| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592584
Identifier: 83592584
GI number: 83592584
Start: 1469564
End: 1469854
Strand: Reverse
Name: 83592584
Synonym: Rru_A1248
Alternate gene names: NA
Gene position: 1469854-1469564 (Counterclockwise)
Preceding gene: 83592585
Following gene: 83592583
Centisome position: 33.77
GC content: 66.67
Gene sequence:
>291_bases ATGTCCGTCCCCGCCCGTCGCGTTCCGTCCGCCCGCCCCGTCGCCGAACAGATCACCGAAGAGTTCCTGCTGGCCGATCT GATGGAGCGCAAGCCCTCGGTCTTGGCGCCGGGCAAAACCGTGTTCACCCAAAGCTTCCTCTGTCCCGCCTGCGGCACCG CCCATGCGGTTCCGCGCAATGCCACCTATAATTTCCTGGCCATGTCCGGCGCCTGTTCCAATTCCGCCTGCGACGCCCGC TGGACGATCACCGCCCCCACCATCAAGGTGACCGCCACCCCACGCGCCTGA
Upstream 100 bases:
>100_bases ATTTCGATGATTACGATCGGTTTTTTCCGAGTGAACTTCGATCTTCCTGTGCCCAGATTGATCATATCAAAGCCGCGTTC CTTTCCTGGGAGATCCCGTC
Downstream 100 bases:
>100_bases ACCGCCGTCAAAAGACTTGATCTCCGACAGGCCCGGATCGCCACCCAGCGTCCGGGCCTGTCGGCTTTCAAGGTCTTTGC GAAAACCCGGGAAAGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSVPARRVPSARPVAEQITEEFLLADLMERKPSVLAPGKTVFTQSFLCPACGTAHAVPRNATYNFLAMSGACSNSACDAR WTITAPTIKVTATPRA
Sequences:
>Translated_96_residues MSVPARRVPSARPVAEQITEEFLLADLMERKPSVLAPGKTVFTQSFLCPACGTAHAVPRNATYNFLAMSGACSNSACDAR WTITAPTIKVTATPRA >Mature_95_residues SVPARRVPSARPVAEQITEEFLLADLMERKPSVLAPGKTVFTQSFLCPACGTAHAVPRNATYNFLAMSGACSNSACDARW TITAPTIKVTATPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10238; Mature: 10107
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPARRVPSARPVAEQITEEFLLADLMERKPSVLAPGKTVFTQSFLCPACGTAHAVPRN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC ATYNFLAMSGACSNSACDARWTITAPTIKVTATPRA CCEEEEEECCCCCCCCCCCEEEEECCEEEEEECCCC >Mature Secondary Structure SVPARRVPSARPVAEQITEEFLLADLMERKPSVLAPGKTVFTQSFLCPACGTAHAVPRN CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC ATYNFLAMSGACSNSACDARWTITAPTIKVTATPRA CCEEEEEECCCCCCCCCCCEEEEECCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA