| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ycgS [C]
Identifier: 83592696
GI number: 83592696
Start: 1601121
End: 1601768
Strand: Reverse
Name: ycgS [C]
Synonym: Rru_A1360
Alternate gene names: 83592696
Gene position: 1601768-1601121 (Counterclockwise)
Preceding gene: 83592697
Following gene: 83592695
Centisome position: 36.8
GC content: 71.45
Gene sequence:
>648_bases ATGCATGACACCTTGTCCGCCAGCGATCTGCGCCAGATGTTCCTGGGGGTCTGCGACACCATGCTCGCCAATATCGACCG CCTGACCAAGGCCGATCAGCTGATCGGCGACGGCGATCACGGCATCGGCATGCGCCGGGGCTTCACCGCCGTGCGCGCCT ATCTCGAGACCGCCACGGAAGAGACCGTCGGCGCCGTCTTCAAGGGCGTTGGCACCGCCTTGATGTCGCATACCGGCGGC GCGGCGGGGGCGATCTTCGGCACGCTGTTTCGCGCCGGCGCCACCCTTGATACCCCGACCCTGACCGGAGAAGGCTACGC GCGCTTCCTGGAAGACGCCCTGGCGGCGGTGCAAAAGCGCGGCGGCTGCACCACCGGCGGCAAGACCCTGATCGACGCCC TGGCGCCCGCCGCCCTCGCCGCCCGCGCTGGCGTTAGCGCCGGCGCTCCCTTGCCCGAGGTCCTGGCCGCCGCGGCGGAA GCCGCCGAACAGGGCATGGAGGCGACCAAGGCGATGATCGCCACCACCGGCAAGGCCCGCACCCTGGGCGAGCGCTCGCT CGGCCATCCCGATCCCGGCGCCATCTCGCTCGCCATCGTGCTGGCGGCGATGAGTTCCCACGTTCCCGCGCCCGCCGGCG CGGCGTGA
Upstream 100 bases:
>100_bases CCGGCTTCTCGATCACGATGATGCGTCTTGACGAGGAATTGAAGCGCTTCATCGACGCTCCCGCCCGCTCCGCCGCCTAT ACGAGATAGGGAGATCTCCC
Downstream 100 bases:
>100_bases CCCGATCATAGGAGATCCCTATCATGGCGGAAACCGCCAAGCCTAAAATCGTCGTCGGCGCCGATCACCTGGGGCGGGAG CTCAAGGATCTGCTGCGCGA
Product: Dak phosphatase
Products: ADP; glycerone phosphate
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATEETVGAVFKGVGTALMSHTGG AAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKRGGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAE AAEQGMEATKAMIATTGKARTLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA
Sequences:
>Translated_215_residues MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATEETVGAVFKGVGTALMSHTGG AAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKRGGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAE AAEQGMEATKAMIATTGKARTLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA >Mature_215_residues MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATEETVGAVFKGVGTALMSHTGG AAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKRGGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAE AAEQGMEATKAMIATTGKARTLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA
Specific function: Unknown
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
Organism=Homo sapiens, GI20149621, Length=180, Percent_Identity=31.6666666666667, Blast_Score=72, Evalue=3e-13, Organism=Escherichia coli, GI1787449, Length=194, Percent_Identity=36.0824742268041, Blast_Score=107, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17565018, Length=195, Percent_Identity=28.7179487179487, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR012737 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: 2.7.1.29
Molecular weight: Translated: 21548; Mature: 21548
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ETVGAVFKGVGTALMSHTGGAAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAEAAEQGMEATKAMIATTGKAR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHDTLSASDLRQMFLGVCDTMLANIDRLTKADQLIGDGDHGIGMRRGFTAVRAYLETATE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ETVGAVFKGVGTALMSHTGGAAGAIFGTLFRAGATLDTPTLTGEGYARFLEDALAAVQKR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GGCTTGGKTLIDALAPAALAARAGVSAGAPLPEVLAAAAEAAEQGMEATKAMIATTGKAR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TLGERSLGHPDPGAISLAIVLAAMSSHVPAPAGAA HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7703858 [H]