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The map label for this gene is yecS [H]

Identifier: 83592633

GI number: 83592633

Start: 1530813

End: 1531496

Strand: Direct

Name: yecS [H]

Synonym: Rru_A1297

Alternate gene names: 83592633

Gene position: 1530813-1531496 (Clockwise)

Preceding gene: 83592632

Following gene: 83592634

Centisome position: 35.17

GC content: 62.72

Gene sequence:

>684_bases
ATGATGGAGAATTCCTCGCTGCTGGTCCATTACGGACCGTCGATCCTGCGCGGCTTTGGCGTGACCGTGCTGTGCTGGTC
GGCGGGCTGCGCCCTGGGCATCGTTTTCGGCTTCGCCCTGGCCTTGCTGCGCCGCTTGCCCTTCGCCCCCTTGCGCTGGG
TGGTGCGCGCCTATATCGAAGTCATCCGCGGTACGCCCTTCCTGATCCAGCTTTTCCTGCTCTATTCCGGCGGCCCGTTC
ATCGGCCTGCGGCTGGAGGCGACGACGGCGGGCATTCTGGGCCTGGGGATCTATGGCAGCGCCTATTTCGCCGAGATCTT
CCGCGGCGGCTTCGAGGCCGTGCCCAAGGGCTATGTGGAAGCCGGCGAAAGCCTGTCGATGTCGCCCTTGGTGATCTTGC
GCCGCATCGTCGTGCCGACCATGCTGGTGGCGATCTTGCCGGCCATCGTCAATATGATGATCATCCTGACCAAGGAAACG
GTGGTGCTGTCGATCATCACCGTGCCCGAACTGATGTATGAGATGCAGACCATGGCGGCGGAAACCTTCGCCGTCTTCGA
AGTCATTTTTGGTCTCGCCCTGTTCTATTGGCTGCTTGTCGAGGTGGTGTCGCGCCTTGGCCGCCGGGTCGAGGCCCGTC
TTACCCGTTTCCTGACCGATAACAAGCCGGGGGTCCGCGCCTGA

Upstream 100 bases:

>100_bases
AGATCTATATGGCCGCCGGCGTGATCTATTTTCTTATCAATGGCTGTCTGGCCATTCTGGGCGCCCTGGTCGAGCGCCAC
CTGCGGCTTCAGGGGCGGGG

Downstream 100 bases:

>100_bases
TGCCTACCCAGTCCGCCCCTTCGCCGCTGATCACCATGGACAACGTCAGCAAGTCCTTTGGCGCCTTGCAGGTGCTCAAG
GGAATCACCTTGGCGGTCAA

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MMENSSLLVHYGPSILRGFGVTVLCWSAGCALGIVFGFALALLRRLPFAPLRWVVRAYIEVIRGTPFLIQLFLLYSGGPF
IGLRLEATTAGILGLGIYGSAYFAEIFRGGFEAVPKGYVEAGESLSMSPLVILRRIVVPTMLVAILPAIVNMMIILTKET
VVLSIITVPELMYEMQTMAAETFAVFEVIFGLALFYWLLVEVVSRLGRRVEARLTRFLTDNKPGVRA

Sequences:

>Translated_227_residues
MMENSSLLVHYGPSILRGFGVTVLCWSAGCALGIVFGFALALLRRLPFAPLRWVVRAYIEVIRGTPFLIQLFLLYSGGPF
IGLRLEATTAGILGLGIYGSAYFAEIFRGGFEAVPKGYVEAGESLSMSPLVILRRIVVPTMLVAILPAIVNMMIILTKET
VVLSIITVPELMYEMQTMAAETFAVFEVIFGLALFYWLLVEVVSRLGRRVEARLTRFLTDNKPGVRA
>Mature_227_residues
MMENSSLLVHYGPSILRGFGVTVLCWSAGCALGIVFGFALALLRRLPFAPLRWVVRAYIEVIRGTPFLIQLFLLYSGGPF
IGLRLEATTAGILGLGIYGSAYFAEIFRGGFEAVPKGYVEAGESLSMSPLVILRRIVVPTMLVAILPAIVNMMIILTKET
VVLSIITVPELMYEMQTMAAETFAVFEVIFGLALFYWLLVEVVSRLGRRVEARLTRFLTDNKPGVRA

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=35.6481481481481, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=33.1707317073171, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787087, Length=216, Percent_Identity=27.3148148148148, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=29.7560975609756, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788645, Length=178, Percent_Identity=31.4606741573034, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788646, Length=144, Percent_Identity=30.5555555555556, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=23.9234449760766, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787086, Length=223, Percent_Identity=26.0089686098655, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25028; Mature: 25028

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMENSSLLVHYGPSILRGFGVTVLCWSAGCALGIVFGFALALLRRLPFAPLRWVVRAYIE
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VIRGTPFLIQLFLLYSGGPFIGLRLEATTAGILGLGIYGSAYFAEIFRGGFEAVPKGYVE
HHCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
AGESLSMSPLVILRRIVVPTMLVAILPAIVNMMIILTKETVVLSIITVPELMYEMQTMAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETFAVFEVIFGLALFYWLLVEVVSRLGRRVEARLTRFLTDNKPGVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMENSSLLVHYGPSILRGFGVTVLCWSAGCALGIVFGFALALLRRLPFAPLRWVVRAYIE
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VIRGTPFLIQLFLLYSGGPFIGLRLEATTAGILGLGIYGSAYFAEIFRGGFEAVPKGYVE
HHCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
AGESLSMSPLVILRRIVVPTMLVAILPAIVNMMIILTKETVVLSIITVPELMYEMQTMAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETFAVFEVIFGLALFYWLLVEVVSRLGRRVEARLTRFLTDNKPGVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]