| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592830
Identifier: 83592830
GI number: 83592830
Start: 1764386
End: 1765768
Strand: Direct
Name: 83592830
Synonym: Rru_A1494
Alternate gene names: NA
Gene position: 1764386-1765768 (Clockwise)
Preceding gene: 83592827
Following gene: 83592831
Centisome position: 40.53
GC content: 69.49
Gene sequence:
>1383_bases ATGCGGACAGTTTTAGGGGAAGACCACGAAACGATGCGGGAGCGGACGAGAAGGCAAGGCGAATCTTTCGCCGATTTCTT GGCGCATCTGGCCGCGGTCTTCGGTCCGCAGGCCCTTTGCGTCCGCCACGAGCTTTACTTCCTGATCGTAACCCCCACCG GATTTCGTCCAGGTTGGAGGCAGGCCCTACGCGCTTTGGGGGCTTTGGCGCGCGACGCTGGCTTGCTGTGGCTGCGCATC GCGCCGCCGCCCCCCCCGCCGACGGCGGCGGTTTTTCTGGTGGCGACCCTGCCGGGGGCCAATGGCTGGGAGGTCTTGAA AAGCGGCCTTCCCGCCCTGCCGGCGAAAACCCCGGCCTGCGCCGTTCTTCACCCCCGCCTGTGGCCCCGGCTGGGGCCAA GCCTGGGCTTGTGGTGGGGCAGGCCGCCGCGCTGGGACGGGGTGGATGCCACCAGTCTGCCCTATCCGCCGTTGTCGGCC CTGTGGCAGGCGGCGCGTCTGGCCCTGCCCGCCCTGTCGTGTCGCGACGGCGCCATCAGCCGTGTCGCCGTCGCCGCCAC CCTGGCCCGCCATGGCCTGTGGCGGGCGGCTTGGCGGCGGCTGGCCCGCTCCCGACGCGGCGTGCTGGTCTTGCACAACG ATTTCGACATGATGAGCGCCGCCTGTCTTGGGCTGGGCCCGCCGACGGTTTGTCTGCAGCACGGGGTGCCGACCGACGAG TTCTTTCCCGCCCGCGCCGATGTTCAGGTGGTTTGGGGCCCCTCCAGCCGCGCCGCCTATGCGGAGGGCGGCGTGGAGCG CGAGCGTTTGGTCGTCGATGCCCTGGGCCGGGGCGAGGGCGCGATCGCCGCTTCGGGCCCGCCCGCCGGCTTCGCCCTGA TCTCCCAGGGCCATACCCCGCTTTATGGCCCGGGGCTTGGCGCCAAGCTTCTGGATCTGGCCCGCGACCTAGCCCCCTTG CTTCCCGATGGTCTGGATCTGCTGCTTCATCCGGCCGAAGACCCCGGGTCGCCGGCCTATGCCGGGGTAAAGGGGCTGAG GGTGTCGGTGCCGCCCCATGGCCTGCTGCGCCGGGGGCAGACGGGGCGATCCTGGCTGGTCGCTGGCTTCAGTTCCACGG CGCTGATCGATGCGGCGGTGGCCGGACATTACGTGGTCGGGCTGGATTGGCCCCTGCCGGGCAGTCTTGCGGCCCAAAGG GTCACCCTGGCGCCCCGGCGCTTCGCCACGGCCGATGATCTGGCGGCTTTCCATGCGGCCTTGACCCACGAAGATCTTCT GAGGACGATTTTGGCGAATGATCTGATCGAATGGCTGCGGGCGACATTTTCGCCCGAAACCGGCGGCTTGAGGGCGCATC TCGCCCGGGTTCTGGGCCAATGA
Upstream 100 bases:
>100_bases GGGGCACCGGTAGGCTGTTTTTTTTTTGATAAGAGCGACACGCGAACCCTCCAAACACAGGCTTCTGTTTTATACTGCGG CGGGCGTGTAAGAAACCGTG
Downstream 100 bases:
>100_bases GCGTTCTGGCGGTGATTTATCTGCTGATGGCCGAACTGTCGGATCTGGTCGCGGCGATCGTGCTGGCCACCACCGAGTGG GAGGGCATCGGCGCGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MRTVLGEDHETMRERTRRQGESFADFLAHLAAVFGPQALCVRHELYFLIVTPTGFRPGWRQALRALGALARDAGLLWLRI APPPPPPTAAVFLVATLPGANGWEVLKSGLPALPAKTPACAVLHPRLWPRLGPSLGLWWGRPPRWDGVDATSLPYPPLSA LWQAARLALPALSCRDGAISRVAVAATLARHGLWRAAWRRLARSRRGVLVLHNDFDMMSAACLGLGPPTVCLQHGVPTDE FFPARADVQVVWGPSSRAAYAEGGVERERLVVDALGRGEGAIAASGPPAGFALISQGHTPLYGPGLGAKLLDLARDLAPL LPDGLDLLLHPAEDPGSPAYAGVKGLRVSVPPHGLLRRGQTGRSWLVAGFSSTALIDAAVAGHYVVGLDWPLPGSLAAQR VTLAPRRFATADDLAAFHAALTHEDLLRTILANDLIEWLRATFSPETGGLRAHLARVLGQ
Sequences:
>Translated_460_residues MRTVLGEDHETMRERTRRQGESFADFLAHLAAVFGPQALCVRHELYFLIVTPTGFRPGWRQALRALGALARDAGLLWLRI APPPPPPTAAVFLVATLPGANGWEVLKSGLPALPAKTPACAVLHPRLWPRLGPSLGLWWGRPPRWDGVDATSLPYPPLSA LWQAARLALPALSCRDGAISRVAVAATLARHGLWRAAWRRLARSRRGVLVLHNDFDMMSAACLGLGPPTVCLQHGVPTDE FFPARADVQVVWGPSSRAAYAEGGVERERLVVDALGRGEGAIAASGPPAGFALISQGHTPLYGPGLGAKLLDLARDLAPL LPDGLDLLLHPAEDPGSPAYAGVKGLRVSVPPHGLLRRGQTGRSWLVAGFSSTALIDAAVAGHYVVGLDWPLPGSLAAQR VTLAPRRFATADDLAAFHAALTHEDLLRTILANDLIEWLRATFSPETGGLRAHLARVLGQ >Mature_460_residues MRTVLGEDHETMRERTRRQGESFADFLAHLAAVFGPQALCVRHELYFLIVTPTGFRPGWRQALRALGALARDAGLLWLRI APPPPPPTAAVFLVATLPGANGWEVLKSGLPALPAKTPACAVLHPRLWPRLGPSLGLWWGRPPRWDGVDATSLPYPPLSA LWQAARLALPALSCRDGAISRVAVAATLARHGLWRAAWRRLARSRRGVLVLHNDFDMMSAACLGLGPPTVCLQHGVPTDE FFPARADVQVVWGPSSRAAYAEGGVERERLVVDALGRGEGAIAASGPPAGFALISQGHTPLYGPGLGAKLLDLARDLAPL LPDGLDLLLHPAEDPGSPAYAGVKGLRVSVPPHGLLRRGQTGRSWLVAGFSSTALIDAAVAGHYVVGLDWPLPGSLAAQR VTLAPRRFATADDLAAFHAALTHEDLLRTILANDLIEWLRATFSPETGGLRAHLARVLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49134; Mature: 49134
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVLGEDHETMRERTRRQGESFADFLAHLAAVFGPQALCVRHELYFLIVTPTGFRPGWR CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEEEEEECCCCCCHHHH QALRALGALARDAGLLWLRIAPPPPPPTAAVFLVATLPGANGWEVLKSGLPALPAKTPAC HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCE AVLHPRLWPRLGPSLGLWWGRPPRWDGVDATSLPYPPLSALWQAARLALPALSCRDGAIS EEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH RVAVAATLARHGLWRAAWRRLARSRRGVLVLHNDFDMMSAACLGLGPPTVCLQHGVPTDE HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHCCCCCCC FFPARADVQVVWGPSSRAAYAEGGVERERLVVDALGRGEGAIAASGPPAGFALISQGHTP CCCCCCCEEEEECCCCCCCHHCCCCCHHHHHEECCCCCCCCEECCCCCCCEEEEECCCCC LYGPGLGAKLLDLARDLAPLLPDGLDLLLHPAEDPGSPAYAGVKGLRVSVPPHGLLRRGQ CCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHCCCCCEEECCCHHHHHCCC TGRSWLVAGFSSTALIDAAVAGHYVVGLDWPLPGSLAAQRVTLAPRRFATADDLAAFHAA CCCEEEEECCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHEEECCHHHCCHHHHHHHHHH LTHEDLLRTILANDLIEWLRATFSPETGGLRAHLARVLGQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MRTVLGEDHETMRERTRRQGESFADFLAHLAAVFGPQALCVRHELYFLIVTPTGFRPGWR CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEEEEEECCCCCCHHHH QALRALGALARDAGLLWLRIAPPPPPPTAAVFLVATLPGANGWEVLKSGLPALPAKTPAC HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCE AVLHPRLWPRLGPSLGLWWGRPPRWDGVDATSLPYPPLSALWQAARLALPALSCRDGAIS EEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH RVAVAATLARHGLWRAAWRRLARSRRGVLVLHNDFDMMSAACLGLGPPTVCLQHGVPTDE HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHCCCCCCC FFPARADVQVVWGPSSRAAYAEGGVERERLVVDALGRGEGAIAASGPPAGFALISQGHTP CCCCCCCEEEEECCCCCCCHHCCCCCHHHHHEECCCCCCCCEECCCCCCCEEEEECCCCC LYGPGLGAKLLDLARDLAPLLPDGLDLLLHPAEDPGSPAYAGVKGLRVSVPPHGLLRRGQ CCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHCCCCCEEECCCHHHHHCCC TGRSWLVAGFSSTALIDAAVAGHYVVGLDWPLPGSLAAQRVTLAPRRFATADDLAAFHAA CCCEEEEECCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHEEECCHHHCCHHHHHHHHHH LTHEDLLRTILANDLIEWLRATFSPETGGLRAHLARVLGQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA