| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592708
Identifier: 83592708
GI number: 83592708
Start: 1615127
End: 1615981
Strand: Reverse
Name: 83592708
Synonym: Rru_A1372
Alternate gene names: NA
Gene position: 1615981-1615127 (Counterclockwise)
Preceding gene: 83592709
Following gene: 83592707
Centisome position: 37.12
GC content: 69.47
Gene sequence:
>855_bases ATGTTGACCCTTGGCTGCCCCCTGCGCTTCCCCACCCTGCCCGGGCTTGTCGTTTATCAGGACGACGAAGACCCCAAGCG CTTCCATGTGCTGGCCACCACGATCGGGCTGGCCAAGCGCGCCGATGGCGGTCCGGCCTTTTCGGTGGTCTCGGCCAGCA GGAACGGCCCGGCCTTTATCAGCCTGACCGCCGAACTGGGCGCCACCCCGGCGCAAGAGGCTGCAGTGCGCGCCCTTTTG GCCGATGGCGAAGTCGCCGCCCTTCGTCTGCGGCCGACCGACCCGACGGGGTCATGGTCGGAAATCGCCGTGCCGGCCCA GCCGGTGAGCGACGCCGTGCTGGTCCCTCCGCTGTTCTCGGCCGGCGAGGCGCGGCTGGTGCTGGGCGACGGGGCGGAGC TTTTGGCCGATATCGTCCAGGCACCGTCGTTGTTTGGCGCCAATACCGCGAGTTTCTCGCTGATTTTGGAAAAGGGCACG GCGCAGCTGGCCGATCTTGTCGAGGGCGACGGGCCGATCGGCACCATACGCTATGACATCAGCTTTCCGGCCCGCGTTCC CGCCCTGACGCTTGCCGTGAAGGCCCATGGCGAAGGCCCGCAGGAGGGCGAAACCGTTGAGGCCGCCGTGCTGCGCGGCG CCCTGGAGGTGACCGCCTTCGATGCCGAGGGCGAGCGGCCGGCGCTGGTCACCACCGCCGCCGTTCTTGATGTCGCGGCC GAGCTGTGGCGGCGCAGACCGCCGGGAACGCGCAGCCTGCGCGTGGACCCAGGCGCGATCATCCCCTGCCATCTGACCGT CATCGCCCCCTTGCGCGCCCTGGTTCCCGCCGCCCTGTGGGAGGGATTGGGATGA
Upstream 100 bases:
>100_bases GCGTTACGCCACCGAGAAGTCCGAGCCGCAGCTTTACGGCCAGCGCAATCGCATGGCCGAAACGGTGCTGGCCGGCTTCA CCGACAGCCGGTGAGGACCG
Downstream 100 bases:
>100_bases GCCCGGGCGATTTCTTCCAGGCCCTGCGCGCCCTGGGCGAGGCCCATGCCGGCCTTTTCGGCGGTGTGACCCCAACCGGC CCGGCGCTTTCGGCCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLTLGCPLRFPTLPGLVVYQDDEDPKRFHVLATTIGLAKRADGGPAFSVVSASRNGPAFISLTAELGATPAQEAAVRALL ADGEVAALRLRPTDPTGSWSEIAVPAQPVSDAVLVPPLFSAGEARLVLGDGAELLADIVQAPSLFGANTASFSLILEKGT AQLADLVEGDGPIGTIRYDISFPARVPALTLAVKAHGEGPQEGETVEAAVLRGALEVTAFDAEGERPALVTTAAVLDVAA ELWRRRPPGTRSLRVDPGAIIPCHLTVIAPLRALVPAALWEGLG
Sequences:
>Translated_284_residues MLTLGCPLRFPTLPGLVVYQDDEDPKRFHVLATTIGLAKRADGGPAFSVVSASRNGPAFISLTAELGATPAQEAAVRALL ADGEVAALRLRPTDPTGSWSEIAVPAQPVSDAVLVPPLFSAGEARLVLGDGAELLADIVQAPSLFGANTASFSLILEKGT AQLADLVEGDGPIGTIRYDISFPARVPALTLAVKAHGEGPQEGETVEAAVLRGALEVTAFDAEGERPALVTTAAVLDVAA ELWRRRPPGTRSLRVDPGAIIPCHLTVIAPLRALVPAALWEGLG >Mature_284_residues MLTLGCPLRFPTLPGLVVYQDDEDPKRFHVLATTIGLAKRADGGPAFSVVSASRNGPAFISLTAELGATPAQEAAVRALL ADGEVAALRLRPTDPTGSWSEIAVPAQPVSDAVLVPPLFSAGEARLVLGDGAELLADIVQAPSLFGANTASFSLILEKGT AQLADLVEGDGPIGTIRYDISFPARVPALTLAVKAHGEGPQEGETVEAAVLRGALEVTAFDAEGERPALVTTAAVLDVAA ELWRRRPPGTRSLRVDPGAIIPCHLTVIAPLRALVPAALWEGLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29391; Mature: 29391
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLGCPLRFPTLPGLVVYQDDEDPKRFHVLATTIGLAKRADGGPAFSVVSASRNGPAFI CEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHCCCCCCEEEEEECCCCCCEEE SLTAELGATPAQEAAVRALLADGEVAALRLRPTDPTGSWSEIAVPAQPVSDAVLVPPLFS EEEHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEECCCCCC AGEARLVLGDGAELLADIVQAPSLFGANTASFSLILEKGTAQLADLVEGDGPIGTIRYDI CCCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEEEE SFPARVPALTLAVKAHGEGPQEGETVEAAVLRGALEVTAFDAEGERPALVTTAAVLDVAA ECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCEEEHHHHHHHHHH ELWRRRPPGTRSLRVDPGAIIPCHLTVIAPLRALVPAALWEGLG HHHHCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTLGCPLRFPTLPGLVVYQDDEDPKRFHVLATTIGLAKRADGGPAFSVVSASRNGPAFI CEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHCCCCCCEEEEEECCCCCCEEE SLTAELGATPAQEAAVRALLADGEVAALRLRPTDPTGSWSEIAVPAQPVSDAVLVPPLFS EEEHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEECCCCCC AGEARLVLGDGAELLADIVQAPSLFGANTASFSLILEKGTAQLADLVEGDGPIGTIRYDI CCCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEEEE SFPARVPALTLAVKAHGEGPQEGETVEAAVLRGALEVTAFDAEGERPALVTTAAVLDVAA ECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCEEEHHHHHHHHHH ELWRRRPPGTRSLRVDPGAIIPCHLTVIAPLRALVPAALWEGLG HHHHCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA