxin DSBA Oxidoreductase Family; Peptidoglycan Hydrolase
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MDIDFVFDTACPWCHIGWRRLLHALAERPEVVVRPRWRPFLLNPEMPAEGMDRRQYVERKFGGPRRAARMLEAAESAGRL VGLEFRFERIKRTPNTIDSHRLLRLGRSTSQREALFDALFQAYFVDGEDIGDRDTLIALGVACGLDGALLREHLAGGAEI AEVVSENTRAHAIGMSGVPGFIFNGQFAISGAQEPAIFIRMIDLALETQALLPVACSS
Sequences:
>Translated_218_residues MDIDFVFDTACPWCHIGWRRLLHALAERPEVVVRPRWRPFLLNPEMPAEGMDRRQYVERKFGGPRRAARMLEAAESAGRL VGLEFRFERIKRTPNTIDSHRLLRLGRSTSQREALFDALFQAYFVDGEDIGDRDTLIALGVACGLDGALLREHLAGGAEI AEVVSENTRAHAIGMSGVPGFIFNGQFAISGAQEPAIFIRMIDLALETQALLPVACSS >Mature_218_residues MDIDFVFDTACPWCHIGWRRLLHALAERPEVVVRPRWRPFLLNPEMPAEGMDRRQYVERKFGGPRRAARMLEAAESAGRL VGLEFRFERIKRTPNTIDSHRLLRLGRSTSQREALFDALFQAYFVDGEDIGDRDTLIALGVACGLDGALLREHLAGGAEI AEVVSENTRAHAIGMSGVPGFIFNGQFAISGAQEPAIFIRMIDLALETQALLPVACSS
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24263; Mature: 24263
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDFVFDTACPWCHIGWRRLLHALAERPEVVVRPRWRPFLLNPEMPAEGMDRRQYVERK CCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHH FGGPRRAARMLEAAESAGRLVGLEFRFERIKRTPNTIDSHRLLRLGRSTSQREALFDALF CCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH QAYFVDGEDIGDRDTLIALGVACGLDGALLREHLAGGAEIAEVVSENTRAHAIGMSGVPG HHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCC FIFNGQFAISGAQEPAIFIRMIDLALETQALLPVACSS EEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDIDFVFDTACPWCHIGWRRLLHALAERPEVVVRPRWRPFLLNPEMPAEGMDRRQYVERK CCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHH FGGPRRAARMLEAAESAGRLVGLEFRFERIKRTPNTIDSHRLLRLGRSTSQREALFDALF CCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH QAYFVDGEDIGDRDTLIALGVACGLDGALLREHLAGGAEIAEVVSENTRAHAIGMSGVPG HHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCC FIFNGQFAISGAQEPAIFIRMIDLALETQALLPVACSS EEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA