| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592235
Identifier: 83592235
GI number: 83592235
Start: 1074046
End: 1075140
Strand: Reverse
Name: 83592235
Synonym: Rru_A0899
Alternate gene names: NA
Gene position: 1075140-1074046 (Counterclockwise)
Preceding gene: 83592236
Following gene: 83592234
Centisome position: 24.7
GC content: 66.3
Gene sequence:
>1095_bases ATGAGCGCCTTTCCCCTCGGCTTCAGCGGCAGCTACGACCCCGCCGACGTGACCTTCCTGTTGACCCCGGTGGTCGTCGA TTTCGTCGATGTCGCCGCCAAGGAAGCCCTGATCCAAAGCGGCCGCAAGCACTACTCCGAGATGCTCGCCCGCGAAAAGC CGCCCTCGCCCGAGTATATGGCCGTTTTCCATCAGGCCTTCGCCGCCAATCGCGATCGCGTCGGCCGCGACGTGGCCCGT CTGGCCAAGGCCCTGGCGGCGCGCGGCGAGGACGGCGAGATCGTTCTTGTCAGTCTGGCGCGCGCCGGCACCCCGATCGG CGTGCTGCTGCGCCGCGCCCTCGTCGCCCTTGGGCGGATGGCCGTTCATTACTCGGTCTCGATCATCCGCGACCGGGGCA TCGATCCGCTGGCGATGGCGGCGATCCTTGCCCGCCATGATCCGGCGTCGATCGTCTTCGTCGATGGCTGGACCGGCAAG GGGGCGATCGGTGGCGAGCTGGCGCGGGCGATGGCCGGCGACTTCCCCCAATTGACCGGCGCGCCGCTATGCGTCTTGTC GGATCTGGCCGGCGTCGCCACCCTCGCGGCGGGGGACGAGGATTACGTCATCCCCTCGGCGATCCTCAACGGCATCATCT CCGGGCTGATCAGCCGCACGGTTTTGTCAGACGATCTTATCGCGCCGGGGAACTTCCATGGGTGCATGCTCCTTGATGAT CTGGCGGATCTGGATTTGAGCCGATGGTATGTGGATGAGCAAATGAACGACGTGCGCGATCACCTTCCACGGGCGAGGGC CGCCGATTGGAGCGCGACGGACCGCGCGCGCGCGGCCGCCATCTCGACCGCCTTCGTCGAAGCCATGATGCAAAGGACGG GGATCACCGATAGAAACCGCGTCAAGCCGGGCATCGGAGAAGCCACCCGCGCCCTGCTTCGCCGCATGCCCGAACGGCTG TTCCTGCGCGATCCCCAAGACGGCGATGTCGGCCACCTGGTGGCTTTGGCGTCAAGCAAGGGCATCGCCGTGGAGACCCT GGCCGATCTTCCCTATAGCGCCTGCGCCATTATCAAGACCCTGGGTGACGCATGA
Upstream 100 bases:
>100_bases TGTCCTTGTGCGATTACGCCCTCACCCCGTCGCGCTCGCAGATCCTGGGTTTTTTGAACACGACCTGGCCGGCCGTCGCG GCGATGGCGGACAGCGCGGC
Downstream 100 bases:
>100_bases CCGAACAGATCTCCGCCTTGCGGCTTGGCGCCAGCCTTTATGTGCCGGCCACCCGCTCCGACCTCGCGGCCATCGCCAAT GGCCATCGCCATCCCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSAFPLGFSGSYDPADVTFLLTPVVVDFVDVAAKEALIQSGRKHYSEMLAREKPPSPEYMAVFHQAFAANRDRVGRDVAR LAKALAARGEDGEIVLVSLARAGTPIGVLLRRALVALGRMAVHYSVSIIRDRGIDPLAMAAILARHDPASIVFVDGWTGK GAIGGELARAMAGDFPQLTGAPLCVLSDLAGVATLAAGDEDYVIPSAILNGIISGLISRTVLSDDLIAPGNFHGCMLLDD LADLDLSRWYVDEQMNDVRDHLPRARAADWSATDRARAAAISTAFVEAMMQRTGITDRNRVKPGIGEATRALLRRMPERL FLRDPQDGDVGHLVALASSKGIAVETLADLPYSACAIIKTLGDA
Sequences:
>Translated_364_residues MSAFPLGFSGSYDPADVTFLLTPVVVDFVDVAAKEALIQSGRKHYSEMLAREKPPSPEYMAVFHQAFAANRDRVGRDVAR LAKALAARGEDGEIVLVSLARAGTPIGVLLRRALVALGRMAVHYSVSIIRDRGIDPLAMAAILARHDPASIVFVDGWTGK GAIGGELARAMAGDFPQLTGAPLCVLSDLAGVATLAAGDEDYVIPSAILNGIISGLISRTVLSDDLIAPGNFHGCMLLDD LADLDLSRWYVDEQMNDVRDHLPRARAADWSATDRARAAAISTAFVEAMMQRTGITDRNRVKPGIGEATRALLRRMPERL FLRDPQDGDVGHLVALASSKGIAVETLADLPYSACAIIKTLGDA >Mature_363_residues SAFPLGFSGSYDPADVTFLLTPVVVDFVDVAAKEALIQSGRKHYSEMLAREKPPSPEYMAVFHQAFAANRDRVGRDVARL AKALAARGEDGEIVLVSLARAGTPIGVLLRRALVALGRMAVHYSVSIIRDRGIDPLAMAAILARHDPASIVFVDGWTGKG AIGGELARAMAGDFPQLTGAPLCVLSDLAGVATLAAGDEDYVIPSAILNGIISGLISRTVLSDDLIAPGNFHGCMLLDDL ADLDLSRWYVDEQMNDVRDHLPRARAADWSATDRARAAAISTAFVEAMMQRTGITDRNRVKPGIGEATRALLRRMPERLF LRDPQDGDVGHLVALASSKGIAVETLADLPYSACAIIKTLGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38825; Mature: 38694
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFPLGFSGSYDPADVTFLLTPVVVDFVDVAAKEALIQSGRKHYSEMLAREKPPSPEYM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AVFHQAFAANRDRVGRDVARLAKALAARGEDGEIVLVSLARAGTPIGVLLRRALVALGRM HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH AVHYSVSIIRDRGIDPLAMAAILARHDPASIVFVDGWTGKGAIGGELARAMAGDFPQLTG HHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC APLCVLSDLAGVATLAAGDEDYVIPSAILNGIISGLISRTVLSDDLIAPGNFHGCMLLDD CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHH LADLDLSRWYVDEQMNDVRDHLPRARAADWSATDRARAAAISTAFVEAMMQRTGITDRNR HHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC VKPGIGEATRALLRRMPERLFLRDPQDGDVGHLVALASSKGIAVETLADLPYSACAIIKT CCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHEEEEECCCCCCHHHHHHCCHHHHHHHHH LGDA HCCC >Mature Secondary Structure SAFPLGFSGSYDPADVTFLLTPVVVDFVDVAAKEALIQSGRKHYSEMLAREKPPSPEYM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AVFHQAFAANRDRVGRDVARLAKALAARGEDGEIVLVSLARAGTPIGVLLRRALVALGRM HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH AVHYSVSIIRDRGIDPLAMAAILARHDPASIVFVDGWTGKGAIGGELARAMAGDFPQLTG HHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC APLCVLSDLAGVATLAAGDEDYVIPSAILNGIISGLISRTVLSDDLIAPGNFHGCMLLDD CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHH LADLDLSRWYVDEQMNDVRDHLPRARAADWSATDRARAAAISTAFVEAMMQRTGITDRNR HHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC VKPGIGEATRALLRRMPERLFLRDPQDGDVGHLVALASSKGIAVETLADLPYSACAIIKT CCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHEEEEECCCCCCHHHHHHCCHHHHHHHHH LGDA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA