| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592343
Identifier: 83592343
GI number: 83592343
Start: 1194391
End: 1194822
Strand: Reverse
Name: 83592343
Synonym: Rru_A1007
Alternate gene names: NA
Gene position: 1194822-1194391 (Counterclockwise)
Preceding gene: 83592344
Following gene: 83592340
Centisome position: 27.45
GC content: 67.36
Gene sequence:
>432_bases ATGGCCGATGTGCTGTTTTTCGAAAAACCCGGCTGCCGCAACAACACCCGCCAGAAGGCCCTGCTGATCGCCTCGGGCCA CCGGGTCGAAGCCCACGACATCCGCCAACAGCCGTGGACGGCCGAAACCTTGCGCCCCTATTTCGGCGACAAACCGGTGG CGCAATGGATCAACCCGGCCGCGCCGCGCGTCAAGGCCGGCGAGGTAAGGCCCGAGGCTCTGGACGAGAGCGAAGCCCTG GCCTTGATGGTCAAGGACGCCTTGCTGATCCGCCGGCCGCTAATGGCCGTCGGCCAAACCAAAACCTGCGGCTTCGACCG CGCCGCCGTCAACGCCTGGATCGGCCTGATCGCCCAAGACCCCGGCGACATCGAAACCTGCCCCTCGCAGGCGACCAACC ACCGGTGCGCCGAAGAGCCCGGCGCGGCGTGA
Upstream 100 bases:
>100_bases AGCTTGATATGAAGGTGGAACGCGAGATCCGCCGTCAGGTCGACGCCCTGCTGGCGCTTGCCGGCCTGGACTGACCTTCC CTTTGCAAGGACGCGCCGCC
Downstream 100 bases:
>100_bases CGGCGCCTTCCCCGCCGGCGACCGCGCCGAAAATCGCCATCCCGTTTTCCGCTCGCCGTTTCAGGGACGCGCCGACAGAC GGGGGCGAAAAGACACCTTG
Product: nitrogenase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MADVLFFEKPGCRNNTRQKALLIASGHRVEAHDIRQQPWTAETLRPYFGDKPVAQWINPAAPRVKAGEVRPEALDESEAL ALMVKDALLIRRPLMAVGQTKTCGFDRAAVNAWIGLIAQDPGDIETCPSQATNHRCAEEPGAA
Sequences:
>Translated_143_residues MADVLFFEKPGCRNNTRQKALLIASGHRVEAHDIRQQPWTAETLRPYFGDKPVAQWINPAAPRVKAGEVRPEALDESEAL ALMVKDALLIRRPLMAVGQTKTCGFDRAAVNAWIGLIAQDPGDIETCPSQATNHRCAEEPGAA >Mature_142_residues ADVLFFEKPGCRNNTRQKALLIASGHRVEAHDIRQQPWTAETLRPYFGDKPVAQWINPAAPRVKAGEVRPEALDESEALA LMVKDALLIRRPLMAVGQTKTCGFDRAAVNAWIGLIAQDPGDIETCPSQATNHRCAEEPGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YDRA_RHORU (P14301)
Other databases:
- EMBL: X16187 - PIR: JQ0446 - ProteinModelPortal: P14301 - SMR: P14301 - InterPro: IPR006660 - InterPro: IPR006503 - InterPro: IPR012336 - InterPro: IPR012335 - Gene3D: G3DSA:3.40.30.10 - TIGRFAMs: TIGR01616
Pfam domain/function: PF03960 ArsC; SSF52833 Thiordxn-like_fd
EC number: NA
Molecular weight: Translated: 15657; Mature: 15526
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS51353 ARSC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVLFFEKPGCRNNTRQKALLIASGHRVEAHDIRQQPWTAETLRPYFGDKPVAQWINPA CCCCEEEECCCCCCCCCCEEEEEECCCEECHHHHCCCCCCHHHHCCCCCCCCHHHHCCCC APRVKAGEVRPEALDESEALALMVKDALLIRRPLMAVGQTKTCGFDRAAVNAWIGLIAQD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC PGDIETCPSQATNHRCAEEPGAA CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADVLFFEKPGCRNNTRQKALLIASGHRVEAHDIRQQPWTAETLRPYFGDKPVAQWINPA CCCEEEECCCCCCCCCCEEEEEECCCEECHHHHCCCCCCHHHHCCCCCCCCHHHHCCCC APRVKAGEVRPEALDESEALALMVKDALLIRRPLMAVGQTKTCGFDRAAVNAWIGLIAQD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC PGDIETCPSQATNHRCAEEPGAA CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2506427