| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592565
Identifier: 83592565
GI number: 83592565
Start: 1450753
End: 1452069
Strand: Reverse
Name: 83592565
Synonym: Rru_A1229
Alternate gene names: NA
Gene position: 1452069-1450753 (Counterclockwise)
Preceding gene: 83592566
Following gene: 83592557
Centisome position: 33.36
GC content: 65.3
Gene sequence:
>1317_bases ATGAGAACGCTGAGGATGATCCTTTTGGCGGGCATGGCGGCAAGCGCCCTGACCGCGCCGTCCGCCGGGGCGGCCGAGGT CACGGCCCTTGATCTGGGCGCGGCGACGGCGGCGCGGCTGGCGATGGGTCACGTGCGCTTCGCCAATGGTCATGACTATA ACGCGACCGTCGGCTTTGGCAGCGGCGCCTTCCACCGGCCCGGCGACCCGCCGGGAACGCTGTATGCGGTCACCGATCGC GGTCCCAATATCGACTGCGCCGAGATCGGGGCAGTGGTCGGGATGAGCGCCGAAGCGCTGTGCGCGGGCGACACCGCCGC CAAGGTCTTCCCCTTCCCGGCCTTCACGCCGACAATCTACACCCTGTCGATCGGCGACGCGGGCGTCGAGATCGTGGACG CCCTGCCGATCAAGACCCGCTCGGGCCGGCCGATCACCGGCTTGCCCAACCCCTTGACCCTCACCGATACCGAAGGCGCC TTCGATGCCGACGGCCGGCCGCTGACACCCGATGCTAGCGGCCTTGATGTCGAGGCGGTGGCGCGGGCCGCCGATGGCTC GTTTTGGGTGGCCGAGGAATATGGCCCCTCGATCGTCCATATCGCCGACGATGGCCGGGTTCTGGTGCGCTATGTTCCCC AGGGACTGGAAAAGGATCTGGCGGCCGCCGATTACACGGTGAAAGGCACGCTGCCGGCCATCCTTGCCAAACGCAAACTC AATCGCGGCATCGAATCCCTTGGCCTGTCAGCCGATGGCCGGACCCTTTATGCCGCCTTGCAAAGCCCGCTGGTCAATCC CGACACCGCCGCCTACAAGACCTCGCGCGCCGTCCGCCTGCTCAAGATCGACGCCGCCACGGGCGAAGCCCTGAACGAAT ACGTCTATCCCGAGGACGAGGCGGCCAGCTTCACCGCCGATGCCAAGGCCGGCAAGGTCAAGCAGAGCGACGTTAAGATT TCCGAACTGGTGGTGGTCGGCCAAGACAAACTGGTGGTGCTCGAGCGCATCAGCAAAACCACCAAATTCCATCTTGTCGA GCTTGGCGCCGGGGCCTCTGATCTGTTGGGCTCGCCCTGGGACGACCCGAAGACCAGCCCCAGCCTGGAAGCCACCCCCG ATCTTGCCGCCAAAGGAGTCATTCCCCTGAGCAAGACCCTGATGCTGACGGCCGAAGGGGGGCCCTTCCCCGAAAAGATC GAAAGCATCGCCCTGCTTGACGAGTCGACCCTGGTGGTGATCAGCGACAACGACTTCGCCATCACCGGCGATCAAACCAA GGTGGTGCGCATCGCCCTGGATAAGCCGTGGAACTAG
Upstream 100 bases:
>100_bases CCAAGGCCCCTTCCGCGCCCGAAAACGTCATAGGATCATCAAAAACCCCGACCCTCGGCTTTGCTACCCTGCGCGGTCTT TTTCCACCACAGGGGGTATC
Downstream 100 bases:
>100_bases AGCAAATCCCGAGCGATCTGATCCAGATCGCGACGACGATTTGCTTCACTATCAGGTTTTTAGAGCGGCGTTCGCAAACC CAATTTCAGGCCCGCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MRTLRMILLAGMAASALTAPSAGAAEVTALDLGAATAARLAMGHVRFANGHDYNATVGFGSGAFHRPGDPPGTLYAVTDR GPNIDCAEIGAVVGMSAEALCAGDTAAKVFPFPAFTPTIYTLSIGDAGVEIVDALPIKTRSGRPITGLPNPLTLTDTEGA FDADGRPLTPDASGLDVEAVARAADGSFWVAEEYGPSIVHIADDGRVLVRYVPQGLEKDLAAADYTVKGTLPAILAKRKL NRGIESLGLSADGRTLYAALQSPLVNPDTAAYKTSRAVRLLKIDAATGEALNEYVYPEDEAASFTADAKAGKVKQSDVKI SELVVVGQDKLVVLERISKTTKFHLVELGAGASDLLGSPWDDPKTSPSLEATPDLAAKGVIPLSKTLMLTAEGGPFPEKI ESIALLDESTLVVISDNDFAITGDQTKVVRIALDKPWN
Sequences:
>Translated_438_residues MRTLRMILLAGMAASALTAPSAGAAEVTALDLGAATAARLAMGHVRFANGHDYNATVGFGSGAFHRPGDPPGTLYAVTDR GPNIDCAEIGAVVGMSAEALCAGDTAAKVFPFPAFTPTIYTLSIGDAGVEIVDALPIKTRSGRPITGLPNPLTLTDTEGA FDADGRPLTPDASGLDVEAVARAADGSFWVAEEYGPSIVHIADDGRVLVRYVPQGLEKDLAAADYTVKGTLPAILAKRKL NRGIESLGLSADGRTLYAALQSPLVNPDTAAYKTSRAVRLLKIDAATGEALNEYVYPEDEAASFTADAKAGKVKQSDVKI SELVVVGQDKLVVLERISKTTKFHLVELGAGASDLLGSPWDDPKTSPSLEATPDLAAKGVIPLSKTLMLTAEGGPFPEKI ESIALLDESTLVVISDNDFAITGDQTKVVRIALDKPWN >Mature_438_residues MRTLRMILLAGMAASALTAPSAGAAEVTALDLGAATAARLAMGHVRFANGHDYNATVGFGSGAFHRPGDPPGTLYAVTDR GPNIDCAEIGAVVGMSAEALCAGDTAAKVFPFPAFTPTIYTLSIGDAGVEIVDALPIKTRSGRPITGLPNPLTLTDTEGA FDADGRPLTPDASGLDVEAVARAADGSFWVAEEYGPSIVHIADDGRVLVRYVPQGLEKDLAAADYTVKGTLPAILAKRKL NRGIESLGLSADGRTLYAALQSPLVNPDTAAYKTSRAVRLLKIDAATGEALNEYVYPEDEAASFTADAKAGKVKQSDVKI SELVVVGQDKLVVLERISKTTKFHLVELGAGASDLLGSPWDDPKTSPSLEATPDLAAKGVIPLSKTLMLTAEGGPFPEKI ESIALLDESTLVVISDNDFAITGDQTKVVRIALDKPWN
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45665; Mature: 45665
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLRMILLAGMAASALTAPSAGAAEVTALDLGAATAARLAMGHVRFANGHDYNATVGFG CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCEEEEECCCCCEEEEECC SGAFHRPGDPPGTLYAVTDRGPNIDCAEIGAVVGMSAEALCAGDTAAKVFPFPAFTPTIY CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCEEE TLSIGDAGVEIVDALPIKTRSGRPITGLPNPLTLTDTEGAFDADGRPLTPDASGLDVEAV EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH ARAADGSFWVAEEYGPSIVHIADDGRVLVRYVPQGLEKDLAAADYTVKGTLPAILAKRKL HHHCCCCEEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHCCEEEECCHHHHHHHHHH NRGIESLGLSADGRTLYAALQSPLVNPDTAAYKTSRAVRLLKIDAATGEALNEYVYPEDE HCCHHHHCCCCCCCEEEEEHHCCCCCCCCHHHHHCCEEEEEEEECCCCHHHHHCCCCCCC AASFTADAKAGKVKQSDVKISELVVVGQDKLVVLERISKTTKFHLVELGAGASDLLGSPW CCCEECCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHCCCCEEEEEEECCCHHHHCCCCC DDPKTSPSLEATPDLAAKGVIPLSKTLMLTAEGGPFPEKIESIALLDESTLVVISDNDFA CCCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCHHHHHEEEEECCCEEEEEECCCEE ITGDQTKVVRIALDKPWN EECCCCEEEEEEECCCCC >Mature Secondary Structure MRTLRMILLAGMAASALTAPSAGAAEVTALDLGAATAARLAMGHVRFANGHDYNATVGFG CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCEEEEECCCCCEEEEECC SGAFHRPGDPPGTLYAVTDRGPNIDCAEIGAVVGMSAEALCAGDTAAKVFPFPAFTPTIY CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCEEE TLSIGDAGVEIVDALPIKTRSGRPITGLPNPLTLTDTEGAFDADGRPLTPDASGLDVEAV EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH ARAADGSFWVAEEYGPSIVHIADDGRVLVRYVPQGLEKDLAAADYTVKGTLPAILAKRKL HHHCCCCEEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHCCEEEECCHHHHHHHHHH NRGIESLGLSADGRTLYAALQSPLVNPDTAAYKTSRAVRLLKIDAATGEALNEYVYPEDE HCCHHHHCCCCCCCEEEEEHHCCCCCCCCHHHHHCCEEEEEEEECCCCHHHHHCCCCCCC AASFTADAKAGKVKQSDVKISELVVVGQDKLVVLERISKTTKFHLVELGAGASDLLGSPW CCCEECCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHCCCCEEEEEEECCCHHHHCCCCC DDPKTSPSLEATPDLAAKGVIPLSKTLMLTAEGGPFPEKIESIALLDESTLVVISDNDFA CCCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCHHHHHEEEEECCCEEEEEECCCEE ITGDQTKVVRIALDKPWN EECCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA