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The map label for this gene is yibQ [C]

Identifier: 83593228

GI number: 83593228

Start: 2193166

End: 2194464

Strand: Reverse

Name: yibQ [C]

Synonym: Rru_A1893

Alternate gene names: 83593228

Gene position: 2194464-2193166 (Counterclockwise)

Preceding gene: 83593229

Following gene: 83593227

Centisome position: 50.41

GC content: 69.05

Gene sequence:

>1299_bases
GTGCTTGATCATCCCGAAGACCGGGGAGTCCTCGATCGCTTCGCCTTTTTCGTCGCCCGCATGGCCCCCCTGACCCTGGT
TCTGGTCGCCCTCGCCACCTTGGCGGTCGGATTGGGCATTGGTTTCGCCGTTGGCCGACTGGCCCAGGGCGACAAGGCGG
CGCCTCCCGCGCCCACCGCCCTGGCGGCGATCGGTCCGCTGCCCGTTGCTCCGGCGGCCGGCGAGGCGGCCCATCAGTAT
CAACCGCCGCCGCTGCCCCGTCCCGCCGAGACCGCGCCCCCCCTTCCGGCCGACGTCGCCCCCCCGGTGCAAACGGCGCC
CGCCCCCTCGGAGACGCCGGCCGGCGAAAAGGGCGCGCTTCCGGCCGAATTTCGCGACCTGCTGGCCAGCGACGGTCCGG
GCTTCGTCATGGAGGAACGCCTTCCCGACGATGCCTATGTTCACAAGCCCCAGGTCAAGCCGACCGTCAAGACCGCCGCC
CTGGCCCCGGTCCCGCGCTTTCCCGAGGGACCGGCGGAGTCCAGCGGGCTGCCCTGGAAGACCTATGGCGTGGCGGCGGG
CAAATGGAGCAAGCCGGCGATCGCCCTGGTGATCGACGATATGGGGCTGGACCGGGTGCGTACGGAAAAGGTCCGCAAGC
TGGCCGGACCTTTGACCCTGGCCTATCTCGCCTATGCCGACGGGCTGGCCGGACAGATGCGCGGGGGCCGCAAGGCCGGC
CACGAGATCTTGATGCATATGCCGATGGAGCCCCTTGACGCCAAGGTCAATCCCGGACCCGGGGCGTTGAAGGTCGGTTT
GTCCGATGACGAGATCCTGACCCGCCTGCGCCGCAATCTTGACGGCGGCGCCGAATTCGTCGGTATCAACAACCACATGG
GCAGCCGCTTCACCGCCGACAGCCGGGGCATGACCCTGGTCATGGGCGAATTGAAAAAGCGCGGGCTGCTGTGGCTGGAT
TCGATGACCTCGGCCAATTCGGTGGGGCTGACCTTGGCCGAAATGGCCGGCGTTCCCCATATCGGTCGCACGGTGTTTTT
GGATAACCTCAACGATCAGGCCGCGGTCGCCCGCCAGCTCGCCAAGCTTGAGGCCGCCGCCCGCCAGCACGGCGTGGCGG
TGGGCATCGGCCACCCCCGCGACGGCACCATCGGCGCGCTGAGCGTCTGGTTGCCCGCCCTGGCCGCCAAGGGCATCACC
CTGGTGCCGATCAGCGCCCTGGTGACGACCAAGGACGCCGAGCTCGCCCATGCGCGGCCCAGCGGCAAGACAGCCTCGAC
ATCCCCGTCAACCGACTGA

Upstream 100 bases:

>100_bases
CCGATGCTCGCCGGTGCCGCCATGGCGCTGTCGAGCGTGTCGGTGGTGGCGAGTTCCCTATGGCTAAGGCGGTGGATGCC
GCCGTCCGGAGACCGTTTCC

Downstream 100 bases:

>100_bases
AAACAGGAGAGTTCCCAATGGCGAAGACTTATCTGGTGGGTGGCATGACCTGCGGCGGCTGCGCCCGTTCGGTCGAACGC
GCCATCAAATCGTTGACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MLDHPEDRGVLDRFAFFVARMAPLTLVLVALATLAVGLGIGFAVGRLAQGDKAAPPAPTALAAIGPLPVAPAAGEAAHQY
QPPPLPRPAETAPPLPADVAPPVQTAPAPSETPAGEKGALPAEFRDLLASDGPGFVMEERLPDDAYVHKPQVKPTVKTAA
LAPVPRFPEGPAESSGLPWKTYGVAAGKWSKPAIALVIDDMGLDRVRTEKVRKLAGPLTLAYLAYADGLAGQMRGGRKAG
HEILMHMPMEPLDAKVNPGPGALKVGLSDDEILTRLRRNLDGGAEFVGINNHMGSRFTADSRGMTLVMGELKKRGLLWLD
SMTSANSVGLTLAEMAGVPHIGRTVFLDNLNDQAAVARQLAKLEAAARQHGVAVGIGHPRDGTIGALSVWLPALAAKGIT
LVPISALVTTKDAELAHARPSGKTASTSPSTD

Sequences:

>Translated_432_residues
MLDHPEDRGVLDRFAFFVARMAPLTLVLVALATLAVGLGIGFAVGRLAQGDKAAPPAPTALAAIGPLPVAPAAGEAAHQY
QPPPLPRPAETAPPLPADVAPPVQTAPAPSETPAGEKGALPAEFRDLLASDGPGFVMEERLPDDAYVHKPQVKPTVKTAA
LAPVPRFPEGPAESSGLPWKTYGVAAGKWSKPAIALVIDDMGLDRVRTEKVRKLAGPLTLAYLAYADGLAGQMRGGRKAG
HEILMHMPMEPLDAKVNPGPGALKVGLSDDEILTRLRRNLDGGAEFVGINNHMGSRFTADSRGMTLVMGELKKRGLLWLD
SMTSANSVGLTLAEMAGVPHIGRTVFLDNLNDQAAVARQLAKLEAAARQHGVAVGIGHPRDGTIGALSVWLPALAAKGIT
LVPISALVTTKDAELAHARPSGKTASTSPSTD
>Mature_432_residues
MLDHPEDRGVLDRFAFFVARMAPLTLVLVALATLAVGLGIGFAVGRLAQGDKAAPPAPTALAAIGPLPVAPAAGEAAHQY
QPPPLPRPAETAPPLPADVAPPVQTAPAPSETPAGEKGALPAEFRDLLASDGPGFVMEERLPDDAYVHKPQVKPTVKTAA
LAPVPRFPEGPAESSGLPWKTYGVAAGKWSKPAIALVIDDMGLDRVRTEKVRKLAGPLTLAYLAYADGLAGQMRGGRKAG
HEILMHMPMEPLDAKVNPGPGALKVGLSDDEILTRLRRNLDGGAEFVGINNHMGSRFTADSRGMTLVMGELKKRGLLWLD
SMTSANSVGLTLAEMAGVPHIGRTVFLDNLNDQAAVARQLAKLEAAARQHGVAVGIGHPRDGTIGALSVWLPALAAKGIT
LVPISALVTTKDAELAHARPSGKTASTSPSTD

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibQ [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=226, Percent_Identity=34.070796460177, Blast_Score=115, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 44937; Mature: 44937

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDHPEDRGVLDRFAFFVARMAPLTLVLVALATLAVGLGIGFAVGRLAQGDKAAPPAPTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
LAAIGPLPVAPAAGEAAHQYQPPPLPRPAETAPPLPADVAPPVQTAPAPSETPAGEKGAL
HHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAEFRDLLASDGPGFVMEERLPDDAYVHKPQVKPTVKTAALAPVPRFPEGPAESSGLPWK
CHHHHHHHHCCCCCCEECCCCCCCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEE
TYGVAAGKWSKPAIALVIDDMGLDRVRTEKVRKLAGPLTLAYLAYADGLAGQMRGGRKAG
EEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHH
HEILMHMPMEPLDAKVNPGPGALKVGLSDDEILTRLRRNLDGGAEFVGINNHMGSRFTAD
HHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEECC
SRGMTLVMGELKKRGLLWLDSMTSANSVGLTLAEMAGVPHIGRTVFLDNLNDQAAVARQL
CCCCEEEEHHHHHCCEEEEECCCCCCCCCEEHHHHCCCCCCCCEEEEECCCHHHHHHHHH
AKLEAAARQHGVAVGIGHPRDGTIGALSVWLPALAAKGITLVPISALVTTKDAELAHARP
HHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHEECCCCHHHCCCC
SGKTASTSPSTD
CCCCCCCCCCCC
>Mature Secondary Structure
MLDHPEDRGVLDRFAFFVARMAPLTLVLVALATLAVGLGIGFAVGRLAQGDKAAPPAPTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
LAAIGPLPVAPAAGEAAHQYQPPPLPRPAETAPPLPADVAPPVQTAPAPSETPAGEKGAL
HHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAEFRDLLASDGPGFVMEERLPDDAYVHKPQVKPTVKTAALAPVPRFPEGPAESSGLPWK
CHHHHHHHHCCCCCCEECCCCCCCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEE
TYGVAAGKWSKPAIALVIDDMGLDRVRTEKVRKLAGPLTLAYLAYADGLAGQMRGGRKAG
EEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHH
HEILMHMPMEPLDAKVNPGPGALKVGLSDDEILTRLRRNLDGGAEFVGINNHMGSRFTAD
HHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEECC
SRGMTLVMGELKKRGLLWLDSMTSANSVGLTLAEMAGVPHIGRTVFLDNLNDQAAVARQL
CCCCEEEEHHHHHCCEEEEECCCCCCCCCEEHHHHCCCCCCCCEEEEECCCHHHHHHHHH
AKLEAAARQHGVAVGIGHPRDGTIGALSVWLPALAAKGITLVPISALVTTKDAELAHARP
HHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHEECCCCHHHCCCC
SGKTASTSPSTD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]