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The map label for this gene is cooC

Identifier: 83592764

GI number: 83592764

Start: 1688216

End: 1689007

Strand: Direct

Name: cooC

Synonym: Rru_A1428

Alternate gene names: 83592764

Gene position: 1688216-1689007 (Clockwise)

Preceding gene: 83592763

Following gene: 83592765

Centisome position: 38.78

GC content: 63.89

Gene sequence:

>792_bases
ATGAAGATCGCGGTGACGGGAAAGGGCGGGGTTGGCAAGTCGACCATCGTTGGCATGCTGGCCCGCGCCTTGTCCGACGA
GGGGTGGAGGGTGATGGCCATCGATGCCGATCCCGATGCCAATCTGGCCTCGGCCATCGGCGTTCCGGCCGAGCGTTTAA
GCGCGCTTCTGCCGATTTCGAAGATGACCGGTCTGGCGCGCGAGCGCACCGGGGCGAGCGAGACGACGGGCACCCATTTC
ATCTTGAACCCCCGGGTCGATGATATCCCCGAGCAGTTCTGTGTCGACCATGCCGGGATCAAGCTGCTGCTGATGGGAAC
GGTTAACCACGCCGGGTCGGGCTGCGTTTGCCCCGAACACGCCCTGGTCCGCACCCTGCTGCGTCACATCCTGACCAAGC
GCAAGGAATGCGTGCTGATCGATATGGAAGCCGGAATCGAGCACTTCGGCCGTGGCACGATCGAAGCCGTCGATTTGCTG
GTGATCGTCATCGAGCCGGGCAGCCGCAGCCTGCAGACCGCCGCCCAGATCGAAGGTCTGGCCCGCGATCTGGGGATCAA
GACGATCTGCCACATCGCCAACAAGCTGGCCTCGCCCGTCGATGTCGGCTTCATCCTTGATCGCGCCGACCAATTCGACC
TTTTGGGCTCGATCCCCTTTGACAGCGCCATCCAGGCCGCCGATCAGGCCGGCCTGTCATGCTACGATCTTAGCCCGGCC
TGCCGCGACAAGGCCCACGCCCTGATGGCGGCCTTGCTGGAGCGCGTCGGCCCAACCCAAGGCGTTTCATAA

Upstream 100 bases:

>100_bases
ATTCAAGAGCGTCGCGCCGGGCTTGGCCTGTAAGACCTTAACGACCCCGGGGCGGGGAAGTTGATCCTCGCCCCCTCTCT
TTCTTATCGGTGAGGGTGCC

Downstream 100 bases:

>100_bases
TGTGCATGGCGAAAGTGGTGCTGACCAAGGCCGATGGCGGCCGCGTCGAAATCGGCGATGTTCTTGAGGTTCGCGCCGAG
GGCGGAGCGGTGAGGGTGAC

Product: cobyrinic acid a,c-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKIAVTGKGGVGKSTIVGMLARALSDEGWRVMAIDADPDANLASAIGVPAERLSALLPISKMTGLARERTGASETTGTHF
ILNPRVDDIPEQFCVDHAGIKLLLMGTVNHAGSGCVCPEHALVRTLLRHILTKRKECVLIDMEAGIEHFGRGTIEAVDLL
VIVIEPGSRSLQTAAQIEGLARDLGIKTICHIANKLASPVDVGFILDRADQFDLLGSIPFDSAIQAADQAGLSCYDLSPA
CRDKAHALMAALLERVGPTQGVS

Sequences:

>Translated_263_residues
MKIAVTGKGGVGKSTIVGMLARALSDEGWRVMAIDADPDANLASAIGVPAERLSALLPISKMTGLARERTGASETTGTHF
ILNPRVDDIPEQFCVDHAGIKLLLMGTVNHAGSGCVCPEHALVRTLLRHILTKRKECVLIDMEAGIEHFGRGTIEAVDLL
VIVIEPGSRSLQTAAQIEGLARDLGIKTICHIANKLASPVDVGFILDRADQFDLLGSIPFDSAIQAADQAGLSCYDLSPA
CRDKAHALMAALLERVGPTQGVS
>Mature_263_residues
MKIAVTGKGGVGKSTIVGMLARALSDEGWRVMAIDADPDANLASAIGVPAERLSALLPISKMTGLARERTGASETTGTHF
ILNPRVDDIPEQFCVDHAGIKLLLMGTVNHAGSGCVCPEHALVRTLLRHILTKRKECVLIDMEAGIEHFGRGTIEAVDLL
VIVIEPGSRSLQTAAQIEGLARDLGIKTICHIANKLASPVDVGFILDRADQFDLLGSIPFDSAIQAADQAGLSCYDLSPA
CRDKAHALMAALLERVGPTQGVS

Specific function: Involved in the insertion of nickel into the carbon monoxide dehydrogenase (CODH)

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COOC_RHORU (P31897)

Other databases:

- EMBL:   U65510
- PIR:   D42957
- PIR:   T51322
- ProteinModelPortal:   P31897
- InterPro:   IPR002586
- InterPro:   IPR014433
- PIRSF:   PIRSF005647

Pfam domain/function: PF01656 CbiA

EC number: NA

Molecular weight: Translated: 27763; Mature: 27763

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVTGKGGVGKSTIVGMLARALSDEGWRVMAIDADPDANLASAIGVPAERLSALLPIS
CEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCHHHHHHHCCHH
KMTGLARERTGASETTGTHFILNPRVDDIPEQFCVDHAGIKLLLMGTVNHAGSGCVCPEH
HHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCH
ALVRTLLRHILTKRKECVLIDMEAGIEHFGRGTIEAVDLLVIVIEPGSRSLQTAAQIEGL
HHHHHHHHHHHHCCCCEEEEEHHHCHHHHCCCHHEEEEEEEEEECCCCCHHHHHHHHHHH
ARDLGIKTICHIANKLASPVDVGFILDRADQFDLLGSIPFDSAIQAADQAGLSCYDLSPA
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCEEEECCHH
CRDKAHALMAALLERVGPTQGVS
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKIAVTGKGGVGKSTIVGMLARALSDEGWRVMAIDADPDANLASAIGVPAERLSALLPIS
CEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCHHHHHHHCCHH
KMTGLARERTGASETTGTHFILNPRVDDIPEQFCVDHAGIKLLLMGTVNHAGSGCVCPEH
HHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCH
ALVRTLLRHILTKRKECVLIDMEAGIEHFGRGTIEAVDLLVIVIEPGSRSLQTAAQIEGL
HHHHHHHHHHHHCCCCEEEEEHHHCHHHHCCCHHEEEEEEEEEECCCCCHHHHHHHHHHH
ARDLGIKTICHIANKLASPVDVGFILDRADQFDLLGSIPFDSAIQAADQAGLSCYDLSPA
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCEEEECCHH
CRDKAHALMAALLERVGPTQGVS
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9079911; 1644755