| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is pgpA [H]
Identifier: 83593204
GI number: 83593204
Start: 2167040
End: 2167600
Strand: Direct
Name: pgpA [H]
Synonym: Rru_A1869
Alternate gene names: 83593204
Gene position: 2167040-2167600 (Clockwise)
Preceding gene: 83593201
Following gene: 83593205
Centisome position: 49.78
GC content: 67.91
Gene sequence:
>561_bases ATGCCCCTTGACGCCCCCCCCCTTCTGCCGAGCGCCGACTCGGACTCCACCGTTTCCATCCTTCAGGCCAAGGGCGACGC GCCACCGGCCGCCGCCACCGCCGCCGTCGGTTGGCCCCTTTTGGCGCTGACCACCTGGTTCGGCTCGGGGTTGATCCCCC TGGCCCCGGGCACGATGGGCAGCATCGCCGCCCTGCCCTTCGCCTGGGCGATCGCCTGGACCTGGGGTCCCTGGGCCCTG GCCCCGGCCGCCGCCCTCGTCTTCGTCATCGGCACCCTGGCCGCCGAGGCCCATGTCCGCCGGTCGGGCGAAAAGGATCC CCAGCGCATCGTCATCGACGAGGTGGCCGGGCAATGGTTGACCCTGGCCGTCGCCCCCCTCGATCCGCTCGCTTACGGGG TTGGCTTGGTGCTGTTCCGAATTTGCGATATCACCAAGCCCTGGCCGGCCTGCTGGGCCGACCGCAGCGTTCCCGGCGGC TTTGGCATCATGCTTGATGATGGGTTCGCCGCCGTCTATTCCACTTGTATGATGGCGCTTTACGTCCATTATTTTATGTG A
Upstream 100 bases:
>100_bases GCGACCCCCTATCAAGGCAACCCTCTTAAAATCCGCCTTGACGTGATACAACAAAAAAATTCGACACCGCCTTGTGTGCC GCCCGGACCCGAGCCTTTTC
Downstream 100 bases:
>100_bases CCGATAAGGATTTGATATGACCGCCCCCTTCCCCAAGGATCTGGTTTTGCATGCCGAACAGGTCCTCGCGGCGCTGCGTG CCAAGGGCTTCATGCTGGCG
Product: phosphatidylglycerophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPLDAPPLLPSADSDSTVSILQAKGDAPPAAATAAVGWPLLALTTWFGSGLIPLAPGTMGSIAALPFAWAIAWTWGPWAL APAAALVFVIGTLAAEAHVRRSGEKDPQRIVIDEVAGQWLTLAVAPLDPLAYGVGLVLFRICDITKPWPACWADRSVPGG FGIMLDDGFAAVYSTCMMALYVHYFM
Sequences:
>Translated_186_residues MPLDAPPLLPSADSDSTVSILQAKGDAPPAAATAAVGWPLLALTTWFGSGLIPLAPGTMGSIAALPFAWAIAWTWGPWAL APAAALVFVIGTLAAEAHVRRSGEKDPQRIVIDEVAGQWLTLAVAPLDPLAYGVGLVLFRICDITKPWPACWADRSVPGG FGIMLDDGFAAVYSTCMMALYVHYFM >Mature_185_residues PLDAPPLLPSADSDSTVSILQAKGDAPPAAATAAVGWPLLALTTWFGSGLIPLAPGTMGSIAALPFAWAIAWTWGPWALA PAAALVFVIGTLAAEAHVRRSGEKDPQRIVIDEVAGQWLTLAVAPLDPLAYGVGLVLFRICDITKPWPACWADRSVPGGF GIMLDDGFAAVYSTCMMALYVHYFM
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=170, Percent_Identity=38.2352941176471, Blast_Score=103, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 19549; Mature: 19418
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDAPPLLPSADSDSTVSILQAKGDAPPAAATAAVGWPLLALTTWFGSGLIPLAPGTMG CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SIAALPFAWAIAWTWGPWALAPAAALVFVIGTLAAEAHVRRSGEKDPQRIVIDEVAGQWL HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEE TLAVAPLDPLAYGVGLVLFRICDITKPWPACWADRSVPGGFGIMLDDGFAAVYSTCMMAL EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHH YVHYFM HHHHHC >Mature Secondary Structure PLDAPPLLPSADSDSTVSILQAKGDAPPAAATAAVGWPLLALTTWFGSGLIPLAPGTMG CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SIAALPFAWAIAWTWGPWALAPAAALVFVIGTLAAEAHVRRSGEKDPQRIVIDEVAGQWL HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEE TLAVAPLDPLAYGVGLVLFRICDITKPWPACWADRSVPGGFGIMLDDGFAAVYSTCMMAL EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHH YVHYFM HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]