Click here to switch to the map view.

The map label for this gene is 83592790

Identifier: 83592790

GI number: 83592790

Start: 1717957

End: 1718493

Strand: Reverse

Name: 83592790

Synonym: Rru_A1454

Alternate gene names: NA

Gene position: 1718493-1717957 (Counterclockwise)

Preceding gene: 83592791

Following gene: 83592789

Centisome position: 39.48

GC content: 64.25

Gene sequence:

>537_bases
ATGGTCGATGCCTACTTGGGGGAAATCCGCCTGTTTGCCGGCAATTGGGTACCCCAGCAATTTGTCGCCTGCGATGGATC
CCTCTTGCCGATCAAGCAGAACGAGGCGCTTTTCGCCGTGCTGGGCACGGTGTTTGGCGGCGATAGCGTCGCCACCTTCG
GCGTTCCCGATCTGCGTGGCCGGGTGCCCCTGCACAAGGGCCAGGGGACCGGATTGACCCCGCGGGTTCTGGGGCAGGCG
GTGGGGACCGAGACGGTGACGGTGGCCGCCGCCGAAATGCCCGCCCATAACCACACCCTGTTCGCTTGTTCCGATCCGGC
AACCGCGAACAGCCCGATCAACGCCCTGCCCGCGACCGCCCCGGCGGGCTATACCCAGTTCGTCACCAATCAACCAGGGC
AGACTCTGACCAAGCTGCAATTGGCCGAAGCCGCGATCTCCACCGAGGGAGGCGGCCTCGCCCACGCCAATGTCATGCCC
TCCCTGGCCCTGACTTTCATCTTGTGTTCCCAGGGAATTTTCCCCGTCAAGCAGTGA

Upstream 100 bases:

>100_bases
CCAATAGTCAGCCGTCCCTGGTGCTGAATTACTGCATCGCGCTGCGCGGCATTTACCCTACCCGCGGTTAAGCCACCCCT
CATAGCCTAAGGAGACGACC

Downstream 100 bases:

>100_bases
CAAAGCACAAGGACCTTGGCAGATGGCTGATTCGTTTATCGGGGAAATCCGCATCTTCGGCTTCAACTATGCCCCCGTCG
ATTGGGCCTTTTGCGCGGGG

Product: phage tail Collar

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Microcystin Dependent; Phenylacrylic Acid Decarboxylase; Cell Wall/Surface Repeat Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MVDAYLGEIRLFAGNWVPQQFVACDGSLLPIKQNEALFAVLGTVFGGDSVATFGVPDLRGRVPLHKGQGTGLTPRVLGQA
VGTETVTVAAAEMPAHNHTLFACSDPATANSPINALPATAPAGYTQFVTNQPGQTLTKLQLAEAAISTEGGGLAHANVMP
SLALTFILCSQGIFPVKQ

Sequences:

>Translated_178_residues
MVDAYLGEIRLFAGNWVPQQFVACDGSLLPIKQNEALFAVLGTVFGGDSVATFGVPDLRGRVPLHKGQGTGLTPRVLGQA
VGTETVTVAAAEMPAHNHTLFACSDPATANSPINALPATAPAGYTQFVTNQPGQTLTKLQLAEAAISTEGGGLAHANVMP
SLALTFILCSQGIFPVKQ
>Mature_178_residues
MVDAYLGEIRLFAGNWVPQQFVACDGSLLPIKQNEALFAVLGTVFGGDSVATFGVPDLRGRVPLHKGQGTGLTPRVLGQA
VGTETVTVAAAEMPAHNHTLFACSDPATANSPINALPATAPAGYTQFVTNQPGQTLTKLQLAEAAISTEGGGLAHANVMP
SLALTFILCSQGIFPVKQ

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18398; Mature: 18398

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDAYLGEIRLFAGNWVPQQFVACDGSLLPIKQNEALFAVLGTVFGGDSVATFGVPDLRG
CCCCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCHHEEEEHHHHCCCCEEEECCCCCCC
RVPLHKGQGTGLTPRVLGQAVGTETVTVAAAEMPAHNHTLFACSDPATANSPINALPATA
CCCEECCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
PAGYTQFVTNQPGQTLTKLQLAEAAISTEGGGLAHANVMPSLALTFILCSQGIFPVKQ
CCCCEEHCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVDAYLGEIRLFAGNWVPQQFVACDGSLLPIKQNEALFAVLGTVFGGDSVATFGVPDLRG
CCCCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCHHEEEEHHHHCCCCEEEECCCCCCC
RVPLHKGQGTGLTPRVLGQAVGTETVTVAAAEMPAHNHTLFACSDPATANSPINALPATA
CCCEECCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
PAGYTQFVTNQPGQTLTKLQLAEAAISTEGGGLAHANVMPSLALTFILCSQGIFPVKQ
CCCCEEHCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA