| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hsaB [H]
Identifier: 83593176
GI number: 83593176
Start: 2140357
End: 2140842
Strand: Reverse
Name: hsaB [H]
Synonym: Rru_A1841
Alternate gene names: 83593176
Gene position: 2140842-2140357 (Counterclockwise)
Preceding gene: 83593183
Following gene: 83593174
Centisome position: 49.18
GC content: 62.76
Gene sequence:
>486_bases ATGCCCTTCGACGACCGCGCATTCCGCAAAGCCCTTGGTTGTTTCGCCTCCGGGGTGACGGTCATCACCACCCTCGATGC CGCCCAGCGGCCGGTGGGGGTGACCGTCAGCGCCTTTTCCTCTCTCTCGCTCGACCCGCCCATGGTACTGTTTTGCCTTG GAAAATCCACCAGTAACCTTGAGGCGTTCCGTCAGGGGCCGGTCAGCATTTCCATATTGGCCGAGGGGCAACAGGATCTG TCGATTCGTTTCGCCAGCCGGGGGGTCGATAAATTCGCCGGGCTCGAGATGGATACCGCCCCGGGCGGCGTTCCCGCCCC CAAGGATGTCTTGGCGCGGCTCGACTGCGTCATCACCCAGACCATCGAGGGCGGGGATCATCTGATCGTGCTCTGCGCGG TCGAGGATCTTATCACCCGCACCGGTGGCCAACCCTTGGTCTATTTCCGGGGCAGCTATACCCAAGTCGGCGTGCTACCC GTCTGA
Upstream 100 bases:
>100_bases AGGCGGAAATATCCCCAAAAATCGCCCGGGGTTTGCCATTTCCGCCGGTCAGGCCCAAATAATCCCGAACGTCCCTGTTC ATTCAGATCCGGAGTCCTCC
Downstream 100 bases:
>100_bases CCACAGGCGGGGCGGCCGCCCTCTTTAGCGGTCGCCCACCGGTTCGAGGATGAGATGGCCGCCCGAGGGGTCGGCGCCAT CGACGGTGATCAGCGCGCCG
Product: flavin reductase-like, FMN-binding
Products: NAD(+); reduced flavin [C]
Alternate protein names: Flavin:NADH reductase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPFDDRAFRKALGCFASGVTVITTLDAAQRPVGVTVSAFSSLSLDPPMVLFCLGKSTSNLEAFRQGPVSISILAEGQQDL SIRFASRGVDKFAGLEMDTAPGGVPAPKDVLARLDCVITQTIEGGDHLIVLCAVEDLITRTGGQPLVYFRGSYTQVGVLP V
Sequences:
>Translated_161_residues MPFDDRAFRKALGCFASGVTVITTLDAAQRPVGVTVSAFSSLSLDPPMVLFCLGKSTSNLEAFRQGPVSISILAEGQQDL SIRFASRGVDKFAGLEMDTAPGGVPAPKDVLARLDCVITQTIEGGDHLIVLCAVEDLITRTGGQPLVYFRGSYTQVGVLP V >Mature_160_residues PFDDRAFRKALGCFASGVTVITTLDAAQRPVGVTVSAFSSLSLDPPMVLFCLGKSTSNLEAFRQGPVSISILAEGQQDLS IRFASRGVDKFAGLEMDTAPGGVPAPKDVLARLDCVITQTIEGGDHLIVLCAVEDLITRTGGQPLVYFRGSYTQVGVLPV
Specific function: Catalyzes the reduction of free flavins (FMN or FAD) by NADH. Subsequently, the reduced flavins diffuse to the HsaA oxygenase subunit [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the non-flavoprotein flavin reductase family [H]
Homologues:
Organism=Escherichia coli, GI87081819, Length=153, Percent_Identity=33.9869281045752, Blast_Score=85, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 17004; Mature: 16873
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDDRAFRKALGCFASGVTVITTLDAAQRPVGVTVSAFSSLSLDPPMVLFCLGKSTSNL CCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEHHCCCCCCCCEEEEEECCCCCCH EAFRQGPVSISILAEGQQDLSIRFASRGVDKFAGLEMDTAPGGVPAPKDVLARLDCVITQ HHHHCCCEEEEEEECCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHEEE TIEGGDHLIVLCAVEDLITRTGGQPLVYFRGSYTQVGVLPV EECCCCEEEEEEEHHHHHHHCCCCEEEEEECCCEEEEEECC >Mature Secondary Structure PFDDRAFRKALGCFASGVTVITTLDAAQRPVGVTVSAFSSLSLDPPMVLFCLGKSTSNL CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEHHCCCCCCCCEEEEEECCCCCCH EAFRQGPVSISILAEGQQDLSIRFASRGVDKFAGLEMDTAPGGVPAPKDVLARLDCVITQ HHHHCCCEEEEEEECCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHEEE TIEGGDHLIVLCAVEDLITRTGGQPLVYFRGSYTQVGVLPV EECCCCEEEEEEEHHHHHHHCCCCEEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA