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The map label for this gene is mcp4 [H]

Identifier: 83592919

GI number: 83592919

Start: 1867326

End: 1868996

Strand: Direct

Name: mcp4 [H]

Synonym: Rru_A1584

Alternate gene names: 83592919

Gene position: 1867326-1868996 (Clockwise)

Preceding gene: 83592918

Following gene: 83592920

Centisome position: 42.9

GC content: 65.29

Gene sequence:

>1671_bases
ATGCTTCGCAACAAAAGAGTCGTCGTCAAGATTTCGGTCATCGTCGCCATCATGGGACTCGCGTTGTGCGTGACCGTCGG
CTGGCTGCTTAAGTCTCAATATGACGCCCTTCTCGATGAGCGGGTGGCCCAGACGCGCGGGCTGACCGAGGCCGCCGCCG
GGGTGGCGACCAAGCTGCAGGCCGAGGTCTCCGCCGGTAAAATCAGCCGCGATCAGGCGATTGGGACCTGGAAGACGGCG
CTCAACGGCATGATTTACGGCGGCAATGGCTATCTCTTCGCCTATGCCATGGACGGCATCAATCTGGTTCTGCCGCCACG
TCCCGATCTGGTCGGCAAGCCGGCGGCCGATAGGGGAGTCTTCCTCGCCCTTCAAGCGGCGGCGAGGCGGGGACCGGGGG
GCGGGCGGGTTGATTATGTCTGGCCCCGGGTCAAGGACGGGCCGCCCATCCCCAAGGTGAGTTGGGCGATGGAGGTTCCG
TCCTGGGACTTGCTGGTGGGGACGGGGGTCTATGTCGACGATGTCCAGGCGATTTTCTGGGCGAAACTGCGCGAAGCGAT
GCTGATCGGTGGCCTGCTGAGCGCGGTCGCCCTCTTGCTGGTCTCGCTGATCTCCCGCGACCTTTCGGCGGTTCTGGGTG
ATATCGCCAAGCGCATGGCGTTGATTTCCGGCGGCAAGATCGATATCGCCGTGCCCCATCAGGATCGGCGCGACGAGGCC
GGAGCCATGGCGCGCTCCCTTGAGGTCTTTCGCGGCACGGTGGCCGAGACCGAGAAATTGCGCGGCGATCAGGAACGCCT
CAAGGCCTCGGCCGAAGCGGCGCGCAAGGCCAATCTGGTCGAGTTGGCCAAGCGCTTCGAGGATTCGGTCAATAGCGTGG
CCCAGGCGGTCGCCAAGGGGGCGCGGACGATGGACGAAAACGCCAGGACGATGTTCAGCCTGGCCAATGTCACCCGGGAG
AAGGCCGGCCAGTCCTCGGCGATGAGCGAGCGCACCAACGCCACCTTCCAAACGGTGGCCTCGGCGTCGGAACAACTCTC
GGCCTCGATCCGCGAAATCGCCAACCAGACCGACAAGGCGCGGGTCACCAGCCAGCAGGCGGTGGAAACCGCCGATCAAT
CGGCCGATCGCATGGCCGGGCTGGTCGATGACGCCGAAAAGATCGGCGCGGTGATTACCTTGATCGAGACCATCGCCAGC
CAGACCAATCTGCTGGCGTTGAACGCCACGATCGAGGCGGCGCGGGCCGGCGACGCCGGCAAGGGCTTCGCCGTGGTCGC
CCATGAGGTCAAGAACCTGTCGACCCAGACCCGCAAGGCGACCGAGGACATTCGGGGTCAGATCGAACGGGTCCGCGCCT
CGGTTTCGGCCGCCGCCAGCGATATCGCCACGATCAGCGACGTCATCCACGATATCGCCAAGGCGGCCGGGGCGATCAGC
ATCGCCGTCGAGGAACAGGGCGCGGCGACGACCGAGATTTCGCGCAGCGTGCAAGAGGTTTTGTCGACTTCGGCCGACGC
CTCGCGCGATATCCACACCCTGGCCGAAGCGGCCCGGGAAACCGAAAGCACCGCCGGCGCCTTGCGCGACACCGCCGGCG
AGCTTGGTCAGGCGGCGGCCAGCTTGCAAGAAAAGGTCGACGGCTTCCTGGGTGATCTGCGGCAAGGATAA

Upstream 100 bases:

>100_bases
CCCCTGCCTCCCCGCCCTTGTGTTTCGGTTGCGCCAATGGGGAAAACGGCACAAATTCGTCGGGCGGATCAGGGGAAGTG
CGAAGCCCACGGATAACGCG

Downstream 100 bases:

>100_bases
GGGAAAGGGGCCCTTTCAGCGCGATCGGTCTTTTTCTTGCGCTCTTTGCGTGCTGGGGTAAACTGGTCAGGCAAGCGGAG
GAGGGGGCGATGAGGGCATT

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MLRNKRVVVKISVIVAIMGLALCVTVGWLLKSQYDALLDERVAQTRGLTEAAAGVATKLQAEVSAGKISRDQAIGTWKTA
LNGMIYGGNGYLFAYAMDGINLVLPPRPDLVGKPAADRGVFLALQAAARRGPGGGRVDYVWPRVKDGPPIPKVSWAMEVP
SWDLLVGTGVYVDDVQAIFWAKLREAMLIGGLLSAVALLLVSLISRDLSAVLGDIAKRMALISGGKIDIAVPHQDRRDEA
GAMARSLEVFRGTVAETEKLRGDQERLKASAEAARKANLVELAKRFEDSVNSVAQAVAKGARTMDENARTMFSLANVTRE
KAGQSSAMSERTNATFQTVASASEQLSASIREIANQTDKARVTSQQAVETADQSADRMAGLVDDAEKIGAVITLIETIAS
QTNLLALNATIEAARAGDAGKGFAVVAHEVKNLSTQTRKATEDIRGQIERVRASVSAAASDIATISDVIHDIAKAAGAIS
IAVEEQGAATTEISRSVQEVLSTSADASRDIHTLAEAARETESTAGALRDTAGELGQAAASLQEKVDGFLGDLRQG

Sequences:

>Translated_556_residues
MLRNKRVVVKISVIVAIMGLALCVTVGWLLKSQYDALLDERVAQTRGLTEAAAGVATKLQAEVSAGKISRDQAIGTWKTA
LNGMIYGGNGYLFAYAMDGINLVLPPRPDLVGKPAADRGVFLALQAAARRGPGGGRVDYVWPRVKDGPPIPKVSWAMEVP
SWDLLVGTGVYVDDVQAIFWAKLREAMLIGGLLSAVALLLVSLISRDLSAVLGDIAKRMALISGGKIDIAVPHQDRRDEA
GAMARSLEVFRGTVAETEKLRGDQERLKASAEAARKANLVELAKRFEDSVNSVAQAVAKGARTMDENARTMFSLANVTRE
KAGQSSAMSERTNATFQTVASASEQLSASIREIANQTDKARVTSQQAVETADQSADRMAGLVDDAEKIGAVITLIETIAS
QTNLLALNATIEAARAGDAGKGFAVVAHEVKNLSTQTRKATEDIRGQIERVRASVSAAASDIATISDVIHDIAKAAGAIS
IAVEEQGAATTEISRSVQEVLSTSADASRDIHTLAEAARETESTAGALRDTAGELGQAAASLQEKVDGFLGDLRQG
>Mature_556_residues
MLRNKRVVVKISVIVAIMGLALCVTVGWLLKSQYDALLDERVAQTRGLTEAAAGVATKLQAEVSAGKISRDQAIGTWKTA
LNGMIYGGNGYLFAYAMDGINLVLPPRPDLVGKPAADRGVFLALQAAARRGPGGGRVDYVWPRVKDGPPIPKVSWAMEVP
SWDLLVGTGVYVDDVQAIFWAKLREAMLIGGLLSAVALLLVSLISRDLSAVLGDIAKRMALISGGKIDIAVPHQDRRDEA
GAMARSLEVFRGTVAETEKLRGDQERLKASAEAARKANLVELAKRFEDSVNSVAQAVAKGARTMDENARTMFSLANVTRE
KAGQSSAMSERTNATFQTVASASEQLSASIREIANQTDKARVTSQQAVETADQSADRMAGLVDDAEKIGAVITLIETIAS
QTNLLALNATIEAARAGDAGKGFAVVAHEVKNLSTQTRKATEDIRGQIERVRASVSAAASDIATISDVIHDIAKAAGAIS
IAVEEQGAATTEISRSVQEVLSTSADASRDIHTLAEAARETESTAGALRDTAGELGQAAASLQEKVDGFLGDLRQG

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=193, Percent_Identity=33.6787564766839, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787690, Length=232, Percent_Identity=33.1896551724138, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI2367378, Length=195, Percent_Identity=32.3076923076923, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1788194, Length=189, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1789453, Length=219, Percent_Identity=32.4200913242009, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58668; Mature: 58668

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNKRVVVKISVIVAIMGLALCVTVGWLLKSQYDALLDERVAQTRGLTEAAAGVATKLQ
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AEVSAGKISRDQAIGTWKTALNGMIYGGNGYLFAYAMDGINLVLPPRPDLVGKPAADRGV
HHHHHCCCCHHHHHHHHHHHHCCEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCH
FLALQAAARRGPGGGRVDYVWPRVKDGPPIPKVSWAMEVPSWDLLVGTGVYVDDVQAIFW
HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHH
AKLREAMLIGGLLSAVALLLVSLISRDLSAVLGDIAKRMALISGGKIDIAVPHQDRRDEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
GAMARSLEVFRGTVAETEKLRGDQERLKASAEAARKANLVELAKRFEDSVNSVAQAVAKG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTMDENARTMFSLANVTREKAGQSSAMSERTNATFQTVASASEQLSASIREIANQTDKA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHH
RVTSQQAVETADQSADRMAGLVDDAEKIGAVITLIETIASQTNLLALNATIEAARAGDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCC
KGFAVVAHEVKNLSTQTRKATEDIRGQIERVRASVSAAASDIATISDVIHDIAKAAGAIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
IAVEEQGAATTEISRSVQEVLSTSADASRDIHTLAEAARETESTAGALRDTAGELGQAAA
EEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQEKVDGFLGDLRQG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRNKRVVVKISVIVAIMGLALCVTVGWLLKSQYDALLDERVAQTRGLTEAAAGVATKLQ
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AEVSAGKISRDQAIGTWKTALNGMIYGGNGYLFAYAMDGINLVLPPRPDLVGKPAADRGV
HHHHHCCCCHHHHHHHHHHHHCCEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCH
FLALQAAARRGPGGGRVDYVWPRVKDGPPIPKVSWAMEVPSWDLLVGTGVYVDDVQAIFW
HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHH
AKLREAMLIGGLLSAVALLLVSLISRDLSAVLGDIAKRMALISGGKIDIAVPHQDRRDEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
GAMARSLEVFRGTVAETEKLRGDQERLKASAEAARKANLVELAKRFEDSVNSVAQAVAKG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTMDENARTMFSLANVTREKAGQSSAMSERTNATFQTVASASEQLSASIREIANQTDKA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHH
RVTSQQAVETADQSADRMAGLVDDAEKIGAVITLIETIASQTNLLALNATIEAARAGDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCC
KGFAVVAHEVKNLSTQTRKATEDIRGQIERVRASVSAAASDIATISDVIHDIAKAAGAIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
IAVEEQGAATTEISRSVQEVLSTSADASRDIHTLAEAARETESTAGALRDTAGELGQAAA
EEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQEKVDGFLGDLRQG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]