| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592237
Identifier: 83592237
GI number: 83592237
Start: 1075898
End: 1077058
Strand: Reverse
Name: 83592237
Synonym: Rru_A0901
Alternate gene names: NA
Gene position: 1077058-1075898 (Counterclockwise)
Preceding gene: 83592257
Following gene: 83592236
Centisome position: 24.74
GC content: 68.73
Gene sequence:
>1161_bases ATGACGTTCATCGACAGTCCCCTCTCGCAGACGATCGCCCTGGCGGGGGGCGACCTTCATGTCGCGGTGGCGCGCAGCGA TCTTCCCCTGGGCGCGCTCTGCGGCTTCGCCAGCCGGCGCAACCCCAAGCGCCCCTTCCTGTTCGTCAGCAAGGTGCTGG GGCGGCATCTGCCCGTCCGCCCCCAGGTGATGAGGATGGTTCACCGCCGGCTGGCGGCGAAGCTGCCGGCAAATCTTCCC GGACCGGTCGTCGCCATCGGCATGGCCGAAACCGCCATCTGCCTGGGACAGGGGGTTTTCGAAGCGTGGCGGGGGGGAAG CGGCCGCGAGGACGGGCTGTTCATCCATTCGACCCGCTACCGGCTGCGTCAGGGGTTGCTGTCGACCTTCGAGGAAAGCC ACAGCCACGCCACCAGCCACCTGATCCACCAGCCCGCCGCCGCCCTTGATCGCGCCCTCTGCGCCGCCTGCCGGACCCTG GTGCTCGTCGATGACGAAGCCTCGACCGGTGCGACCTTCGTCGCCCTAGTCGAAGCCAATCGCGCCGCGATGCCCAACCT CGCCCGGATCGTCTGCGTCACCATCACCGACTGGATGGGCGCGGCGAAGCGGGCCGAGATCACGGCGGCCATGCCGGTGC CCACGACCTTCGTCTCCCTTCTGGAAGGCGGCTATACCTTCGAGGCGCGCACCGTCACCCCGCCGGCCATGCCCAATGTC ACCGGCGACGGCGCCTTCAAGGACGATCTGATCCCGGTGAACTGGGGGCGCCTTGGCTTGCGCCGCCCCCGGCCGCTACC CGCCGCCGCCCTGGCGATCAGGGCGAAGGCCGGCGAGCGGGTTCTGGTGCTGGGCACCGGCGAATTCGTCTTTCCGCCCT TTCAGCTCGCCCGCCGGCTGTCGGCGATGGGCGCCGATGTCCGGGTGCAGGCGACCACCCGCTCGCCGATCCTGGAAGGC GGCGATATCGACGGCGTGATCGACTTCGCCGACGCCTATGGCGACGGCATTCCCAATTTTCTGTATTCCACCCGTCCGGG AGACTACGACCGCGTTCTGGTCTGCTACGAGACGCCACCATCGACCGCCCAAACGGCCCTGATCGCCGCCCTGGGCGCCG AACCGGTTTTTTTCAATGCCATCGGGGGCCCGCGGACATGA
Upstream 100 bases:
>100_bases ATCGCCTATCGCAATAAAACCGTCTCCTTTCGAGATCAAAGATCTGCCCTCATCCCTTTTGCCAAAGCGATCCCGCCGAA GATCGTTGGAGCCACGCCCC
Downstream 100 bases:
>100_bases GGCGCGTTGTTTTCGTCGATCTCGACGACACCTTGTTCCAGACGGCGCGCAAAAACCCGGGCGCCCAAACCCTGGCGGCG CTCGACAAGGACGGCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTFIDSPLSQTIALAGGDLHVAVARSDLPLGALCGFASRRNPKRPFLFVSKVLGRHLPVRPQVMRMVHRRLAAKLPANLP GPVVAIGMAETAICLGQGVFEAWRGGSGREDGLFIHSTRYRLRQGLLSTFEESHSHATSHLIHQPAAALDRALCAACRTL VLVDDEASTGATFVALVEANRAAMPNLARIVCVTITDWMGAAKRAEITAAMPVPTTFVSLLEGGYTFEARTVTPPAMPNV TGDGAFKDDLIPVNWGRLGLRRPRPLPAAALAIRAKAGERVLVLGTGEFVFPPFQLARRLSAMGADVRVQATTRSPILEG GDIDGVIDFADAYGDGIPNFLYSTRPGDYDRVLVCYETPPSTAQTALIAALGAEPVFFNAIGGPRT
Sequences:
>Translated_386_residues MTFIDSPLSQTIALAGGDLHVAVARSDLPLGALCGFASRRNPKRPFLFVSKVLGRHLPVRPQVMRMVHRRLAAKLPANLP GPVVAIGMAETAICLGQGVFEAWRGGSGREDGLFIHSTRYRLRQGLLSTFEESHSHATSHLIHQPAAALDRALCAACRTL VLVDDEASTGATFVALVEANRAAMPNLARIVCVTITDWMGAAKRAEITAAMPVPTTFVSLLEGGYTFEARTVTPPAMPNV TGDGAFKDDLIPVNWGRLGLRRPRPLPAAALAIRAKAGERVLVLGTGEFVFPPFQLARRLSAMGADVRVQATTRSPILEG GDIDGVIDFADAYGDGIPNFLYSTRPGDYDRVLVCYETPPSTAQTALIAALGAEPVFFNAIGGPRT >Mature_385_residues TFIDSPLSQTIALAGGDLHVAVARSDLPLGALCGFASRRNPKRPFLFVSKVLGRHLPVRPQVMRMVHRRLAAKLPANLPG PVVAIGMAETAICLGQGVFEAWRGGSGREDGLFIHSTRYRLRQGLLSTFEESHSHATSHLIHQPAAALDRALCAACRTLV LVDDEASTGATFVALVEANRAAMPNLARIVCVTITDWMGAAKRAEITAAMPVPTTFVSLLEGGYTFEARTVTPPAMPNVT GDGAFKDDLIPVNWGRLGLRRPRPLPAAALAIRAKAGERVLVLGTGEFVFPPFQLARRLSAMGADVRVQATTRSPILEGG DIDGVIDFADAYGDGIPNFLYSTRPGDYDRVLVCYETPPSTAQTALIAALGAEPVFFNAIGGPRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41200; Mature: 41069
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFIDSPLSQTIALAGGDLHVAVARSDLPLGALCGFASRRNPKRPFLFVSKVLGRHLPVR CCCCCCCHHHHEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC PQVMRMVHRRLAAKLPANLPGPVVAIGMAETAICLGQGVFEAWRGGSGREDGLFIHSTRY HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH RLRQGLLSTFEESHSHATSHLIHQPAAALDRALCAACRTLVLVDDEASTGATFVALVEAN HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEEECC RAAMPNLARIVCVTITDWMGAAKRAEITAAMPVPTTFVSLLEGGYTFEARTVTPPAMPNV CCCCCCCCEEEEEEEHHHHCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCC TGDGAFKDDLIPVNWGRLGLRRPRPLPAAALAIRAKAGERVLVLGTGEFVFPPFQLARRL CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCEECCHHHHHHHH SAMGADVRVQATTRSPILEGGDIDGVIDFADAYGDGIPNFLYSTRPGDYDRVLVCYETPP HHCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHCCCCCCHHCCCCCCCCCEEEEEEECCC STAQTALIAALGAEPVFFNAIGGPRT CHHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure TFIDSPLSQTIALAGGDLHVAVARSDLPLGALCGFASRRNPKRPFLFVSKVLGRHLPVR CCCCCCHHHHEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC PQVMRMVHRRLAAKLPANLPGPVVAIGMAETAICLGQGVFEAWRGGSGREDGLFIHSTRY HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH RLRQGLLSTFEESHSHATSHLIHQPAAALDRALCAACRTLVLVDDEASTGATFVALVEAN HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEEECC RAAMPNLARIVCVTITDWMGAAKRAEITAAMPVPTTFVSLLEGGYTFEARTVTPPAMPNV CCCCCCCCEEEEEEEHHHHCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCC TGDGAFKDDLIPVNWGRLGLRRPRPLPAAALAIRAKAGERVLVLGTGEFVFPPFQLARRL CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCEECCHHHHHHHH SAMGADVRVQATTRSPILEGGDIDGVIDFADAYGDGIPNFLYSTRPGDYDRVLVCYETPP HHCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHCCCCCCHHCCCCCCCCCEEEEEEECCC STAQTALIAALGAEPVFFNAIGGPRT CHHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA