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The map label for this gene is trg [C]

Identifier: 83592739

GI number: 83592739

Start: 1655824

End: 1657737

Strand: Direct

Name: trg [C]

Synonym: Rru_A1403

Alternate gene names: 83592739

Gene position: 1655824-1657737 (Clockwise)

Preceding gene: 83592738

Following gene: 83592740

Centisome position: 38.04

GC content: 64.73

Gene sequence:

>1914_bases
ATGATGCGACTGTCGATCCCGCTGAAACTGGCATTCACCTTCGCCATCATCGTTATCCTGGCCATGGCGACGGCTGGACT
GGGCATTCAGAAGCTGGGGGCCCTCAACGGCTCGCTTGTCGCCATGGTCGAAGGGCCGGTCCAAAGGATCCAACTCGCCC
AGGAGCTTTATAGCGAGTTGGTGACGGTGTCGCGTTCCGAGAAAGCGCTGCTGCTGGCCGGTCCGGACACGCAGGGCCAA
TACGAGACGCGGATCGCCAAGGAACAACAAGGGGTGGAGACGCGACGCGACCAACTCGCCGCCCTGGCCACCGAGGAGAG
CGCAAACGCGATCAGCGCCTTCACGCCCCTTTGGCAGCAGTACGCCACCTTGCAGTCCCAGATCATCGCCTTGGCCAAAA
GCGGCCGCATGGAGGAGGCAATAGCCCTGTCGCGGGTCGATGCCCGGGCGGTGCTCGACCGCGCCGATACTACCCTTACC
GCCCTGATCGAGAGCGAACGGGCGGCCATGACCCGCACCGAAGCCCAAGCCGCCAGCCAATATGCCGAGGCGAGGCTTCT
TCTGATCGGGTTGATCCTGGTTTCGGTCTTGATCGCCGTCGTGGCGGCGACCTGGATCTCGCTTAGCATCAGTCGGGGCC
TGCGCGGGACCATTCGGTTGGCCGAAGCGGTCAGTATTGGCGACCTTGATCAGACGGTCAGCGTCAAGACCAACGATGAG
ATCAAGGATATGGTCGATGCCCTCAACACCATGACCGCCACCTTGCGGGCGACGGCCAAAATCGCCGATACGGTTGCCGA
TGGCGATCTTTCGGTCGAGTCCAAGCCGCTGTCGGACAAGGACGCCTTGGGGATCGCCCTGCGGCGGATGATCAGCAGTC
TGCGGGCGACGGCCGAGGTTGCCGACGCCATCGCCGATGGCACGCTGACGGTCGAGGCCAAGCCCCAGTCAGAGAACGAT
ACCCTGGGGTTGGCGCTCAAGCGCATGGTTGAAAAGCTGCGCGAGGTGGTCGGCGAGGCGACCTCGGCCGCCGAGAATGT
GTCCTCGGGCAGTCAGGAATTGTCGGCGACGGCCGAGGAATTGTCGCAGGGCGCCACCGAACAGGCGTCGTCGGCCGAAG
AGGCCTCGGCCTCGATGGAGCAGATGGCGGCCAATATCAAGCAGAACGCCGATAACGCCAGCCAGACCGAGAAGATCGCC
CGCCAATCCTCGCTTGATGCCCAGGCCAGCGGCGAGGCGGTGACCCGCGCCGTGGTGGCGATGCAGACGATCGCCGAGAA
GATTACCATCGTTCAGGAGATCGCCCGCCAGACCGATCTGCTGGCGCTCAATGCCGCCGTCGAGGCGGCAAGGGCCGGCG
AGCATGGGCGCGGTTTCGCCGTCGTCGCTTCGGAAGTGCGCAAGCTGGCCGAACGCAGCCAGATGGCGGCGTCCGAGATC
AGCACCATGTCGTCGCAAACCGTGCGCGCCGCCCAGGAGGCCGGAGAAATGTTGGGCCGACTGGTGCCCGATATCAGAAA
AACCGCCGAACTGGTTTCCGAGATCAGCGCCGCCTGCCGCGAGCAGGATATCGGCGGCGATCAGATCAATCAGGCGATCC
AGCAGCTTGACAAGGTGACCCAGCAGAACGCCAGCGCCTCCGAGCAGATGTCGGCGACCTCGGAGGAACTGGCCGCCCAG
TCCGAACAGCTTCAAGCCAGCATCGCCTATTTCCGCGTCGATGAGGGAAGCGGGGCCCGGCGGTCCACGCCGTCGGCCAA
ACCGCCAACCATCGGGCGCGTCGCGCGGTCGCTTGGCAAAGCGGGTGCGGCGCGGGGTGGTCCCGGGCGCAAAGCGGGCA
TGACGACCGGCTTTTCCCTTGATCTCGGTCACGGCGCCGGCGACGCCCAGGATGGCGACTTCGAGAAGTATTGA

Upstream 100 bases:

>100_bases
GCTTCTCGCCCCCTCTCTCCTAACCCAGGCCAGTACGGCCGCCGAGCCGGCCGATCTTTCCCCCGGTTCCGTTTAGGAAC
GCTGAAGGCCAAGGATTTTC

Downstream 100 bases:

>100_bases
GATCGATGATGGGAAATGGCGATGGGGTTTCGCCAATCCTGTCATTCATATTTAAAATTCCGGGGAAGGTATCATTATGC
GTGTCACAATCAAAATCAAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MMRLSIPLKLAFTFAIIVILAMATAGLGIQKLGALNGSLVAMVEGPVQRIQLAQELYSELVTVSRSEKALLLAGPDTQGQ
YETRIAKEQQGVETRRDQLAALATEESANAISAFTPLWQQYATLQSQIIALAKSGRMEEAIALSRVDARAVLDRADTTLT
ALIESERAAMTRTEAQAASQYAEARLLLIGLILVSVLIAVVAATWISLSISRGLRGTIRLAEAVSIGDLDQTVSVKTNDE
IKDMVDALNTMTATLRATAKIADTVADGDLSVESKPLSDKDALGIALRRMISSLRATAEVADAIADGTLTVEAKPQSEND
TLGLALKRMVEKLREVVGEATSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEQMAANIKQNADNASQTEKIA
RQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQMAASEI
STMSSQTVRAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEQMSATSEELAAQ
SEQLQASIAYFRVDEGSGARRSTPSAKPPTIGRVARSLGKAGAARGGPGRKAGMTTGFSLDLGHGAGDAQDGDFEKY

Sequences:

>Translated_637_residues
MMRLSIPLKLAFTFAIIVILAMATAGLGIQKLGALNGSLVAMVEGPVQRIQLAQELYSELVTVSRSEKALLLAGPDTQGQ
YETRIAKEQQGVETRRDQLAALATEESANAISAFTPLWQQYATLQSQIIALAKSGRMEEAIALSRVDARAVLDRADTTLT
ALIESERAAMTRTEAQAASQYAEARLLLIGLILVSVLIAVVAATWISLSISRGLRGTIRLAEAVSIGDLDQTVSVKTNDE
IKDMVDALNTMTATLRATAKIADTVADGDLSVESKPLSDKDALGIALRRMISSLRATAEVADAIADGTLTVEAKPQSEND
TLGLALKRMVEKLREVVGEATSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEQMAANIKQNADNASQTEKIA
RQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQMAASEI
STMSSQTVRAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEQMSATSEELAAQ
SEQLQASIAYFRVDEGSGARRSTPSAKPPTIGRVARSLGKAGAARGGPGRKAGMTTGFSLDLGHGAGDAQDGDFEKY
>Mature_637_residues
MMRLSIPLKLAFTFAIIVILAMATAGLGIQKLGALNGSLVAMVEGPVQRIQLAQELYSELVTVSRSEKALLLAGPDTQGQ
YETRIAKEQQGVETRRDQLAALATEESANAISAFTPLWQQYATLQSQIIALAKSGRMEEAIALSRVDARAVLDRADTTLT
ALIESERAAMTRTEAQAASQYAEARLLLIGLILVSVLIAVVAATWISLSISRGLRGTIRLAEAVSIGDLDQTVSVKTNDE
IKDMVDALNTMTATLRATAKIADTVADGDLSVESKPLSDKDALGIALRRMISSLRATAEVADAIADGTLTVEAKPQSEND
TLGLALKRMVEKLREVVGEATSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEQMAANIKQNADNASQTEKIA
RQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQMAASEI
STMSSQTVRAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEQMSATSEELAAQ
SEQLQASIAYFRVDEGSGARRSTPSAKPPTIGRVARSLGKAGAARGGPGRKAGMTTGFSLDLGHGAGDAQDGDFEKY

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=327, Percent_Identity=39.4495412844037, Blast_Score=189, Evalue=5e-49,
Organism=Escherichia coli, GI1788194, Length=299, Percent_Identity=38.4615384615385, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI2367378, Length=312, Percent_Identity=38.4615384615385, Blast_Score=169, Evalue=6e-43,
Organism=Escherichia coli, GI1788195, Length=327, Percent_Identity=36.697247706422, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1789453, Length=277, Percent_Identity=33.9350180505415, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67073; Mature: 67073

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRLSIPLKLAFTFAIIVILAMATAGLGIQKLGALNGSLVAMVEGPVQRIQLAQELYSEL
CCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH
VTVSRSEKALLLAGPDTQGQYETRIAKEQQGVETRRDQLAALATEESANAISAFTPLWQQ
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YATLQSQIIALAKSGRMEEAIALSRVDARAVLDRADTTLTALIESERAAMTRTEAQAASQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAEARLLLIGLILVSVLIAVVAATWISLSISRGLRGTIRLAEAVSIGDLDQTVSVKTNDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHH
IKDMVDALNTMTATLRATAKIADTVADGDLSVESKPLSDKDALGIALRRMISSLRATAEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ADAIADGTLTVEAKPQSENDTLGLALKRMVEKLREVVGEATSAAENVSSGSQELSATAEE
HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSQGATEQASSAEEASASMEQMAANIKQNADNASQTEKIARQSSLDAQASGEAVTRAVVA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQMAASEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
STMSSQTVRAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QQNASASEQMSATSEELAAQSEQLQASIAYFRVDEGSGARRSTPSAKPPTIGRVARSLGK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
AGAARGGPGRKAGMTTGFSLDLGHGAGDAQDGDFEKY
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMRLSIPLKLAFTFAIIVILAMATAGLGIQKLGALNGSLVAMVEGPVQRIQLAQELYSEL
CCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH
VTVSRSEKALLLAGPDTQGQYETRIAKEQQGVETRRDQLAALATEESANAISAFTPLWQQ
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YATLQSQIIALAKSGRMEEAIALSRVDARAVLDRADTTLTALIESERAAMTRTEAQAASQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAEARLLLIGLILVSVLIAVVAATWISLSISRGLRGTIRLAEAVSIGDLDQTVSVKTNDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHH
IKDMVDALNTMTATLRATAKIADTVADGDLSVESKPLSDKDALGIALRRMISSLRATAEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ADAIADGTLTVEAKPQSENDTLGLALKRMVEKLREVVGEATSAAENVSSGSQELSATAEE
HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSQGATEQASSAEEASASMEQMAANIKQNADNASQTEKIARQSSLDAQASGEAVTRAVVA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQMAASEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
STMSSQTVRAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QQNASASEQMSATSEELAAQSEQLQASIAYFRVDEGSGARRSTPSAKPPTIGRVARSLGK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
AGAARGGPGRKAGMTTGFSLDLGHGAGDAQDGDFEKY
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]