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The map label for this gene is trg [C]

Identifier: 83592740

GI number: 83592740

Start: 1657814

End: 1659649

Strand: Direct

Name: trg [C]

Synonym: Rru_A1404

Alternate gene names: 83592740

Gene position: 1657814-1659649 (Clockwise)

Preceding gene: 83592739

Following gene: 83592741

Centisome position: 38.09

GC content: 60.51

Gene sequence:

>1836_bases
ATGCGTGTCACAATCAAAATCAAGTTGGCCTTGACCTTCGCGGTCATCGTCCTTCTTTCCATGGCGACGGCTGGGCTTGG
CATACAAAAGATGGGCGCCCTTAATGAATCGTTTGTCGCGATGGTTGATGGGCCGGTGCGGCAAATCCAGAGGGCCCAAG
AGCTCTTTAGCGACTTGTTGACTGTGTCACGCTCGGAGAAAAGTTTGCTCGTCGCCGACACCCCAGAGCTTATTGCCATG
TACGAACAACGGATCATCAAAGAACAGAAAGTTCTGGATGGTCATCGTTTGAAGCTTGAAGAAAACGCTACCGATGTTAA
TCGGCAGAACGTCGATATTTTCTCCGATCTTTGGCGAGAATATGCTGCTGTGCAGGGTAAAATCATCGCCCTTGCCAAAG
ATGACAGAGCGGGTGAAGCCGCCACTCTGTCGCGTGGTCAGGGGCGACAGATCCTTGAACGCGTTGACGCCACGCTTGTC
GATCTGATCGCCGATGAGCAGAAGTCCATGGATCAAACCCAGGCTGACGCCCTCCGTCAATACGAAAGCGCCCGGCTGTT
ATTGCTTGGGGTCATCGCCGCCTCTCTTCTGATCGCCGTGGTGGCGGCGACTTGGATTTCGCTCAGCATCAGTCGTGGCC
TGCGCAGCGCCATTGGTCTGGCCGAAGCCGTCAGCATCGGCGATCTCGATCAAACGGTCAGCGCCAAGACCAATGATGAG
ATCAAGGATATGGTCGATTCCCTCAACAAGATGACGGCGAACCTGCGGGAAACCGCCGCAGTCGCCGACGCGGTGGCCGG
CGGCGATTTGACGGTCGAAGCCAAGCCCCTGTCGGACAAGGATACCTTGGGAATGGCGCTCAAGCGCATGGTTGAAAAGC
TGCGCGAGGTGGTCGGCGAGGCCAATAGCGCCGCCGAGAACGTGTCGTCGGGCAGTCAGGAATTGTCGGCGACCGCCGAG
GAATTGTCGCAGGGCGCCACCGAACAGGCGTCCTCGGCCGAAGAGGCCTCGGCCTCGATGGAGGAGATGGCGGCCAATAT
CAAGCAGAACGCCGATAACGCCAGCCAGACCGAGAAGATCGCCCGCCAATCCTCGCTCGATGCCCAGGCCAGCGGTGAGG
CGGTGACCCGCGCCGTTTCGGCGATGCGGACGATCGCCGAGAAGATCACCATCGTTCAAGAGATCGCCCGCCAGACCGAT
CTGCTGGCGCTCAACGCCGCCGTCGAGGCCGCAAGGGCCGGCGAGCATGGGCGCGGCTTCGCCGTCGTCGCTTCGGAAGT
GCGCAAGCTGGCCGAACGCAGCCAGACGGCGGCGGCCGAGATCAGCACCATGTCGTCGCAAACCGTGCGCGCCGCCCAGG
AGGCCGGGGATATGCTCGGCCGTCTGGTCCCCGATATCAGAAAAACCGCCGAACTGGTTTCCGAGATCAGCGCCGCCTGT
CGCGAGCAGGATATCGGCGGTGACCAGATCAATCAGGCGATCCAGCAGCTTGACAAGGTGACCCAGCAGAACGCCAGCGC
GTCGGAGGAAATGTCGGCGACCTCGGAGGAACTGGCCGCCCAGTCCGAACAGCTTCAAGCCAGCATCCCCTATTTCCGAC
TTGATGGCGCAGGAAGCAATTCGCGGCCAATTGCGACGCGTCCGACAACACGCCCGGCCCACGCTCCCACCACCGGGCGC
AAGCTGGCCGCCCTTTCCGCGCCTTCCCCTGCGGGAAAAACCAAGACGGCCTTGGCTCGGAAAGTGCATAGTGCTCCTAC
CGAGACCAATGGATACGCCCTTGACCTCGCTTCCGGGGCGAGCGATGCCCGCGATAGTGAATTCGAGCGTTATTGA

Upstream 100 bases:

>100_bases
GATGGCGACTTCGAGAAGTATTGAGATCGATGATGGGAAATGGCGATGGGGTTTCGCCAATCCTGTCATTCATATTTAAA
ATTCCGGGGAAGGTATCATT

Downstream 100 bases:

>100_bases
AGGGACGATGCATGACGACGACGACGGGAAATCTTGACCATCTGAGCATGCGCGATTTCCGTCGTCTGGCGACGTTCATC
CACGACTACAGCGGCATCAA

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MRVTIKIKLALTFAVIVLLSMATAGLGIQKMGALNESFVAMVDGPVRQIQRAQELFSDLLTVSRSEKSLLVADTPELIAM
YEQRIIKEQKVLDGHRLKLEENATDVNRQNVDIFSDLWREYAAVQGKIIALAKDDRAGEAATLSRGQGRQILERVDATLV
DLIADEQKSMDQTQADALRQYESARLLLLGVIAASLLIAVVAATWISLSISRGLRSAIGLAEAVSIGDLDQTVSAKTNDE
IKDMVDSLNKMTANLRETAAVADAVAGGDLTVEAKPLSDKDTLGMALKRMVEKLREVVGEANSAAENVSSGSQELSATAE
ELSQGATEQASSAEEASASMEEMAANIKQNADNASQTEKIARQSSLDAQASGEAVTRAVSAMRTIAEKITIVQEIARQTD
LLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQTAAAEISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAAC
REQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELAAQSEQLQASIPYFRLDGAGSNSRPIATRPTTRPAHAPTTGR
KLAALSAPSPAGKTKTALARKVHSAPTETNGYALDLASGASDARDSEFERY

Sequences:

>Translated_611_residues
MRVTIKIKLALTFAVIVLLSMATAGLGIQKMGALNESFVAMVDGPVRQIQRAQELFSDLLTVSRSEKSLLVADTPELIAM
YEQRIIKEQKVLDGHRLKLEENATDVNRQNVDIFSDLWREYAAVQGKIIALAKDDRAGEAATLSRGQGRQILERVDATLV
DLIADEQKSMDQTQADALRQYESARLLLLGVIAASLLIAVVAATWISLSISRGLRSAIGLAEAVSIGDLDQTVSAKTNDE
IKDMVDSLNKMTANLRETAAVADAVAGGDLTVEAKPLSDKDTLGMALKRMVEKLREVVGEANSAAENVSSGSQELSATAE
ELSQGATEQASSAEEASASMEEMAANIKQNADNASQTEKIARQSSLDAQASGEAVTRAVSAMRTIAEKITIVQEIARQTD
LLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQTAAAEISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAAC
REQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELAAQSEQLQASIPYFRLDGAGSNSRPIATRPTTRPAHAPTTGR
KLAALSAPSPAGKTKTALARKVHSAPTETNGYALDLASGASDARDSEFERY
>Mature_611_residues
MRVTIKIKLALTFAVIVLLSMATAGLGIQKMGALNESFVAMVDGPVRQIQRAQELFSDLLTVSRSEKSLLVADTPELIAM
YEQRIIKEQKVLDGHRLKLEENATDVNRQNVDIFSDLWREYAAVQGKIIALAKDDRAGEAATLSRGQGRQILERVDATLV
DLIADEQKSMDQTQADALRQYESARLLLLGVIAASLLIAVVAATWISLSISRGLRSAIGLAEAVSIGDLDQTVSAKTNDE
IKDMVDSLNKMTANLRETAAVADAVAGGDLTVEAKPLSDKDTLGMALKRMVEKLREVVGEANSAAENVSSGSQELSATAE
ELSQGATEQASSAEEASASMEEMAANIKQNADNASQTEKIARQSSLDAQASGEAVTRAVSAMRTIAEKITIVQEIARQTD
LLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQTAAAEISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAAC
REQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELAAQSEQLQASIPYFRLDGAGSNSRPIATRPTTRPAHAPTTGR
KLAALSAPSPAGKTKTALARKVHSAPTETNGYALDLASGASDARDSEFERY

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=305, Percent_Identity=40.327868852459, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI2367378, Length=370, Percent_Identity=33.7837837837838, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1788195, Length=328, Percent_Identity=36.890243902439, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1788194, Length=292, Percent_Identity=37.3287671232877, Blast_Score=170, Evalue=3e-43,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=34.3065693430657, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 65003; Mature: 65003

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTIKIKLALTFAVIVLLSMATAGLGIQKMGALNESFVAMVDGPVRQIQRAQELFSDLL
CEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
TVSRSEKSLLVADTPELIAMYEQRIIKEQKVLDGHRLKLEENATDVNRQNVDIFSDLWRE
HHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHH
YAAVQGKIIALAKDDRAGEAATLSRGQGRQILERVDATLVDLIADEQKSMDQTQADALRQ
HHHHCCEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YESARLLLLGVIAASLLIAVVAATWISLSISRGLRSAIGLAEAVSIGDLDQTVSAKTNDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHH
IKDMVDSLNKMTANLRETAAVADAVAGGDLTVEAKPLSDKDTLGMALKRMVEKLREVVGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
ANSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEEMAANIKQNADNASQTEKI
CHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ARQSSLDAQASGEAVTRAVSAMRTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGF
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVASEVRKLAERSQTAAAEISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELAAQSEQLQASIPYFRLDGAGSN
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
SRPIATRPTTRPAHAPTTGRKLAALSAPSPAGKTKTALARKVHSAPTETNGYALDLASGA
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
SDARDSEFERY
CCCCCCCCCCC
>Mature Secondary Structure
MRVTIKIKLALTFAVIVLLSMATAGLGIQKMGALNESFVAMVDGPVRQIQRAQELFSDLL
CEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
TVSRSEKSLLVADTPELIAMYEQRIIKEQKVLDGHRLKLEENATDVNRQNVDIFSDLWRE
HHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHH
YAAVQGKIIALAKDDRAGEAATLSRGQGRQILERVDATLVDLIADEQKSMDQTQADALRQ
HHHHCCEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YESARLLLLGVIAASLLIAVVAATWISLSISRGLRSAIGLAEAVSIGDLDQTVSAKTNDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHH
IKDMVDSLNKMTANLRETAAVADAVAGGDLTVEAKPLSDKDTLGMALKRMVEKLREVVGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
ANSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEEMAANIKQNADNASQTEKI
CHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ARQSSLDAQASGEAVTRAVSAMRTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGF
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVASEVRKLAERSQTAAAEISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELAAQSEQLQASIPYFRLDGAGSN
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
SRPIATRPTTRPAHAPTTGRKLAALSAPSPAGKTKTALARKVHSAPTETNGYALDLASGA
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
SDARDSEFERY
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]