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The map label for this gene is 83592850

Identifier: 83592850

GI number: 83592850

Start: 1789275

End: 1789652

Strand: Reverse

Name: 83592850

Synonym: Rru_A1515

Alternate gene names: NA

Gene position: 1789652-1789275 (Counterclockwise)

Preceding gene: 83592851

Following gene: 83592845

Centisome position: 41.11

GC content: 64.02

Gene sequence:

>378_bases
ATGATCCTGGCGGCCCACATCCAGCCCGCCGATGTCCAGGACCGCGATGGTGCGTTGCCGGTGCTAAAGGAGGTCCGCCG
CCTGTTCCCGTTCATCGAGCGCGTCTTCGCCGACGGCGGCTACCAAGGAGCTTCCACGGCGGCGGCGGTGCGCGAACTGG
GGATGTGGCACCTGGAAATCGTCAAGCGCTCCGACACCACCAAGGGATTCGAGGTGCTGCCAAAACGCTGGATCGTCGAA
CGTACCTTCGGCTGGCTCGGCCGCTGCCGACGCCTTGCCAAGGACTTCGAGAACCTGTCCCGGATGGCTCTGGCCTTCCT
GCGTCTCGCCATGATTCGCCTCATGCTGCGCAGAATCGCAAGGCTCCGGAAATCATAG

Upstream 100 bases:

>100_bases
AGGGCGCGGAAAAAGGGGGGCGCGGATCGACCCGTCTGGCTATGACGCAGGTAAGAAAGTCAAAGGTAAGAAGCGGCACA
TCGTCGTCGACAGGCTCGCC

Downstream 100 bases:

>100_bases
GAAACTTCGCGGACGGACTCTAACTTCTCCTACGCCGGTTCTTCGCTATGTCGCGTTCTGAAAATACGAACAACGCCTCC
ACGAAGCCGCCATTTCAGTT

Product: IS4 family transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase Of; Transposase IS5 Family Protein; Transposase And Inactivated Derivatives-Like Protein; IS5 Family Transposase; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; Transposase Is4 Family; IS3/IS4 Family Insertion Sequence Transposase Protein; Transposase IS5 Family; Insertion Sequence Transposase Truncated Protein; Transposase Fragment; Transposase Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MILAAHIQPADVQDRDGALPVLKEVRRLFPFIERVFADGGYQGASTAAAVRELGMWHLEIVKRSDTTKGFEVLPKRWIVE
RTFGWLGRCRRLAKDFENLSRMALAFLRLAMIRLMLRRIARLRKS

Sequences:

>Translated_125_residues
MILAAHIQPADVQDRDGALPVLKEVRRLFPFIERVFADGGYQGASTAAAVRELGMWHLEIVKRSDTTKGFEVLPKRWIVE
RTFGWLGRCRRLAKDFENLSRMALAFLRLAMIRLMLRRIARLRKS
>Mature_125_residues
MILAAHIQPADVQDRDGALPVLKEVRRLFPFIERVFADGGYQGASTAAAVRELGMWHLEIVKRSDTTKGFEVLPKRWIVE
RTFGWLGRCRRLAKDFENLSRMALAFLRLAMIRLMLRRIARLRKS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14465; Mature: 14465

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILAAHIQPADVQDRDGALPVLKEVRRLFPFIERVFADGGYQGASTAAAVRELGMWHLEI
CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VKRSDTTKGFEVLPKRWIVERTFGWLGRCRRLAKDFENLSRMALAFLRLAMIRLMLRRIA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRKS
HHHCC
>Mature Secondary Structure
MILAAHIQPADVQDRDGALPVLKEVRRLFPFIERVFADGGYQGASTAAAVRELGMWHLEI
CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VKRSDTTKGFEVLPKRWIVERTFGWLGRCRRLAKDFENLSRMALAFLRLAMIRLMLRRIA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRKS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA