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The map label for this gene is 83592169

Identifier: 83592169

GI number: 83592169

Start: 987840

End: 988874

Strand: Direct

Name: 83592169

Synonym: Rru_A0833

Alternate gene names: NA

Gene position: 987840-988874 (Clockwise)

Preceding gene: 83592168

Following gene: 83592170

Centisome position: 22.69

GC content: 62.61

Gene sequence:

>1035_bases
ATGAAAAAGCTGTTGAACACCGTTTACGTCACCACCGAGGGAACGGGGTTGCGCAAGGACGGTGAAAATCTGGTCGCCGA
GCTTGACGGCGTGCAAAAGGGCCGGGTTCCCTTGCATATGGTGGGCTCTGTGGTGGTTTTTGGCGGCACCTATGTTTCGC
CCGGGCTAATGGGGGCTTGCGCCGCCCATGGCATCACCATCGTGCTGTTGGACCGGGTTGGTCGTTTTCAGGCGCGGGTC
GAGGGGCCGGTCGCCGGCAATGTGCTGCTGCGCCGCGCCCAATACAAAGCCTCCGAGGCGCCCGAGGATATCGTCAAAAG
CCTGATCTTGGGCAAAGTCTCCAATCAGCGGGCGGTTCTGCTGCGGGCGCTGCGCGATCACGGTGCCGATTTTCCGGCGG
CCGAAGCCTTGGCGGTGAAAGACGCCATCGATCGCATGGCCCATATCCTGCGCAAGGTCGGCGCCTCGGCCGAGGATGCC
GACCACCTGCGCGGCGCCGAAGGCGAGGCGGCCAGCCTTTATTTCGGGGTTTTTGGCCAGTTGATCCGCTCTCCCGATGG
CGATTTCGCCTTTCGTGGTCGCTCGCGCCGTCCGCCGCTCGATCCGACGAATGCCCTGCTGTCGTTTCTATATACCCTGT
TGACCCACGATTGCCGCAGTGCTTGCGAAAGTGTCGGACTTGATCCCGCCGTGGGATTTCTGCACCGCGATCGCCCGGGC
CGCCCGAGCCTCGCCCTTGATCTGATGGAAGAATTGCGGCCGGTTCTGGTTGATCGCTTGGCGTTGTCCTTGATCAATCG
CCGTCAGCTTCGGGCGACGGATTTCCAGCGCCTGGACGGCGGCGCCGTTCTTTTGACCGACGAGGCGCGCAAGACGGTGC
TAAGCGCTTGGCAGGAGCGCAAGAAACAGGAACGGCGCCATCCCTTTCTTGAGGAAAGCGCCCCGCTTGGCCTTGTGCCC
TATCTTCAGGCCCAGATGCTTGCCCGCCACCTGCGCGGGGATCTTGACGCCTATCCGCCGTGGTTCTGGAAGTAG

Upstream 100 bases:

>100_bases
TGATCGATCTCTGCCGACCAAAAGCCACGGCCAAACCGGCGCGGTCCTGGCGGCAGCGAACCTTGGCGTCGCTGCTGTCT
GACGAAGAGGGGACCGGGGC

Downstream 100 bases:

>100_bases
GATCCTCTCCCGATGATGATTCTTGTGACCTATGACGTGAACACGGTGGAGCCGGGCGGGCGGCGCCGGCTGCGACAGGT
CGCCAAGGCCTGCCAGGATT

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKKLLNTVYVTTEGTGLRKDGENLVAELDGVQKGRVPLHMVGSVVVFGGTYVSPGLMGACAAHGITIVLLDRVGRFQARV
EGPVAGNVLLRRAQYKASEAPEDIVKSLILGKVSNQRAVLLRALRDHGADFPAAEALAVKDAIDRMAHILRKVGASAEDA
DHLRGAEGEAASLYFGVFGQLIRSPDGDFAFRGRSRRPPLDPTNALLSFLYTLLTHDCRSACESVGLDPAVGFLHRDRPG
RPSLALDLMEELRPVLVDRLALSLINRRQLRATDFQRLDGGAVLLTDEARKTVLSAWQERKKQERRHPFLEESAPLGLVP
YLQAQMLARHLRGDLDAYPPWFWK

Sequences:

>Translated_344_residues
MKKLLNTVYVTTEGTGLRKDGENLVAELDGVQKGRVPLHMVGSVVVFGGTYVSPGLMGACAAHGITIVLLDRVGRFQARV
EGPVAGNVLLRRAQYKASEAPEDIVKSLILGKVSNQRAVLLRALRDHGADFPAAEALAVKDAIDRMAHILRKVGASAEDA
DHLRGAEGEAASLYFGVFGQLIRSPDGDFAFRGRSRRPPLDPTNALLSFLYTLLTHDCRSACESVGLDPAVGFLHRDRPG
RPSLALDLMEELRPVLVDRLALSLINRRQLRATDFQRLDGGAVLLTDEARKTVLSAWQERKKQERRHPFLEESAPLGLVP
YLQAQMLARHLRGDLDAYPPWFWK
>Mature_344_residues
MKKLLNTVYVTTEGTGLRKDGENLVAELDGVQKGRVPLHMVGSVVVFGGTYVSPGLMGACAAHGITIVLLDRVGRFQARV
EGPVAGNVLLRRAQYKASEAPEDIVKSLILGKVSNQRAVLLRALRDHGADFPAAEALAVKDAIDRMAHILRKVGASAEDA
DHLRGAEGEAASLYFGVFGQLIRSPDGDFAFRGRSRRPPLDPTNALLSFLYTLLTHDCRSACESVGLDPAVGFLHRDRPG
RPSLALDLMEELRPVLVDRLALSLINRRQLRATDFQRLDGGAVLLTDEARKTVLSAWQERKKQERRHPFLEESAPLGLVP
YLQAQMLARHLRGDLDAYPPWFWK

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 37851; Mature: 37851

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLNTVYVTTEGTGLRKDGENLVAELDGVQKGRVPLHMVGSVVVFGGTYVSPGLMGAC
CCCHHCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEECCCHHCCHHHHHH
AAHGITIVLLDRVGRFQARVEGPVAGNVLLRRAQYKASEAPEDIVKSLILGKVSNQRAVL
HHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH
LRALRDHGADFPAAEALAVKDAIDRMAHILRKVGASAEDADHLRGAEGEAASLYFGVFGQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHH
LIRSPDGDFAFRGRSRRPPLDPTNALLSFLYTLLTHDCRSACESVGLDPAVGFLHRDRPG
HHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
RPSLALDLMEELRPVLVDRLALSLINRRQLRATDFQRLDGGAVLLTDEARKTVLSAWQER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH
KKQERRHPFLEESAPLGLVPYLQAQMLARHLRGDLDAYPPWFWK
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKLLNTVYVTTEGTGLRKDGENLVAELDGVQKGRVPLHMVGSVVVFGGTYVSPGLMGAC
CCCHHCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEECCCHHCCHHHHHH
AAHGITIVLLDRVGRFQARVEGPVAGNVLLRRAQYKASEAPEDIVKSLILGKVSNQRAVL
HHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH
LRALRDHGADFPAAEALAVKDAIDRMAHILRKVGASAEDADHLRGAEGEAASLYFGVFGQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHH
LIRSPDGDFAFRGRSRRPPLDPTNALLSFLYTLLTHDCRSACESVGLDPAVGFLHRDRPG
HHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
RPSLALDLMEELRPVLVDRLALSLINRRQLRATDFQRLDGGAVLLTDEARKTVLSAWQER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH
KKQERRHPFLEESAPLGLVPYLQAQMLARHLRGDLDAYPPWFWK
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]