| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593173
Identifier: 83593173
GI number: 83593173
Start: 2135776
End: 2136636
Strand: Reverse
Name: 83593173
Synonym: Rru_A1838
Alternate gene names: NA
Gene position: 2136636-2135776 (Counterclockwise)
Preceding gene: 83593174
Following gene: 83593170
Centisome position: 49.09
GC content: 67.25
Gene sequence:
>861_bases ATGACGAAACCCCTGCTTCAGCTTCAAGACAGCGTCGCCGTGCTGCGTCCCGAGGGCTTCCGCCATATGGCCTATGTGGA ATGGCGCGGCGATCATGACGCGCCGCCGGCCTTTTGCGTTCATGGCCTGACTCGCAACGGCCGCGATTTCGACGCGTTGG CCCAGGCCCTGGCGGCGAGCCGGCGGGTGTTCTGCCCCGATGTTCTGGGACGCGGGCGCAGCGATTGTCTGACCGATCCG GCGGGCTATGCCAATCTCGCCTATGCCGCCGATATGGTGACGCTGATCGCGCGCGGCGGCGGCGGCGCCATCGATTGGGT GGGAACCTCGATGGGCGGGTTGATCGGCATGATCCTCGCCGCCATGCCGGGCAGCCCGATCCGCAGGCTGGTGCTCAACG ATGTCGGGCCCTTCGTTCCGCAGGCGGCGATGGCGCGCATTCGCGACTATGTCGGCTATGACCCGGTTTTTGATACCCTG GCCGAGCTTGAAGCCTATCTGCGCAAGGTTCACGCCCCCTTTGGCCCGCTGAGCGATGGCCAATGGCGGACGATGGCCGA GCATGGGCATTGGCGGATCGAGGGGGGGCGCTACAAGCTGGCGCGCGACCCGGCGATCGCCGTGCCGATCAAGGCCGCTC CGCTGGCCGACGTTTCGCTGTGGCCGCTGTGGGATGCCATCACCTGTCCGGTGCTGGTGATTCGCGGCGCCGAGTCCGAC CTGTTGACAGCCGAGACCGTGGCCGAGATGGCCGGTCGCGGGCCGGGCTGCACGGTGGTCGAAGTGGCCGGCGTCGGTCA CGCCCCGGCGCTGCTGACGGCCGATCAGATCGCCCCGATCGTCGATTTTCTGGTGAAATGA
Upstream 100 bases:
>100_bases CGGCGACAGCGCCGCCGGATCGGCCTTTGCCCGGTACCGTTCCGCCGGCGACCCCCGGGTCGTCCTTTCTCCGTGGCTTG GGACCGTAAGTGAGAGACCG
Downstream 100 bases:
>100_bases GGGGCGTTAAAAAACGGCCTTGATCCAGGCCGTTAACCAGAAAAGCCGCGATGGGGGATAAGGCGGTTCCGCCCCGTCCC CCATCGCTCTCGAAAATCAG
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolase Alpha/Beta Fold Family Protein; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAASRRVFCPDVLGRGRSDCLTDP AGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILAAMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTL AELEAYLRKVHAPFGPLSDGQWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK
Sequences:
>Translated_286_residues MTKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAASRRVFCPDVLGRGRSDCLTDP AGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILAAMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTL AELEAYLRKVHAPFGPLSDGQWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK >Mature_285_residues TKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAASRRVFCPDVLGRGRSDCLTDPA GYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILAAMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTLA ELEAYLRKVHAPFGPLSDGQWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESDL LTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30601; Mature: 30469
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAAS CCCCHHHHHCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHC RRVFCPDVLGRGRSDCLTDPAGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILA CCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH AMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTLAELEAYLRKVHAPFGPLSDG HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC QWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD CCHHHHHCCCEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEECCCCC LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAAS CCCHHHHHCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHC RRVFCPDVLGRGRSDCLTDPAGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILA CCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH AMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTLAELEAYLRKVHAPFGPLSDG HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC QWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD CCHHHHHCCCEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEECCCCC LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA