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The map label for this gene is yjbJ [H]

Identifier: 83592511

GI number: 83592511

Start: 1391274

End: 1391471

Strand: Reverse

Name: yjbJ [H]

Synonym: Rru_A1175

Alternate gene names: 83592511

Gene position: 1391471-1391274 (Counterclockwise)

Preceding gene: 83592517

Following gene: 83592509

Centisome position: 31.97

GC content: 55.56

Gene sequence:

>198_bases
ATGAACCGCGAGGAACTCACCGGTAACTGGAACCAGCTTTCTGGCAAGATCAAGCAGAAGTGGGGAAAGTTGACTGACGA
TGACCTGAAGGTCGCTCAGGGCAACCACCAGGAACTGGTGGGCAAGATCCAGGAGCGCTATGGCATCGCCAAGGAAGAAG
CCGAGCGTGAAGTCGATATGTTCCTGACCCGCCACTAG

Upstream 100 bases:

>100_bases
GGGAACGCTTCGCGGGCCAAGGCCGTTGTGCTGTCAACGATCCACAAATGGTTATGCCGCGTGGATGAAAGACGCTGAAA
CAATCGAAGGGACGAACATT

Downstream 100 bases:

>100_bases
ATCAAACCGCGTTAAAGGGGAACTCTTTAACGCGGACACTTTGATCTAGAATCGATAGATCAGAGCGGCGATGGCGCGGA
AAACCGGTATCCACTTTTCC

Product: CsbD-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNREELTGNWNQLSGKIKQKWGKLTDDDLKVAQGNHQELVGKIQERYGIAKEEAEREVDMFLTRH

Sequences:

>Translated_65_residues
MNREELTGNWNQLSGKIKQKWGKLTDDDLKVAQGNHQELVGKIQERYGIAKEEAEREVDMFLTRH
>Mature_65_residues
MNREELTGNWNQLSGKIKQKWGKLTDDDLKVAQGNHQELVGKIQERYGIAKEEAEREVDMFLTRH

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

Organism=Escherichia coli, GI1790479, Length=65, Percent_Identity=55.3846153846154, Blast_Score=79, Evalue=5e-17,

Paralogues:

None

Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 7612; Mature: 7612

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREELTGNWNQLSGKIKQKWGKLTDDDLKVAQGNHQELVGKIQERYGIAKEEAEREVDM
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
FLTRH
HHCCC
>Mature Secondary Structure
MNREELTGNWNQLSGKIKQKWGKLTDDDLKVAQGNHQELVGKIQERYGIAKEEAEREVDM
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
FLTRH
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]