| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592545
Identifier: 83592545
GI number: 83592545
Start: 1426423
End: 1427673
Strand: Reverse
Name: 83592545
Synonym: Rru_A1209
Alternate gene names: NA
Gene position: 1427673-1426423 (Counterclockwise)
Preceding gene: 83592552
Following gene: 83592542
Centisome position: 32.8
GC content: 73.7
Gene sequence:
>1251_bases ATGACACCGCCCCCCGATGCCCCCGCCGCCGCCGCCTCCCCGCCCCGCTGGCGCCGGGCGCTTGGCGTTTTTGGCGCCTT CCTGACGCTGGGGCTGACGGCCTTCGGCGGACCGATCGCCCATGTCGGATATTTTCACCGGGCTTTCGTCGTGCGCCGGG GCTGGCTTGACGAGGCGGCCTTCGCCGAACGGTTGGCGCTGTGTCAATTGTTGCCCGGACCGACCTCCAGCCAATTGGGG GTCGCCATCGGCCTGCGGCGGGCGGGAGCGGCCGGGGGGCTGGCCGCTTTCCTTGGCTTCACCCTGCCCTCGGCCTTGCT GATGGCGGCCCTGGCCCTGACGCTGGCCCGGCTCGACGGCCCGCTGGCCGGCGGGCTGATCGCCGGCCTCACCCTTGCCG CCGTCGCCGTGGTCGCCGATGCCGTCCTCGGCATGGCCCGCCAGCTTTGCCCCGACCGCCGGCGGGCCAGCCTCGCCCTG CTCACCCTGGCCTGCGTGCTTGCCTGGCCAAACGACGGTCCCCTGGCGCCCTGGGGTCAGATGATGCCGCTGGCCGTGGC GGCGGCCCTGGGCGCGGCCCAAGGCTGGCGGCACCGCGACCGCCAAGCGACGCCCGGCGCCCGGGTTCGCGGCTTTCCCG GCTGGCGCTGGGGGATCGGCTTTCTGGGTCTGGCCGGCCTGGGGTTCTTCGGCCTTCCCCTTCTGGCCGCCCTTGCGCCC ACACCGCTGACCACCCTCGCCGCCGCGCTGTTTCAAACCGGCGCCCTGGTTTTCGGCGGCGGTCATGTGGTGCTGCCTTT GCTTCAGGGCACCCTGGTGGAGGGTGCCCTGATCGATGGCGCGATCTTGACCACCGGCTACGGTCTGGCCCAGGCCATGC CCGGGCCGCTGTTCACCATCGCGGCTTACCTGGGGGCGGCGATCGCCCCGCCGGGGGCGGCGGTGGGCTACGCCGGCGTC GCCATCCTGGCGATTTTCCTGCCCGGCTTCTTGCTGCTGGCCGCCTGCTTGCCCTTCTGGGCGGCCCTGCGCCGCAACCC GCTTCTGACCGGGGCGATCGAGGCGGTCAACGCCGCCGTCGTCGGCCTGCTCGCCGCCGCCCTGTGGGATCTGTTGATCG CCACCGCGGTCCGCGGCGGCACCGCCGCCGCCCTGGCCGTTCTGACCTTCCTGGCGCTGCGCTTTTGGCGAGCGCCGCCC TGGCTGGCCGTGCTGATCCCGGCCCTGGCCGGGGCGGCGGGAATGCTATAG
Upstream 100 bases:
>100_bases ACGCCATGGTCGCGGTTTTGGGGTAACGCAAGGATCCCCGGGGCGAGGGCTCACAAAAGCGTCTCTTGCCCGCAAAGGCG CGGGCAGGCAGGCTTTGGCG
Downstream 100 bases:
>100_bases GCGAGCAAGCCTATACGTGGGCCTGGGCCAGATAGGCCTCGCTTTGCATCTCCATCAGCCGCGACACGGTGCGCTGGAAC TCGAAGGCGCCGGGACCATC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTPPPDAPAAAASPPRWRRALGVFGAFLTLGLTAFGGPIAHVGYFHRAFVVRRGWLDEAAFAERLALCQLLPGPTSSQLG VAIGLRRAGAAGGLAAFLGFTLPSALLMAALALTLARLDGPLAGGLIAGLTLAAVAVVADAVLGMARQLCPDRRRASLAL LTLACVLAWPNDGPLAPWGQMMPLAVAAALGAAQGWRHRDRQATPGARVRGFPGWRWGIGFLGLAGLGFFGLPLLAALAP TPLTTLAAALFQTGALVFGGGHVVLPLLQGTLVEGALIDGAILTTGYGLAQAMPGPLFTIAAYLGAAIAPPGAAVGYAGV AILAIFLPGFLLLAACLPFWAALRRNPLLTGAIEAVNAAVVGLLAAALWDLLIATAVRGGTAAALAVLTFLALRFWRAPP WLAVLIPALAGAAGML
Sequences:
>Translated_416_residues MTPPPDAPAAAASPPRWRRALGVFGAFLTLGLTAFGGPIAHVGYFHRAFVVRRGWLDEAAFAERLALCQLLPGPTSSQLG VAIGLRRAGAAGGLAAFLGFTLPSALLMAALALTLARLDGPLAGGLIAGLTLAAVAVVADAVLGMARQLCPDRRRASLAL LTLACVLAWPNDGPLAPWGQMMPLAVAAALGAAQGWRHRDRQATPGARVRGFPGWRWGIGFLGLAGLGFFGLPLLAALAP TPLTTLAAALFQTGALVFGGGHVVLPLLQGTLVEGALIDGAILTTGYGLAQAMPGPLFTIAAYLGAAIAPPGAAVGYAGV AILAIFLPGFLLLAACLPFWAALRRNPLLTGAIEAVNAAVVGLLAAALWDLLIATAVRGGTAAALAVLTFLALRFWRAPP WLAVLIPALAGAAGML >Mature_415_residues TPPPDAPAAAASPPRWRRALGVFGAFLTLGLTAFGGPIAHVGYFHRAFVVRRGWLDEAAFAERLALCQLLPGPTSSQLGV AIGLRRAGAAGGLAAFLGFTLPSALLMAALALTLARLDGPLAGGLIAGLTLAAVAVVADAVLGMARQLCPDRRRASLALL TLACVLAWPNDGPLAPWGQMMPLAVAAALGAAQGWRHRDRQATPGARVRGFPGWRWGIGFLGLAGLGFFGLPLLAALAPT PLTTLAAALFQTGALVFGGGHVVLPLLQGTLVEGALIDGAILTTGYGLAQAMPGPLFTIAAYLGAAIAPPGAAVGYAGVA ILAIFLPGFLLLAACLPFWAALRRNPLLTGAIEAVNAAVVGLLAAALWDLLIATAVRGGTAAALAVLTFLALRFWRAPPW LAVLIPALAGAAGML
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 42175; Mature: 42043
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPPDAPAAAASPPRWRRALGVFGAFLTLGLTAFGGPIAHVGYFHRAFVVRRGWLDEAA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH FAERLALCQLLPGPTSSQLGVAIGLRRAGAAGGLAAFLGFTLPSALLMAALALTLARLDG HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLAGGLIAGLTLAAVAVVADAVLGMARQLCPDRRRASLALLTLACVLAWPNDGPLAPWGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH MMPLAVAAALGAAQGWRHRDRQATPGARVRGFPGWRWGIGFLGLAGLGFFGLPLLAALAP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPLTTLAAALFQTGALVFGGGHVVLPLLQGTLVEGALIDGAILTTGYGLAQAMPGPLFTI CCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCHHHHH AAYLGAAIAPPGAAVGYAGVAILAIFLPGFLLLAACLPFWAALRRNPLLTGAIEAVNAAV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VGLLAAALWDLLIATAVRGGTAAALAVLTFLALRFWRAPPWLAVLIPALAGAAGML HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPPPDAPAAAASPPRWRRALGVFGAFLTLGLTAFGGPIAHVGYFHRAFVVRRGWLDEAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH FAERLALCQLLPGPTSSQLGVAIGLRRAGAAGGLAAFLGFTLPSALLMAALALTLARLDG HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLAGGLIAGLTLAAVAVVADAVLGMARQLCPDRRRASLALLTLACVLAWPNDGPLAPWGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH MMPLAVAAALGAAQGWRHRDRQATPGARVRGFPGWRWGIGFLGLAGLGFFGLPLLAALAP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPLTTLAAALFQTGALVFGGGHVVLPLLQGTLVEGALIDGAILTTGYGLAQAMPGPLFTI CCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCHHHHH AAYLGAAIAPPGAAVGYAGVAILAIFLPGFLLLAACLPFWAALRRNPLLTGAIEAVNAAV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VGLLAAALWDLLIATAVRGGTAAALAVLTFLALRFWRAPPWLAVLIPALAGAAGML HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]