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The map label for this gene is yfiB [C]

Identifier: 83592206

GI number: 83592206

Start: 1041568

End: 1042230

Strand: Reverse

Name: yfiB [C]

Synonym: Rru_A0870

Alternate gene names: 83592206

Gene position: 1042230-1041568 (Counterclockwise)

Preceding gene: 83592207

Following gene: 83592205

Centisome position: 23.94

GC content: 61.84

Gene sequence:

>663_bases
ATGAAGAAAACCGCCACCCGGATCGTTAAGCTCGTTGGCTTTTCTCTTGTCGTGGCGACGCCCCCTTCCACGGTCAAAGC
GGAAGACGTGCTTTTATATCGCAGCGTTCCCAGCGTCGATGAATTGCGCGATGTCTTGGTCCATTCCCAAAAGCCCCTCA
GCAAGGCCATCGTTTTTAGCACCCCGTCCGAGGACGCTTCCCCGCAAACGGCACCCGCCGCCGCCCCGGCGGCGGCGTCT
TCGACAAGCAAACCCGGCCGTCCTCCGGCCGTTCCCGCCAGCGCGGCTCATCACGCCCTCCCGGCGGCGGCAAGCGACAC
CCCAAAGCGCAAAACAGTGGGCCTCCCCATCCTGTTTGAAATCAACTCGGCGGAAATCCTGGTCAAATCCTTGCCCTATC
TCAACCAGATCGGGACCCTTCTTCGCGAGGAAAGCGCCCTGATCTTGGTCATCGAAGGGCATACCGACGCCAACGGACCC
TCCGACTATAATCTCGCCCTTTCCCGGAAACGGGCGGAGGCGGTCGCCGACTATCTCATCGGGTCTTTCGCTATCCCCCC
CGCGCGCCTCAGAACCGAGGGAAAAGGCGAAAGCGCCCTCTTGCGGCCCTCGTCCCCCACCCATCCCGACAATCGGAGAG
TCCAGTTCTACGCCGGAAGCTGA

Upstream 100 bases:

>100_bases
TAACCGAACACTCCTATAGCGGCCGCTAGAACCATTGGATGATTTGACTTTATTTGTTCACGGAAAATCAAGTCACCGAC
CTTGAAAAGGACCGTTCCCG

Downstream 100 bases:

>100_bases
CGCAAGCCCTCTCGTAAAGCGGGCTTTTCCGTATTAAAATACCACTAAGCGCATCCGTGGGGCTTCCCTCTTTCTTTACG
ACCAGACCAACCAGACCTCT

Product: OmpA/MotB

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Family Protein; OmpA/MotB; Ompa/Motb Domain Protein; Outer Membrane Protein OmpA/MotB Family; Outer Membrane Protein-Like Peptidoglycan-Associatedprotein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKKTATRIVKLVGFSLVVATPPSTVKAEDVLLYRSVPSVDELRDVLVHSQKPLSKAIVFSTPSEDASPQTAPAAAPAAAS
STSKPGRPPAVPASAAHHALPAAASDTPKRKTVGLPILFEINSAEILVKSLPYLNQIGTLLREESALILVIEGHTDANGP
SDYNLALSRKRAEAVADYLIGSFAIPPARLRTEGKGESALLRPSSPTHPDNRRVQFYAGS

Sequences:

>Translated_220_residues
MKKTATRIVKLVGFSLVVATPPSTVKAEDVLLYRSVPSVDELRDVLVHSQKPLSKAIVFSTPSEDASPQTAPAAAPAAAS
STSKPGRPPAVPASAAHHALPAAASDTPKRKTVGLPILFEINSAEILVKSLPYLNQIGTLLREESALILVIEGHTDANGP
SDYNLALSRKRAEAVADYLIGSFAIPPARLRTEGKGESALLRPSSPTHPDNRRVQFYAGS
>Mature_220_residues
MKKTATRIVKLVGFSLVVATPPSTVKAEDVLLYRSVPSVDELRDVLVHSQKPLSKAIVFSTPSEDASPQTAPAAAPAAAS
STSKPGRPPAVPASAAHHALPAAASDTPKRKTVGLPILFEINSAEILVKSLPYLNQIGTLLREESALILVIEGHTDANGP
SDYNLALSRKRAEAVADYLIGSFAIPPARLRTEGKGESALLRPSSPTHPDNRRVQFYAGS

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23229; Mature: 23229

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTATRIVKLVGFSLVVATPPSTVKAEDVLLYRSVPSVDELRDVLVHSQKPLSKAIVFS
CCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEE
TPSEDASPQTAPAAAPAAASSTSKPGRPPAVPASAAHHALPAAASDTPKRKTVGLPILFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCEEEEE
INSAEILVKSLPYLNQIGTLLREESALILVIEGHTDANGPSDYNLALSRKRAEAVADYLI
ECCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHH
GSFAIPPARLRTEGKGESALLRPSSPTHPDNRRVQFYAGS
HHCCCCHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKKTATRIVKLVGFSLVVATPPSTVKAEDVLLYRSVPSVDELRDVLVHSQKPLSKAIVFS
CCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEE
TPSEDASPQTAPAAAPAAASSTSKPGRPPAVPASAAHHALPAAASDTPKRKTVGLPILFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCEEEEE
INSAEILVKSLPYLNQIGTLLREESALILVIEGHTDANGPSDYNLALSRKRAEAVADYLI
ECCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHH
GSFAIPPARLRTEGKGESALLRPSSPTHPDNRRVQFYAGS
HHCCCCHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA