| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is terC [H]
Identifier: 83592226
GI number: 83592226
Start: 1066674
End: 1067690
Strand: Reverse
Name: terC [H]
Synonym: Rru_A0890
Alternate gene names: 83592226
Gene position: 1067690-1066674 (Counterclockwise)
Preceding gene: 83592227
Following gene: 83592224
Centisome position: 24.53
GC content: 59.98
Gene sequence:
>1017_bases GTGGCCCACTTCGGCTTTCCCATCGAAACAATCATCATCTTTTTCACCGTGATCGGCTTCTCGGTCTTCATCGACCTTTT CGCCCATCGCCATGCGAAAGAGATCTCCGTTCGCGACGCCAGCTTGTGGTCGTGCTTCTGGATCGGGCTGGCCCTGGCCT TCTTTGCCTATCTGTGGCTGCGCTTCGACAAGACCTGGGCCGACCTTTATCTGGCCGGGTACGCCCTGGAAAAATCGCTG TCGATCGATAATTTGATCGTCTTCATGGCGATCTTCGCCTCGTTCGGGATCAAGGGGGTGCTTCAGCACCGTATTCTGTA CTGGGGGATCATCGGCGCCCTGGTTTTCCGCGCCATCTTCGTCGCGGTCGGCACCGGTCTGTTCGCCCTCGCCCCCTGGG TCGGCTTTATCTTCGCCGCCATCGTCGCCTGGTCGGGCTGGAAAATGCTGACCTCGGGCGGTGACAACGAGGAGATCACC GATTACTCCGAGCACTGGTCGGTCAAGATCACGGCGCGCCTGATGCCGGTGTTCCCCCGCCTTTATGCCGAGCGCTTCTT CGTCAACCGGGCGATCGTCGCCGATCTGGCGAAGTCCGATCCCACCCTCAAGCTGGCCAAGAACGCCGCCGTTTTCGCCA CCCCGGCCTTTCTTTGCCTGATGGCGATCGAAACATCGGACGTGATGTTCGCCTTTGATTCGGTGCCGGCCGTTATCGCC GTGACCCAGGAACCCCTGCTGGTTTACGCGGCGATGATCTTCGCCGTCCTTGGCCTGAGGTCGTTGTACTTCGTGCTCGC CGCGATGACCAAATACCTCGTCCACCTGGAAAAGGCGGTCATCGTCCTGCTGTTCTTCATCGCCGCCAAACTGACGCTGC AGTCGGGCGAGCATGTCTTCGGCTGGGACTTCCTCCATATCAGCCCCAACGTCAGCCTGCTGATCGTTCTGGGCACTCTG GCCGCCGGCGTGATCGCCTCGTTCATCTGGCCGGCCAAAGAAGAAAAGGCCGAGTGA
Upstream 100 bases:
>100_bases GCCCCCCGTGGCGTGCCGACCGGCGAGCCGCCCGTTTGGGCGTATTGCGGCAAGCCAATAGGGGACTTGCCGGACCTCTA TCCTGACTCAAGGATCTGTC
Downstream 100 bases:
>100_bases CGGACCCGTTCGGCCCTGTGATCGCACGGAAAAGGCCACCTTCGGGTGGCCTTTTTCATGGCAGCCCTCGGCGAGGCGGC CTTCCGTCAATCGATGCAGA
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAHFGFPIETIIIFFTVIGFSVFIDLFAHRHAKEISVRDASLWSCFWIGLALAFFAYLWLRFDKTWADLYLAGYALEKSL SIDNLIVFMAIFASFGIKGVLQHRILYWGIIGALVFRAIFVAVGTGLFALAPWVGFIFAAIVAWSGWKMLTSGGDNEEIT DYSEHWSVKITARLMPVFPRLYAERFFVNRAIVADLAKSDPTLKLAKNAAVFATPAFLCLMAIETSDVMFAFDSVPAVIA VTQEPLLVYAAMIFAVLGLRSLYFVLAAMTKYLVHLEKAVIVLLFFIAAKLTLQSGEHVFGWDFLHISPNVSLLIVLGTL AAGVIASFIWPAKEEKAE
Sequences:
>Translated_338_residues MAHFGFPIETIIIFFTVIGFSVFIDLFAHRHAKEISVRDASLWSCFWIGLALAFFAYLWLRFDKTWADLYLAGYALEKSL SIDNLIVFMAIFASFGIKGVLQHRILYWGIIGALVFRAIFVAVGTGLFALAPWVGFIFAAIVAWSGWKMLTSGGDNEEIT DYSEHWSVKITARLMPVFPRLYAERFFVNRAIVADLAKSDPTLKLAKNAAVFATPAFLCLMAIETSDVMFAFDSVPAVIA VTQEPLLVYAAMIFAVLGLRSLYFVLAAMTKYLVHLEKAVIVLLFFIAAKLTLQSGEHVFGWDFLHISPNVSLLIVLGTL AAGVIASFIWPAKEEKAE >Mature_337_residues AHFGFPIETIIIFFTVIGFSVFIDLFAHRHAKEISVRDASLWSCFWIGLALAFFAYLWLRFDKTWADLYLAGYALEKSLS IDNLIVFMAIFASFGIKGVLQHRILYWGIIGALVFRAIFVAVGTGLFALAPWVGFIFAAIVAWSGWKMLTSGGDNEEITD YSEHWSVKITARLMPVFPRLYAERFFVNRAIVADLAKSDPTLKLAKNAAVFATPAFLCLMAIETSDVMFAFDSVPAVIAV TQEPLLVYAAMIFAVLGLRSLYFVLAAMTKYLVHLEKAVIVLLFFIAAKLTLQSGEHVFGWDFLHISPNVSLLIVLGTLA AGVIASFIWPAKEEKAE
Specific function: Could conceivably alter the intracellular level of tellurium in a manner leading to resistance. Alternatively its presence in the membrane may provide a barrier to entry of the tellurium ions [H]
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=317, Percent_Identity=33.1230283911672, Blast_Score=154, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 37620; Mature: 37489
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFGFPIETIIIFFTVIGFSVFIDLFAHRHAKEISVRDASLWSCFWIGLALAFFAYLWL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RFDKTWADLYLAGYALEKSLSIDNLIVFMAIFASFGIKGVLQHRILYWGIIGALVFRAIF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VAVGTGLFALAPWVGFIFAAIVAWSGWKMLTSGGDNEEITDYSEHWSVKITARLMPVFPR HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCEEEEEEHHHHHHHHH LYAERFFVNRAIVADLAKSDPTLKLAKNAAVFATPAFLCLMAIETSDVMFAFDSVPAVIA HHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEE VTQEPLLVYAAMIFAVLGLRSLYFVLAAMTKYLVHLEKAVIVLLFFIAAKLTLQSGEHVF ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GWDFLHISPNVSLLIVLGTLAAGVIASFIWPAKEEKAE EEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AHFGFPIETIIIFFTVIGFSVFIDLFAHRHAKEISVRDASLWSCFWIGLALAFFAYLWL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RFDKTWADLYLAGYALEKSLSIDNLIVFMAIFASFGIKGVLQHRILYWGIIGALVFRAIF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VAVGTGLFALAPWVGFIFAAIVAWSGWKMLTSGGDNEEITDYSEHWSVKITARLMPVFPR HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCEEEEEEHHHHHHHHH LYAERFFVNRAIVADLAKSDPTLKLAKNAAVFATPAFLCLMAIETSDVMFAFDSVPAVIA HHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEE VTQEPLLVYAAMIFAVLGLRSLYFVLAAMTKYLVHLEKAVIVLLFFIAAKLTLQSGEHVF ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GWDFLHISPNVSLLIVLGTLAAGVIASFIWPAKEEKAE EEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]