| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592234
Identifier: 83592234
GI number: 83592234
Start: 1073120
End: 1074049
Strand: Reverse
Name: 83592234
Synonym: Rru_A0898
Alternate gene names: NA
Gene position: 1074049-1073120 (Counterclockwise)
Preceding gene: 83592235
Following gene: 83592231
Centisome position: 24.67
GC content: 65.81
Gene sequence:
>930_bases ATGACCGAACAGATCTCCGCCTTGCGGCTTGGCGCCAGCCTTTATGTGCCGGCCACCCGCTCCGACCTCGCGGCCATCGC CAATGGCCATCGCCATCCCTTCTTGAAATCGGTGATCCTGTGCACCGAGGACAGCATCCTGGCCGAACAGGTCGATGCCG CCCTGGTCAATCTGGCCGAATGCCTGACCAAATTGGAGGACGGCCGCCCCCTGGTGTTCATCCGCCCGCGCAATATCGAG GTGCTGGGTAGGATCCTGGCGATGAAGGGGATCGAGCGGATCGACGGCTTCGTCCTGCCCAAGACCACGCCGGACTCGAT GATCGCCTGCGCCACCCTGGTGCCGCCCCGCTTCATGCTGATGCCGACCCTGGAGACCCTCGACGTATTCGACGCCACGG CCCTGCGCGATCTCAGAACCGTTCTGTCGGGCCCCGGCCTGAAGAACCGCATCCTGGCGCTGCGCATCGGCGGCAACGAC ATCCTCAATCTTCTGGGCATCCGCCGGCGCGCCGGAAAAACCATCTATGACACGGCGGCGGGTCCGGTGATGGCGGCGCT GGTGGCGGCCTTCCGCCCCTTCGGCTTCGCCCTGACCGCGCCGGTCTTCGAGGATTTCGGCGATCTCGCCACCTTGCGCG AAGAGGTCTCCCGCGACCTCGACCACGGTCTGGTCGGCAAGGCCGCCATCCATCCCTTCCAGGTCGGGCAGATCGAACGC CAGTACCGGGTCGCCGAAGAAGACCTGGAAATCGCCAACCGGGTGCTGGCCGTCGATGCCCCGGCGGTGTTCCAGGTCGA TCAGATCATGTGCGAACCCGCCACCCATTCCCAATGGGCCCGCGCCACCGTCGACCGCGCCCGGATCTATGGCGTCGAAG GCAAGGCCGACAGCCTGACCACCCTCGACAGACGCCTCGTGGCTTCGTAA
Upstream 100 bases:
>100_bases GCCACCTGGTGGCTTTGGCGTCAAGCAAGGGCATCGCCGTGGAGACCCTGGCCGATCTTCCCTATAGCGCCTGCGCCATT ATCAAGACCCTGGGTGACGC
Downstream 100 bases:
>100_bases AGGCGCTCTTTTAGCGCCAACACGAGCGCCTCACGCCTTCGCCTCGTCGTCCAGATCCAGCAGAGCCGCATCCAGGAAGC CCAGGAGATCGGTGTCGCTC
Product: ATP/GTP-binding protein
Products: NA
Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase Subunit Beta; Citrate Lyase Beta Subunit-Like
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTEQISALRLGASLYVPATRSDLAAIANGHRHPFLKSVILCTEDSILAEQVDAALVNLAECLTKLEDGRPLVFIRPRNIE VLGRILAMKGIERIDGFVLPKTTPDSMIACATLVPPRFMLMPTLETLDVFDATALRDLRTVLSGPGLKNRILALRIGGND ILNLLGIRRRAGKTIYDTAAGPVMAALVAAFRPFGFALTAPVFEDFGDLATLREEVSRDLDHGLVGKAAIHPFQVGQIER QYRVAEEDLEIANRVLAVDAPAVFQVDQIMCEPATHSQWARATVDRARIYGVEGKADSLTTLDRRLVAS
Sequences:
>Translated_309_residues MTEQISALRLGASLYVPATRSDLAAIANGHRHPFLKSVILCTEDSILAEQVDAALVNLAECLTKLEDGRPLVFIRPRNIE VLGRILAMKGIERIDGFVLPKTTPDSMIACATLVPPRFMLMPTLETLDVFDATALRDLRTVLSGPGLKNRILALRIGGND ILNLLGIRRRAGKTIYDTAAGPVMAALVAAFRPFGFALTAPVFEDFGDLATLREEVSRDLDHGLVGKAAIHPFQVGQIER QYRVAEEDLEIANRVLAVDAPAVFQVDQIMCEPATHSQWARATVDRARIYGVEGKADSLTTLDRRLVAS >Mature_308_residues TEQISALRLGASLYVPATRSDLAAIANGHRHPFLKSVILCTEDSILAEQVDAALVNLAECLTKLEDGRPLVFIRPRNIEV LGRILAMKGIERIDGFVLPKTTPDSMIACATLVPPRFMLMPTLETLDVFDATALRDLRTVLSGPGLKNRILALRIGGNDI LNLLGIRRRAGKTIYDTAAGPVMAALVAAFRPFGFALTAPVFEDFGDLATLREEVSRDLDHGLVGKAAIHPFQVGQIERQ YRVAEEDLEIANRVLAVDAPAVFQVDQIMCEPATHSQWARATVDRARIYGVEGKADSLTTLDRRLVAS
Specific function: Unknown
COG id: COG2301
COG function: function code G; Citrate lyase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33720; Mature: 33588
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQISALRLGASLYVPATRSDLAAIANGHRHPFLKSVILCTEDSILAEQVDAALVNLAE CCCCHHHHHHCCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH CLTKLEDGRPLVFIRPRNIEVLGRILAMKGIERIDGFVLPKTTPDSMIACATLVPPRFML HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCCCEE MPTLETLDVFDATALRDLRTVLSGPGLKNRILALRIGGNDILNLLGIRRRAGKTIYDTAA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEECCCC GPVMAALVAAFRPFGFALTAPVFEDFGDLATLREEVSRDLDHGLVGKAAIHPFQVGQIER HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHH QYRVAEEDLEIANRVLAVDAPAVFQVDQIMCEPATHSQWARATVDRARIYGVEGKADSLT HHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCHHH TLDRRLVAS HHHHHHHCC >Mature Secondary Structure TEQISALRLGASLYVPATRSDLAAIANGHRHPFLKSVILCTEDSILAEQVDAALVNLAE CCCHHHHHHCCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH CLTKLEDGRPLVFIRPRNIEVLGRILAMKGIERIDGFVLPKTTPDSMIACATLVPPRFML HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCCCEE MPTLETLDVFDATALRDLRTVLSGPGLKNRILALRIGGNDILNLLGIRRRAGKTIYDTAA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEECCCC GPVMAALVAAFRPFGFALTAPVFEDFGDLATLREEVSRDLDHGLVGKAAIHPFQVGQIER HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHH QYRVAEEDLEIANRVLAVDAPAVFQVDQIMCEPATHSQWARATVDRARIYGVEGKADSLT HHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCHHH TLDRRLVAS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA