| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is cya3 [H]
Identifier: 83592407
GI number: 83592407
Start: 1260786
End: 1262828
Strand: Reverse
Name: cya3 [H]
Synonym: Rru_A1071
Alternate gene names: 83592407
Gene position: 1262828-1260786 (Counterclockwise)
Preceding gene: 83592408
Following gene: 83592406
Centisome position: 29.01
GC content: 67.99
Gene sequence:
>2043_bases ATGGCCTCTATGACCCACTACGAGGTTTACCTGATGGAGCTGCGCGGCGATTGGTCGCTGCAGCAGCGCTACGTCAGCAG CGAGCGCCAGGAGGCGATCGACGAAGCCAAGCGCTTGGAAGCCGAGCTTAATCTGCCGACCAAGGTGGTGCGCGAGCTGT TCAATCCGCAAAGCGGCATGGCCGAGGAACAGGTCGTTTACATCAGCCCCAAGGCCCGGGAACTGCGCGAGCGCGCGATG CGCCGGGCCGGACCGCACGCCGCCGGCGGCGGTCCCGACTCGTGGGTCAGCTCCCGGGGCGAGAAGGCGAAGGCCAAGGG CAAAGCCCCCGCCACCTCGCTCAGCGACCTGATGGCCCGCATGATTCTGGTGGTGACGGCCAGCCTGATCCTGGCGGGCA TCGGCGGTTGGTTGGCCCCCTCGCTGCTGTCGGCCCTGAGCCTGACCACCGGCGGCGGGCCGGCCAGCGGCAATATGCGC GGGGTGATGGTCGGGGTTTTCCTGTTCCTGTTCACGGTGAGTTTTCTGGTGATCGGCCGCAAGCTGATCCCTTACGCCGA AATCCTGTCGCGGCCGAAGAAGACCAAGCCGATCGAGGAGGCGATCGGCCAGCGCCCCGATATGGCGCCCGGCGCCCACC TTGCCCCGCCGCCCAAGGCCGCAACGAGCGAAGAGGCGCTGTCGAGCATCGATCCGGTCGCCTTGATGGAGGATATGGGG CCGATCCCGGTTCCGCCGCCGCCAACCGAGCCCGAGCAAAAGATCCCCGCGGCCCAGTCGCGCAAGGCCCGGAAGAAAGC CGCCGAGGCCCGCGCCGCCGAGGAGGAGGCCGAGCGACGCCGGCGCGAGAACCAGGATTTCCAAGAGCACGACGCCCGCG AGATGGCGGCGCGCGAAAAGGAAAAGCGCGCGAAAGAGGCCGAAGCGCGCAAAGCCGCCGAGAAGGAGGCCGAGGACAAA GCCGCCGCCGAGAAGGAGGCTGAGGAAAAAGCCGCCGAACAGGCCAAGGCCGCCGAAACCCTCGCGGCCGAAGACATCGC CTCCGAGCCCCCCGCCTCCTCGCCCGAGCAGGACCGCCTGCGGCTGACCGCCCTGAGTTTTCTGGGCGAGATGGTGGCGG CGCTAAAGGTCAGCCATCCCCAGCTCGATGTTTATGACCGCTTCGGCATCAATCTGTTCCTGGCCGGCGCCTGCGAGACG CTGGTGGCGGGGAACGATCTGAGCGGATCGGCCAAGCCCGCCCTGCTGCGCGAAATGCTTGGGGTGATGGGCACCCGCCC GGCCCTGGCCCTGATGTTCTCCGACAAGCTCGATGAATATCTGATGGAGCCGCGCTACATGCAGATGCTCCAGGCCGGAC GCCAGGCCATGGGGATGAAGCTGGCGGGCGGTGGGGAGCCCTTCGCCCCCCTGCCGCAGTTGATGGCCGACTGGCGCGCC CCCCAGGCCGCCCGGCCGGCGACGGCGAGCACGGTGGCCATCGTCTTTACCGATATGGTCGGCTCGACCGATATCAACGC CCGCTTCGGCGACCGCCACAGTCACGAGATCACCCGCGTTCATAACGCCATCGTCCGCGCCGCGCTGGGCCGTTTCGACG GCCGCGAGGTCAAACATACGGGTGATGGCATCATGGCCACCTTCCCCGTGGTCTCCCAGGCGGTCGAGGCGATGATCGAG GTGCAAAAGGCCCTGGCCGAACACAACCGCATCGCCCCCGACCTGCGCCTTGATTTGCGCGTCGGCATCAATGCCGGCGA GCCTTTGGTCGACGAGAACGACTACCACGGCCTGTCGGTCACCCTGGCCGCCCGCCTCTGCGCCCAGGCCCAAGGCGGCG AGGTGCTGTGCTCGGGCGTGGTCCGCGACCTCGCCCAGGGCAAGGATCTGACCTTCCGCGATCGCGGTCAGGTCATGCTC AAGGGCATCGGCGAACCGCAAAGGCTGTTCGAGGCCGTCTGGCGGGACGCCGACGCCCCCTCTCCCCCTCCCCCTCCCCC TCCCCCCGCCGAAGAACCCGCCGCTTTCAAGGAAACGCCTTGA
Upstream 100 bases:
>100_bases TCAGTGGCCTTCGTGGCGAAGACGGCTTTACTCTGGGGCGACACAGCCAAAAGACGGTCAGCGCCCCGGCGCGCCGCCCT CCGGAGAAGATCCTGTCGCC
Downstream 100 bases:
>100_bases TCCTCAAGGCGATAGCCTTTGGCCGCCCCCCTCTCGCCCTTTGATTTTTCTCCCTTGACAAGACAGGGCGGGATTCCAAA ATAAGACTCGTGAACGGCCC
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGMAEEQVVYISPKARELRERAM RRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMARMILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMR GVMVGVFLFLFTVSFLVIGRKLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREKEKRAKEAEARKAAEKEAEDK AAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRLRLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACET LVAGNDLSGSAKPALLREMLGVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHTGDGIMATFPVVSQAVEAMIE VQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSVTLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVML KGIGEPQRLFEAVWRDADAPSPPPPPPPPAEEPAAFKETP
Sequences:
>Translated_680_residues MASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGMAEEQVVYISPKARELRERAM RRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMARMILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMR GVMVGVFLFLFTVSFLVIGRKLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREKEKRAKEAEARKAAEKEAEDK AAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRLRLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACET LVAGNDLSGSAKPALLREMLGVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHTGDGIMATFPVVSQAVEAMIE VQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSVTLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVML KGIGEPQRLFEAVWRDADAPSPPPPPPPPAEEPAAFKETP >Mature_679_residues ASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGMAEEQVVYISPKARELRERAMR RAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMARMILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMRG VMVGVFLFLFTVSFLVIGRKLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMGP IPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREKEKRAKEAEARKAAEKEAEDKA AAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRLRLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACETL VAGNDLSGSAKPALLREMLGVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRAP QAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHTGDGIMATFPVVSQAVEAMIEV QKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSVTLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVMLK GIGEPQRLFEAVWRDADAPSPPPPPPPPAEEPAAFKETP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 73569; Mature: 73438
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGM CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC AEEQVVYISPKARELRERAMRRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMAR CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHCCCCCCHHHHHHHHH MILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMRGVMVGVFLFLFTVSFLVIGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG HHCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCC PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREK CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH EKRAKEAEARKAAEKEAEDKAAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACETLVAGNDLSGSAKPALLREML HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH GVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHCC PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHT CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GDGIMATFPVVSQAVEAMIEVQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH TLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVMLKGIGEPQRLFEAVWRDADAP HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC SPPPPPPPPAEEPAAFKETP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGM CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC AEEQVVYISPKARELRERAMRRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMAR CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHCCCCCCHHHHHHHHH MILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMRGVMVGVFLFLFTVSFLVIGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG HHCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCC PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREK CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH EKRAKEAEARKAAEKEAEDKAAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACETLVAGNDLSGSAKPALLREML HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH GVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHCC PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHT CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GDGIMATFPVVSQAVEAMIEVQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH TLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVMLKGIGEPQRLFEAVWRDADAP HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC SPPPPPPPPAEEPAAFKETP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]