Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is cya3 [H]

Identifier: 83592407

GI number: 83592407

Start: 1260786

End: 1262828

Strand: Reverse

Name: cya3 [H]

Synonym: Rru_A1071

Alternate gene names: 83592407

Gene position: 1262828-1260786 (Counterclockwise)

Preceding gene: 83592408

Following gene: 83592406

Centisome position: 29.01

GC content: 67.99

Gene sequence:

>2043_bases
ATGGCCTCTATGACCCACTACGAGGTTTACCTGATGGAGCTGCGCGGCGATTGGTCGCTGCAGCAGCGCTACGTCAGCAG
CGAGCGCCAGGAGGCGATCGACGAAGCCAAGCGCTTGGAAGCCGAGCTTAATCTGCCGACCAAGGTGGTGCGCGAGCTGT
TCAATCCGCAAAGCGGCATGGCCGAGGAACAGGTCGTTTACATCAGCCCCAAGGCCCGGGAACTGCGCGAGCGCGCGATG
CGCCGGGCCGGACCGCACGCCGCCGGCGGCGGTCCCGACTCGTGGGTCAGCTCCCGGGGCGAGAAGGCGAAGGCCAAGGG
CAAAGCCCCCGCCACCTCGCTCAGCGACCTGATGGCCCGCATGATTCTGGTGGTGACGGCCAGCCTGATCCTGGCGGGCA
TCGGCGGTTGGTTGGCCCCCTCGCTGCTGTCGGCCCTGAGCCTGACCACCGGCGGCGGGCCGGCCAGCGGCAATATGCGC
GGGGTGATGGTCGGGGTTTTCCTGTTCCTGTTCACGGTGAGTTTTCTGGTGATCGGCCGCAAGCTGATCCCTTACGCCGA
AATCCTGTCGCGGCCGAAGAAGACCAAGCCGATCGAGGAGGCGATCGGCCAGCGCCCCGATATGGCGCCCGGCGCCCACC
TTGCCCCGCCGCCCAAGGCCGCAACGAGCGAAGAGGCGCTGTCGAGCATCGATCCGGTCGCCTTGATGGAGGATATGGGG
CCGATCCCGGTTCCGCCGCCGCCAACCGAGCCCGAGCAAAAGATCCCCGCGGCCCAGTCGCGCAAGGCCCGGAAGAAAGC
CGCCGAGGCCCGCGCCGCCGAGGAGGAGGCCGAGCGACGCCGGCGCGAGAACCAGGATTTCCAAGAGCACGACGCCCGCG
AGATGGCGGCGCGCGAAAAGGAAAAGCGCGCGAAAGAGGCCGAAGCGCGCAAAGCCGCCGAGAAGGAGGCCGAGGACAAA
GCCGCCGCCGAGAAGGAGGCTGAGGAAAAAGCCGCCGAACAGGCCAAGGCCGCCGAAACCCTCGCGGCCGAAGACATCGC
CTCCGAGCCCCCCGCCTCCTCGCCCGAGCAGGACCGCCTGCGGCTGACCGCCCTGAGTTTTCTGGGCGAGATGGTGGCGG
CGCTAAAGGTCAGCCATCCCCAGCTCGATGTTTATGACCGCTTCGGCATCAATCTGTTCCTGGCCGGCGCCTGCGAGACG
CTGGTGGCGGGGAACGATCTGAGCGGATCGGCCAAGCCCGCCCTGCTGCGCGAAATGCTTGGGGTGATGGGCACCCGCCC
GGCCCTGGCCCTGATGTTCTCCGACAAGCTCGATGAATATCTGATGGAGCCGCGCTACATGCAGATGCTCCAGGCCGGAC
GCCAGGCCATGGGGATGAAGCTGGCGGGCGGTGGGGAGCCCTTCGCCCCCCTGCCGCAGTTGATGGCCGACTGGCGCGCC
CCCCAGGCCGCCCGGCCGGCGACGGCGAGCACGGTGGCCATCGTCTTTACCGATATGGTCGGCTCGACCGATATCAACGC
CCGCTTCGGCGACCGCCACAGTCACGAGATCACCCGCGTTCATAACGCCATCGTCCGCGCCGCGCTGGGCCGTTTCGACG
GCCGCGAGGTCAAACATACGGGTGATGGCATCATGGCCACCTTCCCCGTGGTCTCCCAGGCGGTCGAGGCGATGATCGAG
GTGCAAAAGGCCCTGGCCGAACACAACCGCATCGCCCCCGACCTGCGCCTTGATTTGCGCGTCGGCATCAATGCCGGCGA
GCCTTTGGTCGACGAGAACGACTACCACGGCCTGTCGGTCACCCTGGCCGCCCGCCTCTGCGCCCAGGCCCAAGGCGGCG
AGGTGCTGTGCTCGGGCGTGGTCCGCGACCTCGCCCAGGGCAAGGATCTGACCTTCCGCGATCGCGGTCAGGTCATGCTC
AAGGGCATCGGCGAACCGCAAAGGCTGTTCGAGGCCGTCTGGCGGGACGCCGACGCCCCCTCTCCCCCTCCCCCTCCCCC
TCCCCCCGCCGAAGAACCCGCCGCTTTCAAGGAAACGCCTTGA

Upstream 100 bases:

>100_bases
TCAGTGGCCTTCGTGGCGAAGACGGCTTTACTCTGGGGCGACACAGCCAAAAGACGGTCAGCGCCCCGGCGCGCCGCCCT
CCGGAGAAGATCCTGTCGCC

Downstream 100 bases:

>100_bases
TCCTCAAGGCGATAGCCTTTGGCCGCCCCCCTCTCGCCCTTTGATTTTTCTCCCTTGACAAGACAGGGCGGGATTCCAAA
ATAAGACTCGTGAACGGCCC

Product: adenylate/guanylate cyclase

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGMAEEQVVYISPKARELRERAM
RRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMARMILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMR
GVMVGVFLFLFTVSFLVIGRKLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG
PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREKEKRAKEAEARKAAEKEAEDK
AAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRLRLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACET
LVAGNDLSGSAKPALLREMLGVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA
PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHTGDGIMATFPVVSQAVEAMIE
VQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSVTLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVML
KGIGEPQRLFEAVWRDADAPSPPPPPPPPAEEPAAFKETP

Sequences:

>Translated_680_residues
MASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGMAEEQVVYISPKARELRERAM
RRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMARMILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMR
GVMVGVFLFLFTVSFLVIGRKLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG
PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREKEKRAKEAEARKAAEKEAEDK
AAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRLRLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACET
LVAGNDLSGSAKPALLREMLGVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA
PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHTGDGIMATFPVVSQAVEAMIE
VQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSVTLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVML
KGIGEPQRLFEAVWRDADAPSPPPPPPPPAEEPAAFKETP
>Mature_679_residues
ASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGMAEEQVVYISPKARELRERAMR
RAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMARMILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMRG
VMVGVFLFLFTVSFLVIGRKLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMGP
IPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREKEKRAKEAEARKAAEKEAEDKA
AAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRLRLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACETL
VAGNDLSGSAKPALLREMLGVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRAP
QAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHTGDGIMATFPVVSQAVEAMIEV
QKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSVTLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVMLK
GIGEPQRLFEAVWRDADAPSPPPPPPPPAEEPAAFKETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 73569; Mature: 73438

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50125 GUANYLATE_CYCLASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGM
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
AEEQVVYISPKARELRERAMRRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMAR
CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHCCCCCCHHHHHHHHH
MILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMRGVMVGVFLFLFTVSFLVIGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG
HHCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCC
PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREK
CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EKRAKEAEARKAAEKEAEDKAAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACETLVAGNDLSGSAKPALLREML
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH
GVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA
HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHCC
PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHT
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GDGIMATFPVVSQAVEAMIEVQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
TLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVMLKGIGEPQRLFEAVWRDADAP
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC
SPPPPPPPPAEEPAAFKETP
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASMTHYEVYLMELRGDWSLQQRYVSSERQEAIDEAKRLEAELNLPTKVVRELFNPQSGM
CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
AEEQVVYISPKARELRERAMRRAGPHAAGGGPDSWVSSRGEKAKAKGKAPATSLSDLMAR
CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHCCCCCCHHHHHHHHH
MILVVTASLILAGIGGWLAPSLLSALSLTTGGGPASGNMRGVMVGVFLFLFTVSFLVIGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KLIPYAEILSRPKKTKPIEEAIGQRPDMAPGAHLAPPPKAATSEEALSSIDPVALMEDMG
HHCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCC
PIPVPPPPTEPEQKIPAAQSRKARKKAAEARAAEEEAERRRRENQDFQEHDAREMAAREK
CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EKRAKEAEARKAAEKEAEDKAAAEKEAEEKAAEQAKAAETLAAEDIASEPPASSPEQDRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RLTALSFLGEMVAALKVSHPQLDVYDRFGINLFLAGACETLVAGNDLSGSAKPALLREML
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH
GVMGTRPALALMFSDKLDEYLMEPRYMQMLQAGRQAMGMKLAGGGEPFAPLPQLMADWRA
HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHCC
PQAARPATASTVAIVFTDMVGSTDINARFGDRHSHEITRVHNAIVRAALGRFDGREVKHT
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GDGIMATFPVVSQAVEAMIEVQKALAEHNRIAPDLRLDLRVGINAGEPLVDENDYHGLSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
TLAARLCAQAQGGEVLCSGVVRDLAQGKDLTFRDRGQVMLKGIGEPQRLFEAVWRDADAP
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC
SPPPPPPPPAEEPAAFKETP
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]