| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592557
Identifier: 83592557
GI number: 83592557
Start: 1440938
End: 1441924
Strand: Reverse
Name: 83592557
Synonym: Rru_A1221
Alternate gene names: NA
Gene position: 1441924-1440938 (Counterclockwise)
Preceding gene: 83592565
Following gene: 83592556
Centisome position: 33.13
GC content: 64.03
Gene sequence:
>987_bases ATGCGGCGCTTTAAAAGGGGAGGACCAGGGGCTATACCCCCGGGGGGAGCAAGCACCCGTTCCGTAATCCTACGGGCCAT CGGCCCGGGGGGCGGTATGCTCCGAATCCGACCCGCGCCCCCGAAGAAGGCAAGAACTTTCTCTCCTCCTTTCGCCCCGC GTCGGCGAAAGGCTTTCCTTGACGATTGGGCAAAGTCGGGTCAGACCATCTTTCAGGCACCCCTTATGGGAGGGCAAGAC GTGGGCGACGCCAGGGACAAAGCGAAGGATCTGAGGTCCTCGGCCGAACTCGATGAGGCTTCGGTATTGGGATACCTATT GAAGAATCCGGATTTCCTGATGGATCATCCGGAGGTTCTGATGATGGCGACTCCCCCTCGCCGCTTCGAAAAGGCTGACG ACAAGGTTATCGACATCCAGCACGTGATGCTGCGGCGGCTGCAGACCGAGATGGCCGATCTGCAAGACTGCGCCGAGCAG CTGATCATCACCACGCGCTCGAACATGGCGACTCAGAAGGGCACCTTGCAAGCGGCCCTGGCCTTGCTTGATTGCGAGGG CCTGGGGCCTTTGGTGCGCACGGTGGCCGAAGATCTGCCGATGCTGCTCGATGTCGACATCTGCGCCCTGCGGCTTGAAC GCCACGTTCTGCCGCCCCCGGGCATGCCGGTCGAGGACAACGACGACGGCCTGGACCTGACCACCCTGCCCGCCGGCTTC GTCGACGACCTGTTTGGCCCGGAAGCCCATGCGGTGCTGCGCCCCGCGGTCGATGCCGAAGACAGCATCTATGGCGATAT CTCGGGCATCGTCCGCTCCGACGCCCTGGTGCGGGTCGAGCCGGGCGATGGCCTGCCGCCGGGGATCCTGGCCCTTGGCA CCCGGGTGGAAGGCACCTTCGAGCCCGAGATGGCGATGGATCTTCTGGTTTTCCTGGCCAAGGTCGCCGAAGCCTGCGTG CGACGATGGGCCCCCGACACCCTGTGA
Upstream 100 bases:
>100_bases CGGCGTGGGCGTCTTCGGGGAAAAGCTCCCGGGAACCGGGGGGCAAAGCCGGGAGACCGGCCATCGGCGAACCTCCGCGC CATCGGGGGGCGATACCCTG
Downstream 100 bases:
>100_bases GCATGGATCGTCCGGATTTACCAGCCGACCCCGCCCCGCACCCCGACGAGGCCGGCGTGGTGCCGGGGCTGTTCCTGCCC TGCGCTAGCGATCTGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRRFKRGGPGAIPPGGASTRSVILRAIGPGGGMLRIRPAPPKKARTFSPPFAPRRRKAFLDDWAKSGQTIFQAPLMGGQD VGDARDKAKDLRSSAELDEASVLGYLLKNPDFLMDHPEVLMMATPPRRFEKADDKVIDIQHVMLRRLQTEMADLQDCAEQ LIITTRSNMATQKGTLQAALALLDCEGLGPLVRTVAEDLPMLLDVDICALRLERHVLPPPGMPVEDNDDGLDLTTLPAGF VDDLFGPEAHAVLRPAVDAEDSIYGDISGIVRSDALVRVEPGDGLPPGILALGTRVEGTFEPEMAMDLLVFLAKVAEACV RRWAPDTL
Sequences:
>Translated_328_residues MRRFKRGGPGAIPPGGASTRSVILRAIGPGGGMLRIRPAPPKKARTFSPPFAPRRRKAFLDDWAKSGQTIFQAPLMGGQD VGDARDKAKDLRSSAELDEASVLGYLLKNPDFLMDHPEVLMMATPPRRFEKADDKVIDIQHVMLRRLQTEMADLQDCAEQ LIITTRSNMATQKGTLQAALALLDCEGLGPLVRTVAEDLPMLLDVDICALRLERHVLPPPGMPVEDNDDGLDLTTLPAGF VDDLFGPEAHAVLRPAVDAEDSIYGDISGIVRSDALVRVEPGDGLPPGILALGTRVEGTFEPEMAMDLLVFLAKVAEACV RRWAPDTL >Mature_328_residues MRRFKRGGPGAIPPGGASTRSVILRAIGPGGGMLRIRPAPPKKARTFSPPFAPRRRKAFLDDWAKSGQTIFQAPLMGGQD VGDARDKAKDLRSSAELDEASVLGYLLKNPDFLMDHPEVLMMATPPRRFEKADDKVIDIQHVMLRRLQTEMADLQDCAEQ LIITTRSNMATQKGTLQAALALLDCEGLGPLVRTVAEDLPMLLDVDICALRLERHVLPPPGMPVEDNDDGLDLTTLPAGF VDDLFGPEAHAVLRPAVDAEDSIYGDISGIVRSDALVRVEPGDGLPPGILALGTRVEGTFEPEMAMDLLVFLAKVAEACV RRWAPDTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35585; Mature: 35585
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFKRGGPGAIPPGGASTRSVILRAIGPGGGMLRIRPAPPKKARTFSPPFAPRRRKAFL CCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH DDWAKSGQTIFQAPLMGGQDVGDARDKAKDLRSSAELDEASVLGYLLKNPDFLMDHPEVL HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEE MMATPPRRFEKADDKVIDIQHVMLRRLQTEMADLQDCAEQLIITTRSNMATQKGTLQAAL EEECCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH ALLDCEGLGPLVRTVAEDLPMLLDVDICALRLERHVLPPPGMPVEDNDDGLDLTTLPAGF HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHH VDDLFGPEAHAVLRPAVDAEDSIYGDISGIVRSDALVRVEPGDGLPPGILALGTRVEGTF HHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCCCC EPEMAMDLLVFLAKVAEACVRRWAPDTL CHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRFKRGGPGAIPPGGASTRSVILRAIGPGGGMLRIRPAPPKKARTFSPPFAPRRRKAFL CCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH DDWAKSGQTIFQAPLMGGQDVGDARDKAKDLRSSAELDEASVLGYLLKNPDFLMDHPEVL HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEE MMATPPRRFEKADDKVIDIQHVMLRRLQTEMADLQDCAEQLIITTRSNMATQKGTLQAAL EEECCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH ALLDCEGLGPLVRTVAEDLPMLLDVDICALRLERHVLPPPGMPVEDNDDGLDLTTLPAGF HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHH VDDLFGPEAHAVLRPAVDAEDSIYGDISGIVRSDALVRVEPGDGLPPGILALGTRVEGTF HHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCCCC EPEMAMDLLVFLAKVAEACVRRWAPDTL CHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA