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The map label for this gene is ybhS [H]

Identifier: 83593126

GI number: 83593126

Start: 2082380

End: 2083510

Strand: Reverse

Name: ybhS [H]

Synonym: Rru_A1791

Alternate gene names: 83593126

Gene position: 2083510-2082380 (Counterclockwise)

Preceding gene: 83593127

Following gene: 83593125

Centisome position: 47.87

GC content: 60.12

Gene sequence:

>1131_bases
ATGAGCCTTCGCGGGTCTCTGGGACGCCGGCGCTTCCTTGCCCTGGTGCGCAAGGAGGTGTTTCAGATCCTGCGCGATCC
AAGCAGCATCCTGATCGCCTTCGTCCTGCCTTTCATTCTGATCTTTCTCTTCGGCTTCGCCGTTTCGCTTGATGCCAAGC
GGACGAAGATCGGGCTGGTGGTCGAAAGCCCGACCCCTCTGACCCAGGATCTGGCCGCCAGTTTTCAAGGATCGCGCTAT
TTCGAGGTCACCCGGGGGTATGACCGCCGCCCCTTTGAAGACGATCTGGTCGCCGGTCGGCTGAAGGGCATCGTGGTGAT
CCCGGCGACCTTCGCGGCCGATCAGGCGACGCAGGCGCGGCCCGCCCTTCAGGTCATCGTCGACGGCTCCGATCCCAATA
CGGCGAATTTCGTTCAGAACTACGCCAAAGGCGTCGTCGAGACCTGGAGCCGGATAAGCGCCGGCGACGCCAAGGCCGCC
GCTCCGGCCATCGCCATCGAACAGCGCTACTGGTTCAATCCCGAACTGGAAAGCCGCAACTTCCTGGTTCCGGGATCAAT
CGTCATCGTCATGACCCTGGTTGGCACCTTGTTGACCTCCCTGGTCGTCGCCCGCGAGTGGGAACGCGGAACAATGGAGG
CGATGATGGCGACGCCGGTCACCGCCTTGGAGTTATTGGTGGGAAAGGTGCTGCCCTATTTTTTCCTGGGGCTGATTTCG
ATGACGCTTTGCGTCTTGCTGGCCGTTTTCGCCTTCGGTGTGCCGTTCCGCGGCTCGGTGCTGGCGCTTTATATGATCTC
GGCGATCTTTCTGCTGCCGGCCCTTGGCCAGGGGTTGGTGATTTCGGCGGTGACGAAGAACCAGTTTCTCGCCTCGCAGT
TGGCGCTGATCTCGGCTTTCCTGCCGTCGTTCATGCTTTCGGGATTTCTGTTCGAAATCGACTCCATGCCGCGACTGATC
CAGGCGATCACTACGATCGTCGCCGCGCGCTATGTGATTCCCAGCCTGCAGACGGTGTTTCTCGCCGGGGATATCTGGCC
GATGTTTCTACAAAATATCGCGATCACCTTGGGGATCGGGGCGGTGTTTTTTGCCCTTGCCCTGGTCAATACCCGCAAGA
GGATTGGTTGA

Upstream 100 bases:

>100_bases
GGGCATTGAAGGCGCGGGTCGCCACGCCCGAGGCGCCCGACCCGACGATGGAGGACGCCTTCATCGCCCTGATCGGCGCC
TCGGGGGCGGGGGGGCAATC

Downstream 100 bases:

>100_bases
GATGGGCGGAGGAACGCGGCTCAAAGCGTTGATCGTCAAGGAATTCCTGGCGATTTTGCGCGATCCGAAAGGTCGGATGA
TCCTGATCGTCCCGCCGCTG

Product: ABC-2 transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSLRGSLGRRRFLALVRKEVFQILRDPSSILIAFVLPFILIFLFGFAVSLDAKRTKIGLVVESPTPLTQDLAASFQGSRY
FEVTRGYDRRPFEDDLVAGRLKGIVVIPATFAADQATQARPALQVIVDGSDPNTANFVQNYAKGVVETWSRISAGDAKAA
APAIAIEQRYWFNPELESRNFLVPGSIVIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTALELLVGKVLPYFFLGLIS
MTLCVLLAVFAFGVPFRGSVLALYMISAIFLLPALGQGLVISAVTKNQFLASQLALISAFLPSFMLSGFLFEIDSMPRLI
QAITTIVAARYVIPSLQTVFLAGDIWPMFLQNIAITLGIGAVFFALALVNTRKRIG

Sequences:

>Translated_376_residues
MSLRGSLGRRRFLALVRKEVFQILRDPSSILIAFVLPFILIFLFGFAVSLDAKRTKIGLVVESPTPLTQDLAASFQGSRY
FEVTRGYDRRPFEDDLVAGRLKGIVVIPATFAADQATQARPALQVIVDGSDPNTANFVQNYAKGVVETWSRISAGDAKAA
APAIAIEQRYWFNPELESRNFLVPGSIVIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTALELLVGKVLPYFFLGLIS
MTLCVLLAVFAFGVPFRGSVLALYMISAIFLLPALGQGLVISAVTKNQFLASQLALISAFLPSFMLSGFLFEIDSMPRLI
QAITTIVAARYVIPSLQTVFLAGDIWPMFLQNIAITLGIGAVFFALALVNTRKRIG
>Mature_375_residues
SLRGSLGRRRFLALVRKEVFQILRDPSSILIAFVLPFILIFLFGFAVSLDAKRTKIGLVVESPTPLTQDLAASFQGSRYF
EVTRGYDRRPFEDDLVAGRLKGIVVIPATFAADQATQARPALQVIVDGSDPNTANFVQNYAKGVVETWSRISAGDAKAAA
PAIAIEQRYWFNPELESRNFLVPGSIVIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTALELLVGKVLPYFFLGLISM
TLCVLLAVFAFGVPFRGSVLALYMISAIFLLPALGQGLVISAVTKNQFLASQLALISAFLPSFMLSGFLFEIDSMPRLIQ
AITTIVAARYVIPSLQTVFLAGDIWPMFLQNIAITLGIGAVFFALALVNTRKRIG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=371, Percent_Identity=46.900269541779, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1787010, Length=373, Percent_Identity=27.8820375335121, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI48994943, Length=315, Percent_Identity=30.4761904761905, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI226510979, Length=290, Percent_Identity=27.5862068965517, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41051; Mature: 40920

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRGSLGRRRFLALVRKEVFQILRDPSSILIAFVLPFILIFLFGFAVSLDAKRTKIGLV
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
VESPTPLTQDLAASFQGSRYFEVTRGYDRRPFEDDLVAGRLKGIVVIPATFAADQATQAR
EECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEECHHHCCCHHHCC
PALQVIVDGSDPNTANFVQNYAKGVVETWSRISAGDAKAAAPAIAIEQRYWFNPELESRN
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHEECCCCCCCCCCCCCC
FLVPGSIVIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTALELLVGKVLPYFFLGLIS
EECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTLCVLLAVFAFGVPFRGSVLALYMISAIFLLPALGQGLVISAVTKNQFLASQLALISAF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
LPSFMLSGFLFEIDSMPRLIQAITTIVAARYVIPSLQTVFLAGDIWPMFLQNIAITLGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AVFFALALVNTRKRIG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLRGSLGRRRFLALVRKEVFQILRDPSSILIAFVLPFILIFLFGFAVSLDAKRTKIGLV
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
VESPTPLTQDLAASFQGSRYFEVTRGYDRRPFEDDLVAGRLKGIVVIPATFAADQATQAR
EECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEECHHHCCCHHHCC
PALQVIVDGSDPNTANFVQNYAKGVVETWSRISAGDAKAAAPAIAIEQRYWFNPELESRN
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHEECCCCCCCCCCCCCC
FLVPGSIVIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTALELLVGKVLPYFFLGLIS
EECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTLCVLLAVFAFGVPFRGSVLALYMISAIFLLPALGQGLVISAVTKNQFLASQLALISAF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
LPSFMLSGFLFEIDSMPRLIQAITTIVAARYVIPSLQTVFLAGDIWPMFLQNIAITLGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AVFFALALVNTRKRIG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]