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The map label for this gene is ykhA [H]

Identifier: 83593054

GI number: 83593054

Start: 2011791

End: 2012582

Strand: Direct

Name: ykhA [H]

Synonym: Rru_A1719

Alternate gene names: 83593054

Gene position: 2011791-2012582 (Clockwise)

Preceding gene: 83593053

Following gene: 83593055

Centisome position: 46.22

GC content: 67.93

Gene sequence:

>792_bases
ATGACCGACCGATCCGCGGGGACGGCGGCCGCGACCCGGCTGGTCGATATCGTCTTCCCCGAGCACACCAACCACCATGG
CACGCTGTTTGGCGGCATCGGCCTTGCCCATATGGACAAGGTCGCCTTCATCGCCGCCTCGCGCCATGCCCATGTCGAAT
TCGTCACCGCGTCGTGCGAGCAGGTCGATTTCGCCGCCCCCACCCATCTCGGCGAGATCGTCGAACTGGTCGGATCGGTC
ACCCGCGTCGGCCGGCGATCCTTGGGCGTCGAGGTCGAATTGATCGCCGAGGTGCCGCTTTCGGGCGAACGCCGACACTG
CGGCCGGGGGCTCTTCACCCTGGTCGCGCTCGGCGAGGGACTGGAGGCCCGGGGTGGCGCCTTGCCACCGCTGCGCCCCG
GGGCCGAAGCCGCCGTGCCGCCGCCACCGACCGACGACGCCCTGCGCATGGTCGAGATGGTCTTTCCCGAACACACTAGC
CACTACGGCAGTCTTTATGGCGGCAATGCCCTGGCCGCCATGGGCAAGGCGGCCTTCATCGCCGCCACCCGCCATTGCCG
CAAAACCATCGTCATGGCCTCGTCGCGTCGGGTCGATTTCAAAAGCCAGATCCACAAGGGCGAAATCGTCGAACTGATCC
CCCGCGTCACCGGGGTCGGGCGGACCTCGCTGACCGTCGAGGTCGAACTGTGGGCCGAAGACCTGCTCTCGGGCGACCGC
CGTCTGTGCGGATTGGGCCATTTCATCATGGTCGCGGTGGACGCCCTCCACCGCCCCACCGTCGCCGCCTGA

Upstream 100 bases:

>100_bases
GGCTGAAGACCCGCCACTGGGACGAGGTGCGGCCGGCGCTGGTCAATATGGTGGCGGCGGCCCGCGCCCTGCGGGCGGTG
CTGCTGACGGGAGAGGATCA

Downstream 100 bases:

>100_bases
TCGAAGCGCCGCTCGGGGAGGCCTAGGCGCCTCCCCGGGACTGTTCGTCAACCATCACGCATTGATATCAATCTCCGCAG
CAAGATCCTTCTTGCTCTTG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTDRSAGTAAATRLVDIVFPEHTNHHGTLFGGIGLAHMDKVAFIAASRHAHVEFVTASCEQVDFAAPTHLGEIVELVGSV
TRVGRRSLGVEVELIAEVPLSGERRHCGRGLFTLVALGEGLEARGGALPPLRPGAEAAVPPPPTDDALRMVEMVFPEHTS
HYGSLYGGNALAAMGKAAFIAATRHCRKTIVMASSRRVDFKSQIHKGEIVELIPRVTGVGRTSLTVEVELWAEDLLSGDR
RLCGLGHFIMVAVDALHRPTVAA

Sequences:

>Translated_263_residues
MTDRSAGTAAATRLVDIVFPEHTNHHGTLFGGIGLAHMDKVAFIAASRHAHVEFVTASCEQVDFAAPTHLGEIVELVGSV
TRVGRRSLGVEVELIAEVPLSGERRHCGRGLFTLVALGEGLEARGGALPPLRPGAEAAVPPPPTDDALRMVEMVFPEHTS
HYGSLYGGNALAAMGKAAFIAATRHCRKTIVMASSRRVDFKSQIHKGEIVELIPRVTGVGRTSLTVEVELWAEDLLSGDR
RLCGLGHFIMVAVDALHRPTVAA
>Mature_262_residues
TDRSAGTAAATRLVDIVFPEHTNHHGTLFGGIGLAHMDKVAFIAASRHAHVEFVTASCEQVDFAAPTHLGEIVELVGSVT
RVGRRSLGVEVELIAEVPLSGERRHCGRGLFTLVALGEGLEARGGALPPLRPGAEAAVPPPPTDDALRMVEMVFPEHTSH
YGSLYGGNALAAMGKAAFIAATRHCRKTIVMASSRRVDFKSQIHKGEIVELIPRVTGVGRTSLTVEVELWAEDLLSGDRR
LCGLGHFIMVAVDALHRPTVAA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 28013; Mature: 27881

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRSAGTAAATRLVDIVFPEHTNHHGTLFGGIGLAHMDKVAFIAASRHAHVEFVTASCE
CCCCCCCHHHHHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHEEECCCCEEEEEECCCC
QVDFAAPTHLGEIVELVGSVTRVGRRSLGVEVELIAEVPLSGERRHCGRGLFTLVALGEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHEEHHHCCC
LEARGGALPPLRPGAEAAVPPPPTDDALRMVEMVFPEHTSHYGSLYGGNALAAMGKAAFI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AATRHCRKTIVMASSRRVDFKSQIHKGEIVELIPRVTGVGRTSLTVEVELWAEDLLSGDR
HHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCC
RLCGLGHFIMVAVDALHRPTVAA
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDRSAGTAAATRLVDIVFPEHTNHHGTLFGGIGLAHMDKVAFIAASRHAHVEFVTASCE
CCCCCCHHHHHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHEEECCCCEEEEEECCCC
QVDFAAPTHLGEIVELVGSVTRVGRRSLGVEVELIAEVPLSGERRHCGRGLFTLVALGEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHEEHHHCCC
LEARGGALPPLRPGAEAAVPPPPTDDALRMVEMVFPEHTSHYGSLYGGNALAAMGKAAFI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AATRHCRKTIVMASSRRVDFKSQIHKGEIVELIPRVTGVGRTSLTVEVELWAEDLLSGDR
HHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCC
RLCGLGHFIMVAVDALHRPTVAA
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377; 10568751 [H]