| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593051
Identifier: 83593051
GI number: 83593051
Start: 2008140
End: 2008547
Strand: Reverse
Name: 83593051
Synonym: Rru_A1716
Alternate gene names: NA
Gene position: 2008547-2008140 (Counterclockwise)
Preceding gene: 83593052
Following gene: 83593050
Centisome position: 46.14
GC content: 67.4
Gene sequence:
>408_bases ATGAGCGTTTTTTGGCCCCCTTTGCTGGGGGGGATGCTGCTTGGCTTGTCGGCGGCGCTGCTGCTGATCGGCAATGGCAA GGTCGCCGGAATCAGCGGCATGGCCGGACGGCTGCTGCAGGGCCAGAGCCGGGTCGAAAGCGCGGTTTTCCTGATCGGTC TGCTGCTTGGACCGGCGCTTTACGCCCTGATCGTCGGGGCTTGGCCGGCGGTGACGATCGTCGCCTCCTGGCCGGTCATC GTCATCGCCGGCCTTTTGGTGGGCTTTGGCACGCGGATGGGCTCGGGCTGCACCTCGGGCCACGGGATTGTCGGTCTGGC CCGCCTGTCGCGGCGCTCCCTGGCCGCCACCGCGACCTTCCTGGTCTGCGGCGTTTTGACCGCCTCGCTGATGGGGATCT TGCGATGA
Upstream 100 bases:
>100_bases GGCGCGAGGCCAAGCAGGTCTTCTATCGCCTGACCGACGCCAAGGCGGCACGGCTTGTCGAAGCCCTTTACACGATCTTC TGCGTCGAGGAGGGAACGCC
Downstream 100 bases:
>100_bases GCACCAGAACCGCTTTGCTCCGTCTGGCGCTTGGCCTGCTGGCCGGCGGCCTGTTCGGCTTCGGCCTGGCGCTTTCGGGC ATGATCGATCCGGCCCGGGT
Product: YeeE/YedE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSVFWPPLLGGMLLGLSAALLLIGNGKVAGISGMAGRLLQGQSRVESAVFLIGLLLGPALYALIVGAWPAVTIVASWPVI VIAGLLVGFGTRMGSGCTSGHGIVGLARLSRRSLAATATFLVCGVLTASLMGILR
Sequences:
>Translated_135_residues MSVFWPPLLGGMLLGLSAALLLIGNGKVAGISGMAGRLLQGQSRVESAVFLIGLLLGPALYALIVGAWPAVTIVASWPVI VIAGLLVGFGTRMGSGCTSGHGIVGLARLSRRSLAATATFLVCGVLTASLMGILR >Mature_134_residues SVFWPPLLGGMLLGLSAALLLIGNGKVAGISGMAGRLLQGQSRVESAVFLIGLLLGPALYALIVGAWPAVTIVASWPVIV IAGLLVGFGTRMGSGCTSGHGIVGLARLSRRSLAATATFLVCGVLTASLMGILR
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 13628; Mature: 13497
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFWPPLLGGMLLGLSAALLLIGNGKVAGISGMAGRLLQGQSRVESAVFLIGLLLGPAL CCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YALIVGAWPAVTIVASWPVIVIAGLLVGFGTRMGSGCTSGHGIVGLARLSRRSLAATATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LVCGVLTASLMGILR HHHHHHHHHHHHHCC >Mature Secondary Structure SVFWPPLLGGMLLGLSAALLLIGNGKVAGISGMAGRLLQGQSRVESAVFLIGLLLGPAL CCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YALIVGAWPAVTIVASWPVIVIAGLLVGFGTRMGSGCTSGHGIVGLARLSRRSLAATATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LVCGVLTASLMGILR HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]