Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is ycgS [C]

Identifier: 83592696

GI number: 83592696

Start: 1601121

End: 1601768

Strand: Reverse

Name: ycgS [C]

Synonym: Rru_A1360

Alternate gene names: 83592696

Gene position: 1601768-1601121 (Counterclockwise)

Preceding gene: 83592697

Following gene: 83592695

Centisome position: 36.8

GC content: 71.45

Gene sequence:

>648_bases
ATGCATGACACCTTGTCCGCCAGCGATCTGCGCCAGATGTTCCTGGGGGTCTGCGACACCATGCTCGCCAATATCGACCG
CCTGACCAAGGCCGATCAGCTGATCGGCGACGGCGATCACGGCATCGGCATGCGCCGGGGCTTCACCGCCGTGCGCGCCT
ATCTCGAGACCGCCACGGAAGAGACCGTCGGCGCCGTCTTCAAGGGCGTTGGCACCGCCTTGATGTCGCATACCGGCGGC
GCGGCGGGGGCGATCTTCGGCACGCTGTTTCGCGCCGGCGCCACCCTTGATACCCCGACCCTGACCGGAGAAGGCTACGC
GCGCTTCCTGGAAGACGCCCTGGCGGCGGTGCAAAAGCGCGGCGGCTGCACCACCGGCGGCAAGACCCTGATCGACGCCC
TGGCGCCCGCCGCCCTCGCCGCCCGCGCTGGCGTTAGCGCCGGCGCTCCCTTGCCCGAGGTCCTGGCCGCCGCGGCGGAA
GCCGCCGAACAGGGCATGGAGGCGACCAAGGCGATGATCGCCACCACCGGCAAGGCCCGCACCCTGGGCGAGCGCTCGCT
CGGCCATCCCGATCCCGGCGCCATCTCGCTCGCCATCGTGCTGGCGGCGATGAGTTCCCACGTTCCCGCGCCCGCCGGCG
CGGCGTGA

Upstream 100 bases:

>100_bases
CCGGCTTCTCGATCACGATGATGCGTCTTGACGAGGAATTGAAGCGCTTCATCGACGCTCCCGCCCGCTCCGCCGCCTAT
ACGAGATAGGGAGATCTCCC

Downstream 100 bases:

>100_bases
CCCGATCATAGGAGATCCCTATCATGGCGGAAACCGCCAAGCCTAAAATCGTCGTCGGCGCCGATCACCTGGGGCGGGAG
CTCAAGGATCTGCTGCGCGA

Product: Dak phosphatase

Products: ADP; glycerone phosphate

Alternate protein names: ORFC [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATEETVGAVFKGVGTALMSHTGG
AAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKRGGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAE
AAEQGMEATKAMIATTGKARTLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA

Sequences:

>Translated_215_residues
MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATEETVGAVFKGVGTALMSHTGG
AAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKRGGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAE
AAEQGMEATKAMIATTGKARTLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA
>Mature_215_residues
MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATEETVGAVFKGVGTALMSHTGG
AAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKRGGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAE
AAEQGMEATKAMIATTGKARTLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA

Specific function: Unknown

COG id: COG2376

COG function: function code G; Dihydroxyacetone kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DhaL domain [H]

Homologues:

Organism=Homo sapiens, GI20149621, Length=180, Percent_Identity=31.6666666666667, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1787449, Length=194, Percent_Identity=36.0824742268041, Blast_Score=107, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17565018, Length=195, Percent_Identity=28.7179487179487, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004007
- InterPro:   IPR012737 [H]

Pfam domain/function: PF02734 Dak2 [H]

EC number: 2.7.1.29

Molecular weight: Translated: 21548; Mature: 21548

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ETVGAVFKGVGTALMSHTGGAAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAEAAEQGMEATKAMIATTGKAR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ETVGAVFKGVGTALMSHTGGAAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAEAAEQGMEATKAMIATTGKAR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; glycerone

Specific reaction: ATP + glycerone = ADP + glycerone phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7703858 [H]