Click here to switch to the map view.

The map label for this gene is motB [H]

Identifier: 83593178

GI number: 83593178

Start: 2141988

End: 2143070

Strand: Direct

Name: motB [H]

Synonym: Rru_A1843

Alternate gene names: 83593178

Gene position: 2141988-2143070 (Clockwise)

Preceding gene: 83593177

Following gene: 83593179

Centisome position: 49.21

GC content: 67.96

Gene sequence:

>1083_bases
GTGGCCGACCAACCGATCATCATCAAGCGGATCAAAAAGGGCGGTCACGCCCATCATGGCGGCGCCTGGAAGCTGGCCTA
TGCCGACTTCGTGACGGCGATGATGGCCTTCTTCCTGCTGCTCTGGTTGCTCAATTCGGTCACCGAGGAGCAACTGGTCG
GCATCTCCAATTATTTCGCCCCGACGGCGGTCTCGCAAAGCCCAAGCGGCGCCGGCGGCGTTCTTGGCGGTCAGGTGCTG
GGCGAAGGGGCGAGCCAGTCCAATTCCTCGTCACCGGCCGTGCAGTTGACCCTGCCGCCGCCGACCATCGGCGCCGGCGG
TCAGGATTTCAGCGACGCCAACGAGGGCGTCGATGCCAGCGACAGCGATGACGACGCCGGCAAGGGCGAAGGCAAGGGGG
CCTCGGCGGGCGATCTGGAGGGGCTGGGCAAGCTTGGGGTCGAACCGACCGACAAGCAGTTGGCCGCCGCCGAGGAAAAG
CGCCAGCAAGAGGAATTCAACAAGACCGCCACCGAGCTGCGTCAGGCCATCCAGGCCGTCCCCTCGCTCCAGGCGCTGTC
GAACAGCTTGCTGATCGACAACACGCCCGAGGGTCTGCGCATCCAGTTGATCGACCGCGAGGGGCTGTCGATGTTCCCCA
CCGGCTCAAGCGCCCTGCTGCCCCATACCCGCGATCTGCTGGCTTTGGTGGCCAAGGCGGTGGCCGACGTTCCCAATAAG
ATCTCGATCTCGGGCCATACCGACGCCCCCCCCTATAGCGACCCCTCGGGCTATGGCAATTGGGAGCTGTCGGCCGACCG
CGCCCTGGCCAGCCGCCGCGTGTTGCTGGCCAATGGCCTGAAAGAGGACCGCGTCGACCGGGTGGTCGGCAAGGCCGAAA
CCGAACCCCTGCTCGCCGACGACCCCAAGGCCCCCAGCAACCGCCGGATCGCCATCACCTTGCTGCGCGATCGCTCGCTC
TATGCCGAAGGGGCGGCCGGCGGCGGTAATGGCGGGGCGGCGCCCGCCGACCCGCTGAGCGGCCCCAAGCCGCCCAGCAT
CCTGGCGCCCGCCGACGGCGGTCCCGGAGCGGCCCCGCGATGA

Upstream 100 bases:

>100_bases
GCCGAGCTTCGCCGAAGTCGAAGACACCGTAACCAACCTGTCGGATTAAGTCCCCCGCCACACACCGTAGCGGGCCGCGA
TCCCAAGAAACGAGGCGCCG

Downstream 100 bases:

>100_bases
GGCCGCCCCCCGCCCCCTTGGACGCCGACGCGGCCGATGCCGATGGCGTGATGGTCAAACGCGTCATCGCCTTCTTTATC
GATGTGCTGTGCATCGCCCT

Product: OmpA/MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MADQPIIIKRIKKGGHAHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFAPTAVSQSPSGAGGVLGGQVL
GEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDASDSDDDAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEK
RQQEEFNKTATELRQAIQAVPSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLALVAKAVADVPNK
ISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVDRVVGKAETEPLLADDPKAPSNRRIAITLLRDRSL
YAEGAAGGGNGGAAPADPLSGPKPPSILAPADGGPGAAPR

Sequences:

>Translated_360_residues
MADQPIIIKRIKKGGHAHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFAPTAVSQSPSGAGGVLGGQVL
GEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDASDSDDDAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEK
RQQEEFNKTATELRQAIQAVPSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLALVAKAVADVPNK
ISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVDRVVGKAETEPLLADDPKAPSNRRIAITLLRDRSL
YAEGAAGGGNGGAAPADPLSGPKPPSILAPADGGPGAAPR
>Mature_359_residues
ADQPIIIKRIKKGGHAHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFAPTAVSQSPSGAGGVLGGQVLG
EGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDASDSDDDAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEKR
QQEEFNKTATELRQAIQAVPSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLALVAKAVADVPNKI
SISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVDRVVGKAETEPLLADDPKAPSNRRIAITLLRDRSLY
AEGAAGGGNGGAAPADPLSGPKPPSILAPADGGPGAAPR

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=359, Percent_Identity=36.4902506963788, Blast_Score=184, Evalue=8e-48,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 37115; Mature: 36984

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00062 ALDOKETO_REDUCTASE_2 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQPIIIKRIKKGGHAHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFA
CCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTAVSQSPSGAGGVLGGQVLGEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDAS
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCC
DSDDDAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEKRQQEEFNKTATELRQAIQAV
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLALVAKAVADVPNK
CCHHHHHCCEEECCCCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCE
ISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVDRVVGKAETEPLLAD
EEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
DPKAPSNRRIAITLLRDRSLYAEGAAGGGNGGAAPADPLSGPKPPSILAPADGGPGAAPR
CCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
ADQPIIIKRIKKGGHAHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFA
CCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTAVSQSPSGAGGVLGGQVLGEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDAS
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCC
DSDDDAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEKRQQEEFNKTATELRQAIQAV
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLALVAKAVADVPNK
CCHHHHHCCEEECCCCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCE
ISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVDRVVGKAETEPLLAD
EEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
DPKAPSNRRIAITLLRDRSLYAEGAAGGGNGGAAPADPLSGPKPPSILAPADGGPGAAPR
CCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9139919; 11677609; 10586519 [H]