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The map label for this gene is 83592977

Identifier: 83592977

GI number: 83592977

Start: 1930640

End: 1931647

Strand: Reverse

Name: 83592977

Synonym: Rru_A1642

Alternate gene names: NA

Gene position: 1931647-1930640 (Counterclockwise)

Preceding gene: 83592978

Following gene: 83592976

Centisome position: 44.38

GC content: 65.08

Gene sequence:

>1008_bases
ATGCCTTGCCTTCGCCAAGCGGCCTTCCCTTCGCGGGTTTCTCGCGGTCTCGTCATCGCCCTGGTTTGCGCCCTCGTTCA
TACCCTCGCCGGCCCGATCGCCGCGGCGCGGGCCGAGGATAAGCCGGCCCCGGCCAAGGTGTCGGTCCTGCTCGACTGGT
TCATCAATCCCGACCACGGGCCGCTGATCGTCGCCCAGGACCTGGGCTACTTCAAGGACGCCGGCCTCGAGGTCGATCTG
GTGGCCCCGGCCGACCCCAATGATCCGCCCAAGCTGGTCGCCGCCGGCAAGGCCGATATCGCCGTCGGCTATCAGCCGCA
ATTGGTGATGCAGGTGGCCGAAGGCTTGCCGCTGATGCGCTTTGGCACGCTGGTCGCCACGCCGCTCAACTGCCTTGTCG
TGCTCAAGGACGGGCCGATCAAATCCGTGGCCGATCTCAAGGGCCGCAAGGTGGGCTTTTCCGTTGGCGGCTTCGAAGAC
GCCCTGCTTGGCGCCATGCTCGACAACGCCGGGGTCAAGGCCGACGAGGTGACCCTGGTCAATGTCAATTTCTCGCTGTC
GCCGGCGGTGATCTCGGGGCAGGTCGACGCGGTGATCGGCCCCTTCCGCAATTTCGAGCTTAATCAGATGGATCTGGCCG
GCCATCCCGGCACCGCCTTCTATCCCGAAGAACATGGGGTGCCGCTTTATGACGAACTGGTGTTCGTCACCAATATCGCC
CTCAAAGGCGATCCCCGCCTGGTCGCCTTCCTCGACGCGGTGGAACGGGGCACCCATTACATCGTCAATCACCCCGAAGA
GGCCTGGACCCTGTTCAAGGCCCATTCCCCCGATCTTGACGACGAGCTGAACCACCGCGCCTGGATCGATACGGTCGCCC
GGTTCTCGATGACCCCGGGCGCCCTGGACGAGCGGCGCTATGCCCGCTTCGCCGGCTTTCTTCAGTCCCGCGGCCTGATC
AAGACCGTGCCGCCTTTGGCCTCCTACGCCATCGAACCCGGCCTCTGA

Upstream 100 bases:

>100_bases
AGCCGAGGATGCGGGCCTTTTGTCGATAAGGACTCGCCACCGGCGGTGTCAGGATCTAACCTTTCGCGCTTTCCGAACTC
AGGATGAGGTTCACGCGATC

Downstream 100 bases:

>100_bases
GCCCGTTCCGGGGGACTCGATCCTTTCGGGTCCCCCCCTTCCTTTAGGGGTTGTCGGCCCGAGCGACCCGCGCCTATAGT
GTCGCCAAAATCGACGGAGC

Product: putative sulfonate/nitrate transport system substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MPCLRQAAFPSRVSRGLVIALVCALVHTLAGPIAAARAEDKPAPAKVSVLLDWFINPDHGPLIVAQDLGYFKDAGLEVDL
VAPADPNDPPKLVAAGKADIAVGYQPQLVMQVAEGLPLMRFGTLVATPLNCLVVLKDGPIKSVADLKGRKVGFSVGGFED
ALLGAMLDNAGVKADEVTLVNVNFSLSPAVISGQVDAVIGPFRNFELNQMDLAGHPGTAFYPEEHGVPLYDELVFVTNIA
LKGDPRLVAFLDAVERGTHYIVNHPEEAWTLFKAHSPDLDDELNHRAWIDTVARFSMTPGALDERRYARFAGFLQSRGLI
KTVPPLASYAIEPGL

Sequences:

>Translated_335_residues
MPCLRQAAFPSRVSRGLVIALVCALVHTLAGPIAAARAEDKPAPAKVSVLLDWFINPDHGPLIVAQDLGYFKDAGLEVDL
VAPADPNDPPKLVAAGKADIAVGYQPQLVMQVAEGLPLMRFGTLVATPLNCLVVLKDGPIKSVADLKGRKVGFSVGGFED
ALLGAMLDNAGVKADEVTLVNVNFSLSPAVISGQVDAVIGPFRNFELNQMDLAGHPGTAFYPEEHGVPLYDELVFVTNIA
LKGDPRLVAFLDAVERGTHYIVNHPEEAWTLFKAHSPDLDDELNHRAWIDTVARFSMTPGALDERRYARFAGFLQSRGLI
KTVPPLASYAIEPGL
>Mature_334_residues
PCLRQAAFPSRVSRGLVIALVCALVHTLAGPIAAARAEDKPAPAKVSVLLDWFINPDHGPLIVAQDLGYFKDAGLEVDLV
APADPNDPPKLVAAGKADIAVGYQPQLVMQVAEGLPLMRFGTLVATPLNCLVVLKDGPIKSVADLKGRKVGFSVGGFEDA
LLGAMLDNAGVKADEVTLVNVNFSLSPAVISGQVDAVIGPFRNFELNQMDLAGHPGTAFYPEEHGVPLYDELVFVTNIAL
KGDPRLVAFLDAVERGTHYIVNHPEEAWTLFKAHSPDLDDELNHRAWIDTVARFSMTPGALDERRYARFAGFLQSRGLIK
TVPPLASYAIEPGL

Specific function: Probably involved in thiamine biosynthesis [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NMT1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319957, Length=269, Percent_Identity=26.7657992565056, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6321050, Length=269, Percent_Identity=26.7657992565056, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323997, Length=269, Percent_Identity=26.7657992565056, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6322616, Length=269, Percent_Identity=26.3940520446097, Blast_Score=112, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35929; Mature: 35798

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCLRQAAFPSRVSRGLVIALVCALVHTLAGPIAAARAEDKPAPAKVSVLLDWFINPDHG
CCCCHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCC
PLIVAQDLGYFKDAGLEVDLVAPADPNDPPKLVAAGKADIAVGYQPQLVMQVAEGLPLMR
CEEEECCCCCHHHCCEEEEEECCCCCCCCCCEEECCCCCEEECCCHHHHHHHHCCCCCHH
FGTLVATPLNCLVVLKDGPIKSVADLKGRKVGFSVGGFEDALLGAMLDNAGVKADEVTLV
HHHHHHCCCEEEEEECCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEE
NVNFSLSPAVISGQVDAVIGPFRNFELNQMDLAGHPGTAFYPEEHGVPLYDELVFVTNIA
EECCEECCCEECCCHHEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHEEEEEEEE
LKGDPRLVAFLDAVERGTHYIVNHPEEAWTLFKAHSPDLDDELNHRAWIDTVARFSMTPG
ECCCCCEEHEEHHHHCCCEEEEECCHHHEEEEECCCCCCCCHHCHHHHHHHHHHHCCCCC
ALDERRYARFAGFLQSRGLIKTVPPLASYAIEPGL
CCHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCC
>Mature Secondary Structure 
PCLRQAAFPSRVSRGLVIALVCALVHTLAGPIAAARAEDKPAPAKVSVLLDWFINPDHG
CCCHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCC
PLIVAQDLGYFKDAGLEVDLVAPADPNDPPKLVAAGKADIAVGYQPQLVMQVAEGLPLMR
CEEEECCCCCHHHCCEEEEEECCCCCCCCCCEEECCCCCEEECCCHHHHHHHHCCCCCHH
FGTLVATPLNCLVVLKDGPIKSVADLKGRKVGFSVGGFEDALLGAMLDNAGVKADEVTLV
HHHHHHCCCEEEEEECCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEE
NVNFSLSPAVISGQVDAVIGPFRNFELNQMDLAGHPGTAFYPEEHGVPLYDELVFVTNIA
EECCEECCCEECCCHHEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHEEEEEEEE
LKGDPRLVAFLDAVERGTHYIVNHPEEAWTLFKAHSPDLDDELNHRAWIDTVARFSMTPG
ECCCCCEEHEEHHHHCCCEEEEECCHHHEEEEECCCCCCCCHHCHHHHHHHHHHHCCCCC
ALDERRYARFAGFLQSRGLIKTVPPLASYAIEPGL
CCHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]