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The map label for this gene is 83592461

Identifier: 83592461

GI number: 83592461

Start: 1326652

End: 1326966

Strand: Direct

Name: 83592461

Synonym: Rru_A1125

Alternate gene names: NA

Gene position: 1326652-1326966 (Clockwise)

Preceding gene: 83592460

Following gene: 83592462

Centisome position: 30.48

GC content: 61.59

Gene sequence:

>315_bases
ATGAGCTATGCCACGGATCCTATCGCCAAAGCCTTGAAAGAGGCCCGCGAAGCCAAGGCGATGAGCCAGCGCGAGCTGAG
CGCCAATACGGGTGTGCCGCAGTCGCATATCTCGAAGATCGAGAGGAACGGCGTCGATCTGCGGCTTTCGAGTTTGATCG
CCTTGGCCCATGGGGTGGGCCTTGATCTGGTTCTTGTGCCGCGCCAGGCTTTGCCCGCCGTTCGGGTGATCCTTCAGAGT
GCGCGCGGCCAGCCCGAAAAGGCCAACCGTCCGGCCTATCGCCTGGATGAGGACGAGGATGAGGACGATGGATGA

Upstream 100 bases:

>100_bases
GATCGTCCGCCTGTAAGGCGGGCAAGCCGGCTCTTGCACCTCGGCCGATCTGCTATTCTCTATAGAAAGCGACTTTTGAT
AGAGAAAAGTAGATCGCCCG

Downstream 100 bases:

>100_bases
CGCCGGCCGTCTTTCTGTCGTTCTCCACGGTCGGACGATCGGTTCGCTGACCCGTTTTGCCGGCGACCTAGACGTATCAT
AATATGGGTAGCTACAATTA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSYATDPIAKALKEAREAKAMSQRELSANTGVPQSHISKIERNGVDLRLSSLIALAHGVGLDLVLVPRQALPAVRVILQS
ARGQPEKANRPAYRLDEDEDEDDG

Sequences:

>Translated_104_residues
MSYATDPIAKALKEAREAKAMSQRELSANTGVPQSHISKIERNGVDLRLSSLIALAHGVGLDLVLVPRQALPAVRVILQS
ARGQPEKANRPAYRLDEDEDEDDG
>Mature_103_residues
SYATDPIAKALKEAREAKAMSQRELSANTGVPQSHISKIERNGVDLRLSSLIALAHGVGLDLVLVPRQALPAVRVILQSA
RGQPEKANRPAYRLDEDEDEDDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11301; Mature: 11170

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYATDPIAKALKEAREAKAMSQRELSANTGVPQSHISKIERNGVDLRLSSLIALAHGVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
LDLVLVPRQALPAVRVILQSARGQPEKANRPAYRLDEDEDEDDG
CEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYATDPIAKALKEAREAKAMSQRELSANTGVPQSHISKIERNGVDLRLSSLIALAHGVG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
LDLVLVPRQALPAVRVILQSARGQPEKANRPAYRLDEDEDEDDG
CEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]