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The map label for this gene is atpC

Identifier: 83592563

GI number: 83592563

Start: 1449277

End: 1449681

Strand: Direct

Name: atpC

Synonym: Rru_A1227

Alternate gene names: 83592563

Gene position: 1449277-1449681 (Clockwise)

Preceding gene: 83592562

Following gene: 83592564

Centisome position: 33.3

GC content: 67.65

Gene sequence:

>405_bases
ATGGCCGAAACCACTGAATTCGAACTGGTCTCGCCCGAGCGGCTGCTGTTTTCCGAGCCCGTGGAAATGGTGGTGGTTCC
CGGCACCGACGGCGACTTCGGTGCGATGCCCCGCCACGCCCCGCTGCTGTCGACGGTCCGTCCCGGGGTGATCAGCACCT
ATAACGGCGGCAAGGTTCAACGGCGCATCTTCGTGGCCGGCGGCTTCGCCGAAGTCACCGAGGATCGTTGCACCGTTCTG
GCCGATGAAGCCTTCGATCTCGCCAGCCTGAGCGAGGAGGCCGTTCGCGCCCGCCTCCAGGCCGCCGACGACCGGCTGAA
GGAAGCCACCAGCGAGGCCGAGAAGGCCGAGGCCGCCCAGGCCAAGGCCATCGCCGAGGCTTTGCTGGCAGCCCGCAAGG
GCTGA

Upstream 100 bases:

>100_bases
AGGCCGCCCCTCCCGTTTTACGGTGCGCGCGTTTTTCCTGGGGGCTCCGGTCGCTTTGCGGCCCCCGAGCGTCGCGCGTT
GACATCCAAAGGCGTTTGCC

Downstream 100 bases:

>100_bases
AAACCAAAGATTAGCCCGCAAGGGCTGAAAACTGAGAGATTAGCCCGCAAGGGCTGAATTTTCACTTTGCCGCGCAACCA
AACGGGGGATCAGGTGGTTA

Product: H+-transporting two-sector ATPase subunit delta/epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAETTEFELVSPERLLFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQRRIFVAGGFAEVTEDRCTVL
ADEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEAAQAKAIAEALLAARKG

Sequences:

>Translated_134_residues
MAETTEFELVSPERLLFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQRRIFVAGGFAEVTEDRCTVL
ADEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEAAQAKAIAEALLAARKG
>Mature_133_residues
AETTEFELVSPERLLFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQRRIFVAGGFAEVTEDRCTVLA
DEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEAAQAKAIAEALLAARKG

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=128, Percent_Identity=34.375, Blast_Score=74, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534525, Length=124, Percent_Identity=40.3225806451613, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_RHORT (Q2RV17)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_426315.1
- ProteinModelPortal:   Q2RV17
- SMR:   Q2RV17
- STRING:   Q2RV17
- GeneID:   3833725
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A1227
- NMPDR:   fig|1085.1.peg.3139
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   MAMTVHC
- PhylomeDB:   Q2RV17
- ProtClustDB:   CLSK745250
- BioCyc:   RRUB269796:RRU_A1227-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14307; Mature: 14176

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETTEFELVSPERLLFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQ
CCCCCCEEEECCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCEE
RRIFVAGGFAEVTEDRCTVLADEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEAAQ
EEEEEECCHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAIAEALLAARKG
HHHHHHHHHHHCCC
>Mature Secondary Structure 
AETTEFELVSPERLLFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQ
CCCCCEEEECCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCEE
RRIFVAGGFAEVTEDRCTVLADEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEAAQ
EEEEEECCHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAIAEALLAARKG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA