| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592583
Identifier: 83592583
GI number: 83592583
Start: 1468977
End: 1469312
Strand: Reverse
Name: 83592583
Synonym: Rru_A1247
Alternate gene names: NA
Gene position: 1469312-1468977 (Counterclockwise)
Preceding gene: 83592584
Following gene: 83592582
Centisome position: 33.76
GC content: 60.71
Gene sequence:
>336_bases ATGGCGGCCCATCCTCGAACCTATTCCCGCGCGACGCGGGAAGCGCTCGTTCTCATGGGCGGGAAGATCCGCCTTGCCCG CAAACAGCGCAAAATGTCCGAAGCCGATCTCGCCGCGCGCATCGGTATCGCCCGCAGCACCTTGCAGCTTATCGAAAAAG GAAGCCCGAAAGCGGAAATTGGTCTCGTCTTTGAGGCTGCCCATCTCGTTGGTATTCCGCTGTTCGTAGCCGAGCCCTCC ACACTCGCCGCACAGATTGCCCGAATCGAGGACCAACTCGCGCTGTTGCCTCACTCGATCCGCCGCCCCCGAACAGAGGT GAAGGATGACTTCTGA
Upstream 100 bases:
>100_bases CTGGTGCCGGCGATTTGGTGAATGTTCGCCCCGCTTGTGCTATATGACTTTTATATCAGGCGTAGAGCGCATCTGAGACC GGTATAAGAGGCATTTTCCC
Downstream 100 bases:
>100_bases ACGGCAAGCCGGCGGTTTCGATGGGGAAGCGGCCCCACGGGAAGCCTATGTTTGGCTCTGGTTACCAGGACATCACGAAC CGGTTGTCGCCGGTCGGCTT
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator-Like Protein; Xin-Antitoxin System Antitoxin Component Xre Family
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MAAHPRTYSRATREALVLMGGKIRLARKQRKMSEADLAARIGIARSTLQLIEKGSPKAEIGLVFEAAHLVGIPLFVAEPS TLAAQIARIEDQLALLPHSIRRPRTEVKDDF
Sequences:
>Translated_111_residues MAAHPRTYSRATREALVLMGGKIRLARKQRKMSEADLAARIGIARSTLQLIEKGSPKAEIGLVFEAAHLVGIPLFVAEPS TLAAQIARIEDQLALLPHSIRRPRTEVKDDF >Mature_110_residues AAHPRTYSRATREALVLMGGKIRLARKQRKMSEADLAARIGIARSTLQLIEKGSPKAEIGLVFEAAHLVGIPLFVAEPST LAAQIARIEDQLALLPHSIRRPRTEVKDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12224; Mature: 12092
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHPRTYSRATREALVLMGGKIRLARKQRKMSEADLAARIGIARSTLQLIEKGSPKAEI CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH GLVFEAAHLVGIPLFVAEPSTLAAQIARIEDQLALLPHSIRRPRTEVKDDF HHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC >Mature Secondary Structure AAHPRTYSRATREALVLMGGKIRLARKQRKMSEADLAARIGIARSTLQLIEKGSPKAEI CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH GLVFEAAHLVGIPLFVAEPSTLAAQIARIEDQLALLPHSIRRPRTEVKDDF HHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA