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The map label for this gene is yvoD [H]

Identifier: 83593234

GI number: 83593234

Start: 2200608

End: 2201576

Strand: Reverse

Name: yvoD [H]

Synonym: Rru_A1899

Alternate gene names: 83593234

Gene position: 2201576-2200608 (Counterclockwise)

Preceding gene: 83593236

Following gene: 83593229

Centisome position: 50.58

GC content: 63.98

Gene sequence:

>969_bases
ATGTCGGTGTTCGTTTTCCTGCGTACCTCGGGTCGTGAAGGGTTAGGGGTGTTCTGGACCCTGGCCAAGGTGATGATCCC
GGTGATGATCGGCGTGAAAGCGGTTGTGGAGCTTGGGCTTTTGCCCATTCTCGCCCGGGCTTTCGAACCGGTGATGGCCC
TGGTCGGCCTGCCTGCGGCAACCGGCTTGGTCTGGGTGACGGCCTTGCTGGTCAATATGTACGGCGGGGCGGCGGTCTTG
CTGGCGCTGATGCCCGACCTTCATCTGAGCGGCGCCCAGGTCACCATTTTGGGCGTGATGATCCTGATCGCCCATGCCAT
TCCCCTTGAGCAGCGCATCGCCCAACGCGCCGGCACCGGTTTCCTCTTTTCCACCCTGCTGCGCCTGGGCGGCGCCCTGT
GCCTGGGGGCGATCCTCAATGGCGTTTATCGGGCCGGCGACTGGCTGCAGGGCCCGGCGCCGGTCTCGATGGTGTCAAGC
GGATCGTCCGCCACCGAGCGCGGCAATTGGGCGGGATGGATCACCGATTCGCTCCATACCCTGGGCGTCATCATGATCAT
CGTCGTGTCGCTGGTCGTGCTGCTGCGCCTTATGGACAAGCTGGGGATCACCGCCCGCTTGACGGCGCTGCTCGCCCCGG
TTTTGGGTACCGTCGGCATCGGCGGGCGGGCAATGCCCCTGACCATGGTCGGCGTGCTGCTTGGGCTGTCCTATGGCGGG
GCTTTGATCATTCGCGAGGCCAAGGCCGGCACCATTCCCCGGCGCGACCTGTTCTTGTCGATCTGCCTGCTCAGCCTGAC
CCACAGCCTGATCGAGGATACCTTGTTCATCATGGCGCTGGGCGCCGATCTGACGGGCATCTTGCTGGCCCGCGTCGTCT
TCACCCTGATCGTGATCTGGGCGCTTGATAAGGTTTTGCGCGTCGTTCCCGAACGCACGGCCGAACGGTTATTGTTCGCC
AAGGCCTGA

Upstream 100 bases:

>100_bases
AGCTTGCGATGAAGCGCGGTTTTTGACCACTCCTTTCACCGTTCCGGGGCTATGATCTGGATCAATGCCTAATTTTCGAC
CATGCCTTGGAGCCTCTGCC

Downstream 100 bases:

>100_bases
TCGCCAAAAGATCCCCGGCGCCGAGCGGCGGGGATCTTTTTTTTGCGAAGACGGATTTGCCCTAATAGCTGCGGATCAGC
CCGACCAGCCGACCCTGGAT

Product: nucleoside recognition

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSVFVFLRTSGREGLGVFWTLAKVMIPVMIGVKAVVELGLLPILARAFEPVMALVGLPAATGLVWVTALLVNMYGGAAVL
LALMPDLHLSGAQVTILGVMILIAHAIPLEQRIAQRAGTGFLFSTLLRLGGALCLGAILNGVYRAGDWLQGPAPVSMVSS
GSSATERGNWAGWITDSLHTLGVIMIIVVSLVVLLRLMDKLGITARLTALLAPVLGTVGIGGRAMPLTMVGVLLGLSYGG
ALIIREAKAGTIPRRDLFLSICLLSLTHSLIEDTLFIMALGADLTGILLARVVFTLIVIWALDKVLRVVPERTAERLLFA
KA

Sequences:

>Translated_322_residues
MSVFVFLRTSGREGLGVFWTLAKVMIPVMIGVKAVVELGLLPILARAFEPVMALVGLPAATGLVWVTALLVNMYGGAAVL
LALMPDLHLSGAQVTILGVMILIAHAIPLEQRIAQRAGTGFLFSTLLRLGGALCLGAILNGVYRAGDWLQGPAPVSMVSS
GSSATERGNWAGWITDSLHTLGVIMIIVVSLVVLLRLMDKLGITARLTALLAPVLGTVGIGGRAMPLTMVGVLLGLSYGG
ALIIREAKAGTIPRRDLFLSICLLSLTHSLIEDTLFIMALGADLTGILLARVVFTLIVIWALDKVLRVVPERTAERLLFA
KA
>Mature_321_residues
SVFVFLRTSGREGLGVFWTLAKVMIPVMIGVKAVVELGLLPILARAFEPVMALVGLPAATGLVWVTALLVNMYGGAAVLL
ALMPDLHLSGAQVTILGVMILIAHAIPLEQRIAQRAGTGFLFSTLLRLGGALCLGAILNGVYRAGDWLQGPAPVSMVSSG
SSATERGNWAGWITDSLHTLGVIMIIVVSLVVLLRLMDKLGITARLTALLAPVLGTVGIGGRAMPLTMVGVLLGLSYGGA
LIIREAKAGTIPRRDLFLSICLLSLTHSLIEDTLFIMALGADLTGILLARVVFTLIVIWALDKVLRVVPERTAERLLFAK
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 34001; Mature: 33870

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFVFLRTSGREGLGVFWTLAKVMIPVMIGVKAVVELGLLPILARAFEPVMALVGLPAA
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TGLVWVTALLVNMYGGAAVLLALMPDLHLSGAQVTILGVMILIAHAIPLEQRIAQRAGTG
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCH
FLFSTLLRLGGALCLGAILNGVYRAGDWLQGPAPVSMVSSGSSATERGNWAGWITDSLHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH
LGVIMIIVVSLVVLLRLMDKLGITARLTALLAPVLGTVGIGGRAMPLTMVGVLLGLSYGG
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
ALIIREAKAGTIPRRDLFLSICLLSLTHSLIEDTLFIMALGADLTGILLARVVFTLIVIW
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALDKVLRVVPERTAERLLFAKA
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVFVFLRTSGREGLGVFWTLAKVMIPVMIGVKAVVELGLLPILARAFEPVMALVGLPAA
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TGLVWVTALLVNMYGGAAVLLALMPDLHLSGAQVTILGVMILIAHAIPLEQRIAQRAGTG
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCH
FLFSTLLRLGGALCLGAILNGVYRAGDWLQGPAPVSMVSSGSSATERGNWAGWITDSLHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH
LGVIMIIVVSLVVLLRLMDKLGITARLTALLAPVLGTVGIGGRAMPLTMVGVLLGLSYGG
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
ALIIREAKAGTIPRRDLFLSICLLSLTHSLIEDTLFIMALGADLTGILLARVVFTLIVIW
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALDKVLRVVPERTAERLLFAKA
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]