| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fusA [C]
Identifier: 83592476
GI number: 83592476
Start: 1344652
End: 1346667
Strand: Direct
Name: fusA [C]
Synonym: Rru_A1140
Alternate gene names: 83592476
Gene position: 1344652-1346667 (Clockwise)
Preceding gene: 83592475
Following gene: 83592480
Centisome position: 30.89
GC content: 65.38
Gene sequence:
>2016_bases ATGCCCGACAGAGCGTCCGCGCCGCGTGTGGCGGCGATCGTTGGGCCTTACGCCAGTGGCAAGACCAGTCTTTTGGAAAG CCTGCTGCTGGCGACCGAGGCCATCCACCGCAAGGGAACGATCCAAGACCACAATACCGTCGGCGATTCCTCTCCCGAAG CCCGCGACCGAGAAATGGGCGTCGAGGTCAATCTGGCCGAAACCACCTATCTTGGCGGACAATGGACCTTTCTCGACTGT CCGGGATCGGTCGAGTTCATGCAAGACACCTATAACGCGCTGACCGTCTGCGATGTCGCCGTCGTCGTCTGCGAACCCGA TCCCGCCCGCGCCGTGATGCTGACGCCGCTGTTGAAATTCCTCGATAGCCGCGCCATCCCCCATATGATCTTCATCAACA AGATCGAAACCACCGAAACCCACCTGCGCGACATGATCGAGGCCCTGCAGATGGTCTCGACCAAGCCGCTGGTCGCCCGC GAGATTCCCATCCGCGAAGACGGCAAGGTGGTTGGCTATCTCGATCTGGTCAGCGAGCGCGCCTATCGCTACAAGCCGGG CGAGGCCAGCGATCTGATCTCGATCCCCGAGGATCTGAAAGACCGCCACGTCAACGAACGCCAGGAGCTTTTGGAAAATC TGGCCGATTACGACGACGCCCTGCTCGAGGGGCTGTTGTCGGACGTGGTGCCGCCCAAGGGCGCGGTCTATGACTCCCTG GCCCGCGATCTGGCCGAGGATCTGGTGGTGCCGGTGTTCTTTGGCGGCGCCCTGGCCGATAACGGCATCCGCCGCCTGCT CAAGGCGCTCCGCCACGAAAGCCCGACGCTGGAGGAGACCCGCGCCCGCCTGGGCATCGAAGGCAAGGGGCCGGTCATCC AGGTCTTCAAGACCCAGCACGCCGAGCATATGGGCAAGCTGTCGTTGGCCCGGCTATGGAACGGCACCTTGAAGGATGGT CAGGCGCTGAACGGCGATCGCGCCACCGGGCTTTTCAGCTTCCCGGCCGGCCAGCAAGCCAAGGTCGATAGTGTCGGCGC CGGGGCGGTCGTGGGCATCGGCAAGCTGGAAAAGCTGTCGACCGGCGCCCTGGTTGGCGGCGACAGCGCCGCCGACGACC CGCCGGTCCTGGGACCGCTGTTCGCCCTTGCCCTGCATGCCCGCAAACAGGGCGACGATGTCAAGCTGACCGGCGCCCTG GCCAAGCTGTGCGAGGAGGATCCCTCGCTGCGCGTCGAAAACAATCCCGACACCGCCGAGCTGCTGCTGTGGGGGCAGGG CGATATCCATCTGCAGATCGCCGTGCGCCGGCTGGCCCGCCAGTTCCACGTCGAGGTCGAGGCCCATCGTCCGCAGGTGC CCTATAAGGAGACCATCCGCAAGGCGACCAGCCGCCAGGGCCGCTTCAAGCGCCAGACCGGCGGCCACGGCCAATTCGGC GATGTGCATCTCGATATCAAGCCGCTGTCGCGCGGCGAAGGCTTCGTCTTCACCGACAGCATCACCGGCGGCGTGGTCCC CCGGCAGTATATTCCGGCGGTCGAACAGGGGATCCGCGAGTTCCTGCCGCGCGGCCCCTTGGGCTTCCCGGTGGTCGATG TCGGCGTCACCTTGACCGATGGCAGCTATCACGTGGTCGACAGCTCGGAACAGGCCTTCAAATCGGCCGCCCAGCTGGCG ATGCGCGAGGGCATGCCGGCCTGCGAGCCGGTGCTGCTTGAACCGATCCTGCGCGTCGAGATCAGCGTGCCGACCGACGC CACCAGCCGGGCCCAGCGCGCCCTGACCACACGGCGCGGCCAGATCCTCGGCTATACGCCCAAAGAGGGGTGGAGCGGCT GGGACGTGGTCGAGGGCTATCTGCCCCAATCCGAAATGCACGATCTGATCACCGATCTGCGCTCGGCGACCATGGGCGTG GGCACCTTCGCCTGGAGCTTCGACCACCTGCAAGAGGTCATCGGCAAACAGGCCGACGAGGTGGTCACCGCCCGCAAACT GGTTTTGGCCGGCTAA
Upstream 100 bases:
>100_bases GCGTCGCGACCCGGCTCTGGGGTATCGGGGGGCGTTGCCGCAGGTCGCCGGGTTCGGTCCGCGCCCCCATCAATGAAGAA TGATCAGGGGAGTGAAGCCC
Downstream 100 bases:
>100_bases CGGCGCGCGCCCTCATCCAAAGCGGGAGGCCCCCAAAGCGGGCCTCCCAGTCCGTGATCGGAAGATCGCATGGAGCGATC GGACGATTAGACTTTATGTT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MPDRASAPRVAAIVGPYASGKTSLLESLLLATEAIHRKGTIQDHNTVGDSSPEARDREMGVEVNLAETTYLGGQWTFLDC PGSVEFMQDTYNALTVCDVAVVVCEPDPARAVMLTPLLKFLDSRAIPHMIFINKIETTETHLRDMIEALQMVSTKPLVAR EIPIREDGKVVGYLDLVSERAYRYKPGEASDLISIPEDLKDRHVNERQELLENLADYDDALLEGLLSDVVPPKGAVYDSL ARDLAEDLVVPVFFGGALADNGIRRLLKALRHESPTLEETRARLGIEGKGPVIQVFKTQHAEHMGKLSLARLWNGTLKDG QALNGDRATGLFSFPAGQQAKVDSVGAGAVVGIGKLEKLSTGALVGGDSAADDPPVLGPLFALALHARKQGDDVKLTGAL AKLCEEDPSLRVENNPDTAELLLWGQGDIHLQIAVRRLARQFHVEVEAHRPQVPYKETIRKATSRQGRFKRQTGGHGQFG DVHLDIKPLSRGEGFVFTDSITGGVVPRQYIPAVEQGIREFLPRGPLGFPVVDVGVTLTDGSYHVVDSSEQAFKSAAQLA MREGMPACEPVLLEPILRVEISVPTDATSRAQRALTTRRGQILGYTPKEGWSGWDVVEGYLPQSEMHDLITDLRSATMGV GTFAWSFDHLQEVIGKQADEVVTARKLVLAG
Sequences:
>Translated_671_residues MPDRASAPRVAAIVGPYASGKTSLLESLLLATEAIHRKGTIQDHNTVGDSSPEARDREMGVEVNLAETTYLGGQWTFLDC PGSVEFMQDTYNALTVCDVAVVVCEPDPARAVMLTPLLKFLDSRAIPHMIFINKIETTETHLRDMIEALQMVSTKPLVAR EIPIREDGKVVGYLDLVSERAYRYKPGEASDLISIPEDLKDRHVNERQELLENLADYDDALLEGLLSDVVPPKGAVYDSL ARDLAEDLVVPVFFGGALADNGIRRLLKALRHESPTLEETRARLGIEGKGPVIQVFKTQHAEHMGKLSLARLWNGTLKDG QALNGDRATGLFSFPAGQQAKVDSVGAGAVVGIGKLEKLSTGALVGGDSAADDPPVLGPLFALALHARKQGDDVKLTGAL AKLCEEDPSLRVENNPDTAELLLWGQGDIHLQIAVRRLARQFHVEVEAHRPQVPYKETIRKATSRQGRFKRQTGGHGQFG DVHLDIKPLSRGEGFVFTDSITGGVVPRQYIPAVEQGIREFLPRGPLGFPVVDVGVTLTDGSYHVVDSSEQAFKSAAQLA MREGMPACEPVLLEPILRVEISVPTDATSRAQRALTTRRGQILGYTPKEGWSGWDVVEGYLPQSEMHDLITDLRSATMGV GTFAWSFDHLQEVIGKQADEVVTARKLVLAG >Mature_670_residues PDRASAPRVAAIVGPYASGKTSLLESLLLATEAIHRKGTIQDHNTVGDSSPEARDREMGVEVNLAETTYLGGQWTFLDCP GSVEFMQDTYNALTVCDVAVVVCEPDPARAVMLTPLLKFLDSRAIPHMIFINKIETTETHLRDMIEALQMVSTKPLVARE IPIREDGKVVGYLDLVSERAYRYKPGEASDLISIPEDLKDRHVNERQELLENLADYDDALLEGLLSDVVPPKGAVYDSLA RDLAEDLVVPVFFGGALADNGIRRLLKALRHESPTLEETRARLGIEGKGPVIQVFKTQHAEHMGKLSLARLWNGTLKDGQ ALNGDRATGLFSFPAGQQAKVDSVGAGAVVGIGKLEKLSTGALVGGDSAADDPPVLGPLFALALHARKQGDDVKLTGALA KLCEEDPSLRVENNPDTAELLLWGQGDIHLQIAVRRLARQFHVEVEAHRPQVPYKETIRKATSRQGRFKRQTGGHGQFGD VHLDIKPLSRGEGFVFTDSITGGVVPRQYIPAVEQGIREFLPRGPLGFPVVDVGVTLTDGSYHVVDSSEQAFKSAAQLAM REGMPACEPVLLEPILRVEISVPTDATSRAQRALTTRRGQILGYTPKEGWSGWDVVEGYLPQSEMHDLITDLRSATMGVG TFAWSFDHLQEVIGKQADEVVTARKLVLAG
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=688, Percent_Identity=25.4360465116279, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI19923640, Length=669, Percent_Identity=25.2615844544096, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI25306287, Length=639, Percent_Identity=25.1956181533646, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI25306283, Length=333, Percent_Identity=26.7267267267267, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1789738, Length=692, Percent_Identity=29.4797687861272, Blast_Score=276, Evalue=3e-75, Organism=Escherichia coli, GI1790835, Length=494, Percent_Identity=22.2672064777328, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17533571, Length=665, Percent_Identity=27.0676691729323, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17556745, Length=714, Percent_Identity=21.0084033613445, Blast_Score=116, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323098, Length=683, Percent_Identity=28.2576866764275, Blast_Score=248, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6322359, Length=694, Percent_Identity=21.9020172910663, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI24582462, Length=684, Percent_Identity=27.046783625731, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI221458488, Length=699, Percent_Identity=23.4620886981402, Blast_Score=140, Evalue=3e-33,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 73045; Mature: 72914
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRASAPRVAAIVGPYASGKTSLLESLLLATEAIHRKGTIQDHNTVGDSSPEARDREMG CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC VEVNLAETTYLGGQWTFLDCPGSVEFMQDTYNALTVCDVAVVVCEPDPARAVMLTPLLKF EEEEEEHEEEECCEEEEEECCCCHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHH LDSRAIPHMIFINKIETTETHLRDMIEALQMVSTKPLVAREIPIREDGKVVGYLDLVSER HHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEHHHHHHHH AYRYKPGEASDLISIPEDLKDRHVNERQELLENLADYDDALLEGLLSDVVPPKGAVYDSL HHCCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARDLAEDLVVPVFFGGALADNGIRRLLKALRHESPTLEETRARLGIEGKGPVIQVFKTQH HHHHHHHCEEHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEEHHHH AEHMGKLSLARLWNGTLKDGQALNGDRATGLFSFPAGQQAKVDSVGAGAVVGIGKLEKLS HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCHHHHC TGALVGGDSAADDPPVLGPLFALALHARKQGDDVKLTGALAKLCEEDPSLRVENNPDTAE CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEECCCCCCEE LLLWGQGDIHLQIAVRRLARQFHVEVEAHRPQVPYKETIRKATSRQGRFKRQTGGHGQFG EEEECCCCEEHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DVHLDIKPLSRGEGFVFTDSITGGVVPRQYIPAVEQGIREFLPRGPLGFPVVDVGVTLTD EEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC GSYHVVDSSEQAFKSAAQLAMREGMPACEPVLLEPILRVEISVPTDATSRAQRALTTRRG CCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCHHHEEEEECCCCHHHHHHHHHHHHCC QILGYTPKEGWSGWDVVEGYLPQSEMHDLITDLRSATMGVGTFAWSFDHLQEVIGKQADE CEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH VVTARKLVLAG HHHHHHHHCCC >Mature Secondary Structure PDRASAPRVAAIVGPYASGKTSLLESLLLATEAIHRKGTIQDHNTVGDSSPEARDREMG CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC VEVNLAETTYLGGQWTFLDCPGSVEFMQDTYNALTVCDVAVVVCEPDPARAVMLTPLLKF EEEEEEHEEEECCEEEEEECCCCHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHH LDSRAIPHMIFINKIETTETHLRDMIEALQMVSTKPLVAREIPIREDGKVVGYLDLVSER HHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEHHHHHHHH AYRYKPGEASDLISIPEDLKDRHVNERQELLENLADYDDALLEGLLSDVVPPKGAVYDSL HHCCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARDLAEDLVVPVFFGGALADNGIRRLLKALRHESPTLEETRARLGIEGKGPVIQVFKTQH HHHHHHHCEEHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEEHHHH AEHMGKLSLARLWNGTLKDGQALNGDRATGLFSFPAGQQAKVDSVGAGAVVGIGKLEKLS HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCHHHHC TGALVGGDSAADDPPVLGPLFALALHARKQGDDVKLTGALAKLCEEDPSLRVENNPDTAE CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEECCCCCCEE LLLWGQGDIHLQIAVRRLARQFHVEVEAHRPQVPYKETIRKATSRQGRFKRQTGGHGQFG EEEECCCCEEHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DVHLDIKPLSRGEGFVFTDSITGGVVPRQYIPAVEQGIREFLPRGPLGFPVVDVGVTLTD EEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC GSYHVVDSSEQAFKSAAQLAMREGMPACEPVLLEPILRVEISVPTDATSRAQRALTTRRG CCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCHHHEEEEECCCCHHHHHHHHHHHHCC QILGYTPKEGWSGWDVVEGYLPQSEMHDLITDLRSATMGVGTFAWSFDHLQEVIGKQADE CEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH VVTARKLVLAG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]