| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592293
Identifier: 83592293
GI number: 83592293
Start: 1143212
End: 1143682
Strand: Reverse
Name: 83592293
Synonym: Rru_A0957
Alternate gene names: NA
Gene position: 1143682-1143212 (Counterclockwise)
Preceding gene: 83592294
Following gene: 83592292
Centisome position: 26.27
GC content: 68.79
Gene sequence:
>471_bases ATGATCCGCCCCATCCACATCATCTGGGCCGCGTTGATCATGGGCATCGGCACCGCGCTGTTCATGGTCGCCTATGAGGT CGATGCCAAGGAAAAGGAACTGGCCCGCCTCCATGCCGATATCCGCCGGACCACCGAGAGCATGCATGTGCTGCGCGCCG AGTGGAGCTTCCTGAACGATCCGACCCGCCTGGACCGCCTGGCGACCGATCATCTTGGGCTTCAGCCGATCCGCCCCGAG CAGTATGTGACCGTGGCCAGCTTGCCCAACCGTCCCGCCCCCCTGCCCGCGCCCGCGCCAAAGACCGAGCCGCCGGCCCC GGGCAACGTGCCGATGGCCTCGCTTCCCAACGGCGCGACGACGGTGTCGGGACAGGCCCGCGCCGCCGGCGGCGGCCGGG TCACCGTCACCCCCGTGCCCACGGTCAAACCGATCCTGACCAAGCTTGCCAAAGCGGGCGGCGGGCAATGA
Upstream 100 bases:
>100_bases ACGCCGAGACCCGGGTCAACCCGCGGTCCCGCTCGGCCCGGCTGCGCGCCGTCGAACGCACCGAATTTCCCGCCTGGACG GTTTCCCCCGGAGGTCAGCG
Downstream 100 bases:
>100_bases TCGCCCTGCTCAAAAATCGGCGGGAAAAACGCTTCGTCTATCCGGGGGCGGAAATCCGCTTCGACCGCACGGCCGAGCGG GGCCGGGGAGCCGATCTGGA
Product: secreted (periplasmic) protein-like
Products: NA
Alternate protein names: Secreted Protein-Like; Periplasmic Protein; Protein nB
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MIRPIHIIWAALIMGIGTALFMVAYEVDAKEKELARLHADIRRTTESMHVLRAEWSFLNDPTRLDRLATDHLGLQPIRPE QYVTVASLPNRPAPLPAPAPKTEPPAPGNVPMASLPNGATTVSGQARAAGGGRVTVTPVPTVKPILTKLAKAGGGQ
Sequences:
>Translated_156_residues MIRPIHIIWAALIMGIGTALFMVAYEVDAKEKELARLHADIRRTTESMHVLRAEWSFLNDPTRLDRLATDHLGLQPIRPE QYVTVASLPNRPAPLPAPAPKTEPPAPGNVPMASLPNGATTVSGQARAAGGGRVTVTPVPTVKPILTKLAKAGGGQ >Mature_156_residues MIRPIHIIWAALIMGIGTALFMVAYEVDAKEKELARLHADIRRTTESMHVLRAEWSFLNDPTRLDRLATDHLGLQPIRPE QYVTVASLPNRPAPLPAPAPKTEPPAPGNVPMASLPNGATTVSGQARAAGGGRVTVTPVPTVKPILTKLAKAGGGQ
Specific function: Unknown
COG id: COG5462
COG function: function code S; Predicted secreted (periplasmic) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16633; Mature: 16633
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPIHIIWAALIMGIGTALFMVAYEVDAKEKELARLHADIRRTTESMHVLRAEWSFLND CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTRLDRLATDHLGLQPIRPEQYVTVASLPNRPAPLPAPAPKTEPPAPGNVPMASLPNGAT HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TVSGQARAAGGGRVTVTPVPTVKPILTKLAKAGGGQ ECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MIRPIHIIWAALIMGIGTALFMVAYEVDAKEKELARLHADIRRTTESMHVLRAEWSFLND CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTRLDRLATDHLGLQPIRPEQYVTVASLPNRPAPLPAPAPKTEPPAPGNVPMASLPNGAT HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TVSGQARAAGGGRVTVTPVPTVKPILTKLAKAGGGQ ECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA