| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is wecB [H]
Identifier: 83592829
GI number: 83592829
Start: 1763172
End: 1764326
Strand: Reverse
Name: wecB [H]
Synonym: Rru_A1493
Alternate gene names: 83592829
Gene position: 1764326-1763172 (Counterclockwise)
Preceding gene: 83592834
Following gene: 83592828
Centisome position: 40.53
GC content: 68.74
Gene sequence:
>1155_bases GTGTCGCTCTTATCAAAAAAAAAACAGCCTACCGGTGCCCCCCTTCTGGTCGTCATCGGAACACGACCCGAAGCCATCAA ACTCGCCCCCGTGGTTCTGGCCCTGCGCCGGAACGCCCGGGTGCCGGTCAAGGTCTGCCTCAGCGGTCAGCACCGTGACC TGCTGACCCAGGGGCTCTCGGCCTTCGATCTGACCATCGACCATAGCCTGGACCTGATGACCCCCGATCAGCGCCCAAGC GATCTGGTGGCGCGGGTCATCACCGGCCTGACCCCGGTCATCGAAGCCACCGCTCCGGCTTGGCTGGTGGTTCAGGGCGA CACGACAACGGCGCTGGGCGCCGCCCTGGCCGGCTTCCACGCCCGGCTCGACGTCGCCCATGTCGAAGCCGGCCTGCGCA GCGGCGATCGCGCCGCCCCCTGGCCCGAGGAGATGAACCGCCGGCTGATCGGCCAGATCGCGGCGCTGCATTTCGCCCCG ACCGAGCGCGCCCGGGCCAATCTTCTGGCCGAAGGCGTGGCCGAGGGCGCTATCGAGGTCACCGGCAACACGGTGATCGA CGCCCTGCATCTGGCCCTGGCCCGCATCAAGGACACCCCCCGGGTCATCGAGGCCGCCGCGCCGATCCTGGCCACGGCGG GCGAACGCGCCCTGGTCCTGGTCACCATCCACCGCCGCGAAAGCCTGGGCGAGGCCTTGCCGCGCTTGGCCGAGGCGCTT CTTGGGCTGGCCAAGGCCGAGGAGCGGTTGATCGTTCTGCCCATTCATCCCAATCCGCGCCTCGCCCCGCTGATCGAGGC GCTGAGCGGTCATCCCGGCATCTTGCTGACCCCGGCGCTTGATTATCTGCCCTTCGTCGCCCTGCTCCATCGCGCCGATC TGATCCTGACCGATTCCGGGGGCATCCAGGAAGAGGCCTCGGCGCTTGGCAAACCGGTTCTGGTGCTGCGCGACACCACC GAGCGCCCCGAACTGGTCGCCGGCGGCAACGGCTTGGTGGTCGGCACCCGGACCGCCCGGATTCTCGACCATGCCCTGCC GCTGCTGACCGACCCGGCCGCCCGCGCCGCTTTGGCCCAAACCCATGACGGTTTCGGCGATGGCCATGCCGCCGAGCGCA TCGCCCAAACCCTCGAAAATCGGATTGCCCCATGA
Upstream 100 bases:
>100_bases TCCCGCATCGTTTCGTGGTCTTCCCCTAAAACTGTCCGCATCACGGTTTCTTACACGCCCGCCGCAGTATAAAACAGAAG CCTGTGTTTGGAGGGTTCGC
Downstream 100 bases:
>100_bases CGCTCAGCGCCAATGACCTGATTTTCCGCGCCCTGCTCGCCCTTGTCGTTCTAGCGCCCTTGCCTTTGGGGGCCAATCGG CCGGCGGCCTGGAGCGCGCT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSLLSKKKQPTGAPLLVVIGTRPEAIKLAPVVLALRRNARVPVKVCLSGQHRDLLTQGLSAFDLTIDHSLDLMTPDQRPS DLVARVITGLTPVIEATAPAWLVVQGDTTTALGAALAGFHARLDVAHVEAGLRSGDRAAPWPEEMNRRLIGQIAALHFAP TERARANLLAEGVAEGAIEVTGNTVIDALHLALARIKDTPRVIEAAAPILATAGERALVLVTIHRRESLGEALPRLAEAL LGLAKAEERLIVLPIHPNPRLAPLIEALSGHPGILLTPALDYLPFVALLHRADLILTDSGGIQEEASALGKPVLVLRDTT ERPELVAGGNGLVVGTRTARILDHALPLLTDPAARAALAQTHDGFGDGHAAERIAQTLENRIAP
Sequences:
>Translated_384_residues MSLLSKKKQPTGAPLLVVIGTRPEAIKLAPVVLALRRNARVPVKVCLSGQHRDLLTQGLSAFDLTIDHSLDLMTPDQRPS DLVARVITGLTPVIEATAPAWLVVQGDTTTALGAALAGFHARLDVAHVEAGLRSGDRAAPWPEEMNRRLIGQIAALHFAP TERARANLLAEGVAEGAIEVTGNTVIDALHLALARIKDTPRVIEAAAPILATAGERALVLVTIHRRESLGEALPRLAEAL LGLAKAEERLIVLPIHPNPRLAPLIEALSGHPGILLTPALDYLPFVALLHRADLILTDSGGIQEEASALGKPVLVLRDTT ERPELVAGGNGLVVGTRTARILDHALPLLTDPAARAALAQTHDGFGDGHAAERIAQTLENRIAP >Mature_383_residues SLLSKKKQPTGAPLLVVIGTRPEAIKLAPVVLALRRNARVPVKVCLSGQHRDLLTQGLSAFDLTIDHSLDLMTPDQRPSD LVARVITGLTPVIEATAPAWLVVQGDTTTALGAALAGFHARLDVAHVEAGLRSGDRAAPWPEEMNRRLIGQIAALHFAPT ERARANLLAEGVAEGAIEVTGNTVIDALHLALARIKDTPRVIEAAAPILATAGERALVLVTIHRRESLGEALPRLAEALL GLAKAEERLIVLPIHPNPRLAPLIEALSGHPGILLTPALDYLPFVALLHRADLILTDSGGIQEEASALGKPVLVLRDTTE RPELVAGGNGLVVGTRTARILDHALPLLTDPAARAALAQTHDGFGDGHAAERIAQTLENRIAP
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=369, Percent_Identity=45.2574525745258, Blast_Score=305, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 40586; Mature: 40454
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSKKKQPTGAPLLVVIGTRPEAIKLAPVVLALRRNARVPVKVCLSGQHRDLLTQGLS CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCC AFDLTIDHSLDLMTPDQRPSDLVARVITGLTPVIEATAPAWLVVQGDTTTALGAALAGFH CEEEEEECCEECCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHH ARLDVAHVEAGLRSGDRAAPWPEEMNRRLIGQIAALHFAPTERARANLLAEGVAEGAIEV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEE TGNTVIDALHLALARIKDTPRVIEAAAPILATAGERALVLVTIHRRESLGEALPRLAEAL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHH LGLAKAEERLIVLPIHPNPRLAPLIEALSGHPGILLTPALDYLPFVALLHRADLILTDSG HHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCEEEECCC GIQEEASALGKPVLVLRDTTERPELVAGGNGLVVGTRTARILDHALPLLTDPAARAALAQ CCHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHH THDGFGDGHAAERIAQTLENRIAP CCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SLLSKKKQPTGAPLLVVIGTRPEAIKLAPVVLALRRNARVPVKVCLSGQHRDLLTQGLS CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCC AFDLTIDHSLDLMTPDQRPSDLVARVITGLTPVIEATAPAWLVVQGDTTTALGAALAGFH CEEEEEECCEECCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHH ARLDVAHVEAGLRSGDRAAPWPEEMNRRLIGQIAALHFAPTERARANLLAEGVAEGAIEV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEE TGNTVIDALHLALARIKDTPRVIEAAAPILATAGERALVLVTIHRRESLGEALPRLAEAL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHH LGLAKAEERLIVLPIHPNPRLAPLIEALSGHPGILLTPALDYLPFVALLHRADLILTDSG HHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCEEEECCC GIQEEASALGKPVLVLRDTTERPELVAGGNGLVVGTRTARILDHALPLLTDPAARAALAQ CCHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHH THDGFGDGHAAERIAQTLENRIAP CCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]