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The map label for this gene is yjgH [H]

Identifier: 83593046

GI number: 83593046

Start: 2003823

End: 2004230

Strand: Direct

Name: yjgH [H]

Synonym: Rru_A1711

Alternate gene names: 83593046

Gene position: 2003823-2004230 (Clockwise)

Preceding gene: 83593033

Following gene: 83593049

Centisome position: 46.04

GC content: 64.46

Gene sequence:

>408_bases
ATGACCAAAGCCACCGCCGTTTTTCCCGAGACCCGTCACGCCCTTTACGAGGCGCATGGCTATTCGGCCGCGATCCGCTC
GGGCGATCTGTTGTTCGTCTCCGGTCAGGTGGGCAGCCGGGCCGACGGTTCGCCGGAACCGGACTTCGTCGAGCAGGTCC
GGCGGGCGTTCTCCAATCTGAAGGCGACGCTGGCGGCGGGGGGATGCACCTTCGACGACCTCGTCGATGTCACGACCTTT
CATACCAACCCCGAGCAGCAAATCGCCGCCGTCATGACGGTGAAGAACGAAGTCTTCCCAAAGCCTCCCTATCCGAACTG
GACGGCCGTCGGCGTGACCTGGCTCGCCGGCTTCGACTTCGAGATCAAGGTCATCGCCCGCATCCCGGTCGCCAACGGAC
GCCCGTGA

Upstream 100 bases:

>100_bases
GCACGATGTATATCCGCTACGCGGCAGGCGCGATGCCCTTGATACTCCCTTTTCCAGTCCGTCCGGTCGCGCGGCGGAGG
GTTCCGAAGGATCCTGTGTC

Downstream 100 bases:

>100_bases
GCGACCTCACATCGATCGAACCTTGCGCAGGAACGCGTCGACGCGGGTTTCCAGGTCGTCGGCTTGGTGGGACATCGATT
GGGCGACGCTGAGAAGCTCG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTKATAVFPETRHALYEAHGYSAAIRSGDLLFVSGQVGSRADGSPEPDFVEQVRRAFSNLKATLAAGGCTFDDLVDVTTF
HTNPEQQIAAVMTVKNEVFPKPPYPNWTAVGVTWLAGFDFEIKVIARIPVANGRP

Sequences:

>Translated_135_residues
MTKATAVFPETRHALYEAHGYSAAIRSGDLLFVSGQVGSRADGSPEPDFVEQVRRAFSNLKATLAAGGCTFDDLVDVTTF
HTNPEQQIAAVMTVKNEVFPKPPYPNWTAVGVTWLAGFDFEIKVIARIPVANGRP
>Mature_134_residues
TKATAVFPETRHALYEAHGYSAAIRSGDLLFVSGQVGSRADGSPEPDFVEQVRRAFSNLKATLAAGGCTFDDLVDVTTFH
TNPEQQIAAVMTVKNEVFPKPPYPNWTAVGVTWLAGFDFEIKVIARIPVANGRP

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=129, Percent_Identity=77.5193798449613, Blast_Score=216, Evalue=6e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14639; Mature: 14507

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKATAVFPETRHALYEAHGYSAAIRSGDLLFVSGQVGSRADGSPEPDFVEQVRRAFSNL
CCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
KATLAAGGCTFDDLVDVTTFHTNPEQQIAAVMTVKNEVFPKPPYPNWTAVGVTWLAGFDF
HEEECCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
EIKVIARIPVANGRP
EEEEEEEECCCCCCC
>Mature Secondary Structure 
TKATAVFPETRHALYEAHGYSAAIRSGDLLFVSGQVGSRADGSPEPDFVEQVRRAFSNL
CCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
KATLAAGGCTFDDLVDVTTFHTNPEQQIAAVMTVKNEVFPKPPYPNWTAVGVTWLAGFDF
HEEECCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
EIKVIARIPVANGRP
EEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]