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The map label for this gene is ybgL [C]

Identifier: 83592840

GI number: 83592840

Start: 1778108

End: 1778896

Strand: Reverse

Name: ybgL [C]

Synonym: Rru_A1504

Alternate gene names: 83592840

Gene position: 1778896-1778108 (Counterclockwise)

Preceding gene: 83592841

Following gene: 83592839

Centisome position: 40.87

GC content: 68.95

Gene sequence:

>789_bases
ATGACCCTGCGGGTGAATGTCAATGCCGATCTGGGGGAGGGCTATGGCGCCTACCGCATCGGCGACGACGCGGCGATGCT
CGACATCGTGCGCTCGGCCAATATCGCTTGCGGCTTCCATGCCGGGGATCCGCTGGTGATGGCGCGCACCGTTCATCTGG
CGCTGGCGCGCGGCGTCAGCCTGGGCGCCCATCCCGGCTTCCCCGATCTCCAGGGCTTTGGCCGGCGGCCGATGACGATG
AGCCTCGCCGAAATCGAAGCCATGGTCGCCTATCAGATCGGCGCCCTGCAGGCGATCGCCACGGCGGCCGGCGGAAGGGT
CAGCCATGTCAAACCCCACGGCGCCCTCAGCACCATGGCCGCCGTCGATCACGCCCTGGCCCTGGCCATCGCCAAGGCGA
TCAAGGCCGTCGATCCCGGGCTGATCTCGCTGGCCCCGGCGGGTTCGCGGATGGTCGAGGCCGGGCGGACCCTGGGTCTG
GCGGTGGTCGAAGAGGTTTTCGCCGATCGCAATTACGATGACGCCGGGGCGCTGCTGCCGCGCTCCCACCCGAGGGCGCT
GATCCATGTGCCCGAGGAGGCCGCCGAGCATGGGCTGCGCATGCTGACCGAGGGCATCATTCTTTCGGCCAATGGCCGGG
AAATCCCCTGCGCCGCCCGCTCGATCTGCGTTCACGGCGACGCCCCCGGAGCGGTGGCCCTGGCGGCCTATCTGCGCTGC
TTCCTGGAGGATCACGATCTGGAGGTCGTGCCTGTGCCCGAGGTGCTTGGCGAGCAAAACGCCCCCTGA

Upstream 100 bases:

>100_bases
TATACCAATAACCTGATTTCCGGGATGGTCATGTCGGGCGAGGCGGACGAGGATGATCCCCCTTATTGAAGCACATCCCG
AGCACCGAAAGGACCCGGCC

Downstream 100 bases:

>100_bases
AAACGCCTCGTCGCTGGCACCGCGCCGGGACGATGCCTATATGGGGGCGACGAGACCGGGGGGCCCCCGGTCCCGCGCTC
CCCGCTTTGGCTTGCCTAGG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTLRVNVNADLGEGYGAYRIGDDAAMLDIVRSANIACGFHAGDPLVMARTVHLALARGVSLGAHPGFPDLQGFGRRPMTM
SLAEIEAMVAYQIGALQAIATAAGGRVSHVKPHGALSTMAAVDHALALAIAKAIKAVDPGLISLAPAGSRMVEAGRTLGL
AVVEEVFADRNYDDAGALLPRSHPRALIHVPEEAAEHGLRMLTEGIILSANGREIPCAARSICVHGDAPGAVALAAYLRC
FLEDHDLEVVPVPEVLGEQNAP

Sequences:

>Translated_262_residues
MTLRVNVNADLGEGYGAYRIGDDAAMLDIVRSANIACGFHAGDPLVMARTVHLALARGVSLGAHPGFPDLQGFGRRPMTM
SLAEIEAMVAYQIGALQAIATAAGGRVSHVKPHGALSTMAAVDHALALAIAKAIKAVDPGLISLAPAGSRMVEAGRTLGL
AVVEEVFADRNYDDAGALLPRSHPRALIHVPEEAAEHGLRMLTEGIILSANGREIPCAARSICVHGDAPGAVALAAYLRC
FLEDHDLEVVPVPEVLGEQNAP
>Mature_261_residues
TLRVNVNADLGEGYGAYRIGDDAAMLDIVRSANIACGFHAGDPLVMARTVHLALARGVSLGAHPGFPDLQGFGRRPMTMS
LAEIEAMVAYQIGALQAIATAAGGRVSHVKPHGALSTMAAVDHALALAIAKAIKAVDPGLISLAPAGSRMVEAGRTLGLA
VVEEVFADRNYDDAGALLPRSHPRALIHVPEEAAEHGLRMLTEGIILSANGREIPCAARSICVHGDAPGAVALAAYLRCF
LEDHDLEVVPVPEVLGEQNAP

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=237, Percent_Identity=47.2573839662447, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27250; Mature: 27119

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00338 SOMATOTROPIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRVNVNADLGEGYGAYRIGDDAAMLDIVRSANIACGFHAGDPLVMARTVHLALARGVS
CEEEEEECCCCCCCCCCEEECCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCC
LGAHPGFPDLQGFGRRPMTMSLAEIEAMVAYQIGALQAIATAAGGRVSHVKPHGALSTMA
CCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
AVDHALALAIAKAIKAVDPGLISLAPAGSRMVEAGRTLGLAVVEEVFADRNYDDAGALLP
HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC
RSHPRALIHVPEEAAEHGLRMLTEGIILSANGREIPCAARSICVHGDAPGAVALAAYLRC
CCCCCEEEECCHHHHHHHHHHHHCCEEEECCCCCCCHHHCEEEEECCCCHHHHHHHHHHH
FLEDHDLEVVPVPEVLGEQNAP
HHCCCCEEEEECHHHHCCCCCC
>Mature Secondary Structure 
TLRVNVNADLGEGYGAYRIGDDAAMLDIVRSANIACGFHAGDPLVMARTVHLALARGVS
EEEEEECCCCCCCCCCEEECCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCC
LGAHPGFPDLQGFGRRPMTMSLAEIEAMVAYQIGALQAIATAAGGRVSHVKPHGALSTMA
CCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
AVDHALALAIAKAIKAVDPGLISLAPAGSRMVEAGRTLGLAVVEEVFADRNYDDAGALLP
HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC
RSHPRALIHVPEEAAEHGLRMLTEGIILSANGREIPCAARSICVHGDAPGAVALAAYLRC
CCCCCEEEECCHHHHHHHHHHHHCCEEEECCCCCCCHHHCEEEEECCCCHHHHHHHHHHH
FLEDHDLEVVPVPEVLGEQNAP
HHCCCCEEEEECHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA