| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592324
Identifier: 83592324
GI number: 83592324
Start: 1175151
End: 1175369
Strand: Reverse
Name: 83592324
Synonym: Rru_A0988
Alternate gene names: NA
Gene position: 1175369-1175151 (Counterclockwise)
Preceding gene: 83592325
Following gene: 83592313
Centisome position: 27.0
GC content: 69.86
Gene sequence:
>219_bases ATGCCCCGCGTTCTTGCCCTTCTTACCCTAACCGGCGCGCTTTTCGTCGGCGGATGCTCGAACCTGTCGCCCACCCAGCA ACGGATGTTGACGGGTGGGGCGATCGGCACCGGGGTGGGCGCCGTCGGCACGGCGCTGACCGGCGGCTGCGTGGCCTGTG GCGCGGCCATCGGCGGCGCCGTTGGCGTCGGCGCCGGCTATGTGGTCGACAAGATGTAA
Upstream 100 bases:
>100_bases TCCAATACCGCAACCCTTTTCCCGATCGCGCGTTCTTTCGCCGTCCGCCCTCACGGCGGATAGCGATAGATCCCCGGCGT CGCAGACCAGGAGACATTCC
Downstream 100 bases:
>100_bases GGCGGCAAGGCCACTTTTTGCCGTTAGCTGAAGGGACAGGCGCGGAAGGCCGGCAGGGCCTCGGCCCGGGCGGAAAGCGC CGTCAGCTTCGGGGTGTCGG
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPRVLALLTLTGALFVGGCSNLSPTQQRMLTGGAIGTGVGAVGTALTGGCVACGAAIGGAVGVGAGYVVDKM
Sequences:
>Translated_72_residues MPRVLALLTLTGALFVGGCSNLSPTQQRMLTGGAIGTGVGAVGTALTGGCVACGAAIGGAVGVGAGYVVDKM >Mature_71_residues PRVLALLTLTGALFVGGCSNLSPTQQRMLTGGAIGTGVGAVGTALTGGCVACGAAIGGAVGVGAGYVVDKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6738; Mature: 6607
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVLALLTLTGALFVGGCSNLSPTQQRMLTGGAIGTGVGAVGTALTGGCVACGAAIGGA CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHCCH VGVGAGYVVDKM HCCCCCEEECCC >Mature Secondary Structure PRVLALLTLTGALFVGGCSNLSPTQQRMLTGGAIGTGVGAVGTALTGGCVACGAAIGGA CHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHCCH VGVGAGYVVDKM HCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA