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The map label for this gene is alsB [C]

Identifier: 83592701

GI number: 83592701

Start: 1606498

End: 1607436

Strand: Reverse

Name: alsB [C]

Synonym: Rru_A1365

Alternate gene names: 83592701

Gene position: 1607436-1606498 (Counterclockwise)

Preceding gene: 83592702

Following gene: 83592700

Centisome position: 36.93

GC content: 62.3

Gene sequence:

>939_bases
ATGAAGACCGTTTTCGTTTCCGTGGTCGCCGCGATGGCGATTTCATCTCTTCCCATGGTCGCCTCGGCCCAGGAGAAGAG
CACCGACCCCCTTCGGTTCGTTCTCGTTCCCAAGGTCGTTCATCCCTGGTTCGACAAGGTCAATGACGGCGCCAAGGCGG
CGGCCGAAATGCTGACCACCACCACCGGCCGCAAGGTCACCGTGGAATATCGCGCCCCGCAGAAGGCCGATGTGGTCGAA
CAAAACGACATCATCGCCCGCTCGATCGCCACCCGCCCCGACGGCATTTTCGTCGATCTTCTTGACGAGAAGGGCAACCG
CGCGGTGCTCGAGGAGGCCCAGGAACAGGGCATTCCGGTGACGGTGTTTGATTCGGTCGCGCCCGAGGGCATGAACCTGA
CCAGCATCGGCAATGATTTCTGCGAGCAGGCGACCATCGCCTCGACCCGTCTGGTCGAACTGATGGGCGGCAAGGGCGAA
GTGGCGATCATGATGGGCGTGCCCACCGCCCCCAATCACGCCATCCGCGCCAAATGTCACGAGCAGACCTTCGCCAAATA
TCCCGACATCAAGCTGGTCGCCACCGGCATCGACAATGACAGCATCGAGACCGCGCAGAAGCAGGCCGCGGCCATCATGC
AGGCCCACCCCAACCTCAAGGGCTGGGTCGCCTCCGACGCCGCCGGTCCGATCGGCATCGGTCAGGCGATCAAGGAAGCC
GGCAAGGTTGGCAAGGTCTTCGAGGTCGGCCTCGACGACCTGCCCGATCTGCTGGCCCTGATCAAGGAAGGCGTGGTTGA
TTCCTCGTCGTCCACCAAGCCCGAAATGCAGGGCTATTGGGCGGTGATCGCCACCTGGCAAAAGGCGATGGGCATGCCGA
CGCCGAAGTACATCGACACCGGCATCGCCGTCATCACCAAGGAAAGTCTCGCCAAGTAA

Upstream 100 bases:

>100_bases
CGACACACTCACCCTTTCCGAACGTGGTTTCGGCCGCGTCGCATGACCTCCGTTGGGCGGAGGCCAGCGCCGGCGCCGTA
ATCGTGGAGGAAAATGTCCC

Downstream 100 bases:

>100_bases
GCTTGCGGACCTCCGCCCCCGGGGTCGCCTTGTCCAAACAGGCAAGGCGGCACCCGGCCGGCCGAGGACGACGGCCCAAG
ACTTTCCCTGAGCGCGGGCA

Product: ribose ABC transporter periplasmic binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Ribose ABC Transporter; Monosaccharide-Transporting ATPase; ABC-Type Sugar Transport System Periplasmic Component; HTH-Type Transcriptional Repressor PurR; Twin-Arginine Translocation Pathway Signal; RbsB Protein; D-Ribose ABC Transporter Permease Protein; Abc Transporter Integral Membrane Subunit; ABC-Type Sugar Transport System

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKTVFVSVVAAMAISSLPMVASAQEKSTDPLRFVLVPKVVHPWFDKVNDGAKAAAEMLTTTTGRKVTVEYRAPQKADVVE
QNDIIARSIATRPDGIFVDLLDEKGNRAVLEEAQEQGIPVTVFDSVAPEGMNLTSIGNDFCEQATIASTRLVELMGGKGE
VAIMMGVPTAPNHAIRAKCHEQTFAKYPDIKLVATGIDNDSIETAQKQAAAIMQAHPNLKGWVASDAAGPIGIGQAIKEA
GKVGKVFEVGLDDLPDLLALIKEGVVDSSSSTKPEMQGYWAVIATWQKAMGMPTPKYIDTGIAVITKESLAK

Sequences:

>Translated_312_residues
MKTVFVSVVAAMAISSLPMVASAQEKSTDPLRFVLVPKVVHPWFDKVNDGAKAAAEMLTTTTGRKVTVEYRAPQKADVVE
QNDIIARSIATRPDGIFVDLLDEKGNRAVLEEAQEQGIPVTVFDSVAPEGMNLTSIGNDFCEQATIASTRLVELMGGKGE
VAIMMGVPTAPNHAIRAKCHEQTFAKYPDIKLVATGIDNDSIETAQKQAAAIMQAHPNLKGWVASDAAGPIGIGQAIKEA
GKVGKVFEVGLDDLPDLLALIKEGVVDSSSSTKPEMQGYWAVIATWQKAMGMPTPKYIDTGIAVITKESLAK
>Mature_312_residues
MKTVFVSVVAAMAISSLPMVASAQEKSTDPLRFVLVPKVVHPWFDKVNDGAKAAAEMLTTTTGRKVTVEYRAPQKADVVE
QNDIIARSIATRPDGIFVDLLDEKGNRAVLEEAQEQGIPVTVFDSVAPEGMNLTSIGNDFCEQATIASTRLVELMGGKGE
VAIMMGVPTAPNHAIRAKCHEQTFAKYPDIKLVATGIDNDSIETAQKQAAAIMQAHPNLKGWVASDAAGPIGIGQAIKEA
GKVGKVFEVGLDDLPDLLALIKEGVVDSSSSTKPEMQGYWAVIATWQKAMGMPTPKYIDTGIAVITKESLAK

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33261; Mature: 33261

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVFVSVVAAMAISSLPMVASAQEKSTDPLRFVLVPKVVHPWFDKVNDGAKAAAEMLTT
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHC
TTGRKVTVEYRAPQKADVVEQNDIIARSIATRPDGIFVDLLDEKGNRAVLEEAQEQGIPV
CCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCE
TVFDSVAPEGMNLTSIGNDFCEQATIASTRLVELMGGKGEVAIMMGVPTAPNHAIRAKCH
EEECCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
EQTFAKYPDIKLVATGIDNDSIETAQKQAAAIMQAHPNLKGWVASDAAGPIGIGQAIKEA
HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHH
GKVGKVFEVGLDDLPDLLALIKEGVVDSSSSTKPEMQGYWAVIATWQKAMGMPTPKYIDT
CCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHC
GIAVITKESLAK
CHHEEEHHHHCC
>Mature Secondary Structure
MKTVFVSVVAAMAISSLPMVASAQEKSTDPLRFVLVPKVVHPWFDKVNDGAKAAAEMLTT
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHC
TTGRKVTVEYRAPQKADVVEQNDIIARSIATRPDGIFVDLLDEKGNRAVLEEAQEQGIPV
CCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCE
TVFDSVAPEGMNLTSIGNDFCEQATIASTRLVELMGGKGEVAIMMGVPTAPNHAIRAKCH
EEECCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
EQTFAKYPDIKLVATGIDNDSIETAQKQAAAIMQAHPNLKGWVASDAAGPIGIGQAIKEA
HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHH
GKVGKVFEVGLDDLPDLLALIKEGVVDSSSSTKPEMQGYWAVIATWQKAMGMPTPKYIDT
CCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHC
GIAVITKESLAK
CHHEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA